RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 PRAMEF13Q5VWM6 474 aa5.63□□□□□ -1.51
PTPRK-210ENST00000415055 OVOS1Q6IE37 1185 aa5.63□□□□□ -1.51
PTPRK-210ENST00000415055 KSR2Q6VAB6 950 aa5.63□□□□□ -1.51
PTPRK-210ENST00000415055 LDHAL6AQ6ZMR3 332 aa5.63□□□□□ -1.51
PTPRK-210ENST00000415055 C15orf52Q6ZUT6 534 aaKnown RBP5.63□□□□□ -1.51
PTPRK-210ENST00000415055 FAM83AQ86UY5 434 aa5.63□□□□□ -1.51
PTPRK-210ENST00000415055 MICAL1Q8TDZ2 1067 aa5.63□□□□□ -1.51
PTPRK-210ENST00000415055 ACSF2Q96CM8 615 aaPredicted RBP5.63□□□□□ -1.51
PTPRK-210ENST00000415055 DIRC2Q96SL1 478 aa5.63□□□□□ -1.51
PTPRK-210ENST00000415055 STK31Q9BXU1 1019 aa5.63□□□□□ -1.51
PTPRK-210ENST00000415055 CNNM2Q9H8M5 875 aa5.63□□□□□ -1.51
PTPRK-210ENST00000415055 SLAMF8Q9P0V8 285 aa5.63□□□□□ -1.51
PTPRK-210ENST00000415055 ZSWIM5Q9P217 1185 aa5.63□□□□□ -1.51
PTPRK-210ENST00000415055 TJP2Q9UDY2 1190 aa5.63□□□□□ -1.51
PTPRK-210ENST00000415055 ZMYM5Q9UJ78 669 aa5.63□□□□□ -1.51
PTPRK-210ENST00000415055 ZHX2Q9Y6X8 837 aa5.63□□□□□ -1.51
PTPRK-210ENST00000415055 PLXNB2O15031 1838 aa5.62□□□□□ -1.51
PTPRK-210ENST00000415055 PHIPQ8WWQ0 1821 aa5.62□□□□□ -1.51
PTPRK-210ENST00000415055 TRIM75PA6NK02 468 aa5.62□□□□□ -1.51
PTPRK-210ENST00000415055 SLC22A31A6NKX4 558 aa5.62□□□□□ -1.51
PTPRK-210ENST00000415055 AGRPO00253 132 aa5.62□□□□□ -1.51
PTPRK-210ENST00000415055 CXCL11O14625 94 aa5.62□□□□□ -1.51
PTPRK-210ENST00000415055 RFPL3O75679 317 aa5.62□□□□□ -1.51
PTPRK-210ENST00000415055 KRT1P04264 644 aa5.62□□□□□ -1.51
PTPRK-210ENST00000415055 ZSCAN22P10073 491 aaPredicted RBP5.62□□□□□ -1.51
PTPRK-210ENST00000415055 RAC2P15153 192 aa5.62□□□□□ -1.51
PTPRK-210ENST00000415055 NME1P15531 152 aaKnown RBP5.62□□□□□ -1.51
PTPRK-210ENST00000415055 CYP2B6P20813 491 aa5.62□□□□□ -1.51
PTPRK-210ENST00000415055 ZEB1P37275 1124 aaPredicted RBP5.62□□□□□ -1.51
PTPRK-210ENST00000415055 SSRP1Q08945 709 aaKnown RBP5.62□□□□□ -1.51
PTPRK-210ENST00000415055 MOGSQ13724 837 aa5.62□□□□□ -1.51
PTPRK-210ENST00000415055 GCKRQ14397 625 aa5.62□□□□□ -1.51
PTPRK-210ENST00000415055 CCDC57Q2TAC2 916 aa5.62□□□□□ -1.51
PTPRK-210ENST00000415055 LCNL1Q6ZST4 164 aa5.62□□□□□ -1.51
PTPRK-210ENST00000415055 FAM13CQ8NE31 585 aa5.62□□□□□ -1.51
PTPRK-210ENST00000415055 TDRD7Q8NHU6 1098 aaKnown RBP5.62□□□□□ -1.51
PTPRK-210ENST00000415055 ABHD4Q8TB40 342 aa5.62□□□□□ -1.51
PTPRK-210ENST00000415055 DHRS1Q96LJ7 313 aa5.62□□□□□ -1.51
PTPRK-210ENST00000415055 SENP6Q9GZR1 1112 aaPredicted RBP5.62□□□□□ -1.51
PTPRK-210ENST00000415055 MYH16Q9H6N6 1097 aa5.62□□□□□ -1.51
PTPRK-210ENST00000415055 PFASO15067 1338 aa5.62□□□□□ -1.51
PTPRK-210ENST00000415055 MAST2Q6P0Q8 1798 aa5.62□□□□□ -1.51
PTPRK-210ENST00000415055 LTBP2Q14767 1821 aa5.62□□□□□ -1.51
PTPRK-210ENST00000415055 ATAD5Q96QE3 1844 aa5.62□□□□□ -1.51
PTPRK-210ENST00000415055 PLXNA1Q9UIW2 1896 aa5.62□□□□□ -1.51
PTPRK-210ENST00000415055 A0A0G2JLL6 359 aaPredicted RBP5.61□□□□□ -1.51
PTPRK-210ENST00000415055 SMCHD1A6NHR9 2005 aa5.61□□□□□ -1.51
PTPRK-210ENST00000415055 KRTAP9-7A8MTY7 169 aa5.61□□□□□ -1.51
PTPRK-210ENST00000415055 MAST3O60307 1309 aa5.61□□□□□ -1.51
PTPRK-210ENST00000415055 CSF1RP07333 972 aa5.61□□□□□ -1.51
PTPRK-210ENST00000415055 TMEM253P0C7T8 217 aa5.61□□□□□ -1.51
PTPRK-210ENST00000415055 POLR2BP30876 1174 aaKnown RBP5.61□□□□□ -1.51
PTPRK-210ENST00000415055 MASP1P48740 699 aa5.61□□□□□ -1.51
PTPRK-210ENST00000415055 TNK2Q07912 1038 aa5.61□□□□□ -1.51
PTPRK-210ENST00000415055 WDR43Q15061 677 aaKnown RBP eCLIP5.61□□□□□ -1.51
PTPRK-210ENST00000415055 SHHQ15465 462 aa5.61□□□□□ -1.51
PTPRK-210ENST00000415055 FKBP1CQ5VVH2 108 aa5.61□□□□□ -1.51
PTPRK-210ENST00000415055 C6orf15Q6UXA7 325 aaPredicted RBP5.61□□□□□ -1.51
PTPRK-210ENST00000415055 NLRC3Q7RTR2 1065 aa5.61□□□□□ -1.51
PTPRK-210ENST00000415055 TMPRSS7Q7RTY8 843 aa5.61□□□□□ -1.51
PTPRK-210ENST00000415055 PRRT2Q7Z6L0 340 aaPredicted RBP5.61□□□□□ -1.51
PTPRK-210ENST00000415055 CCAR1Q8IX12 1150 aaKnown RBP5.61□□□□□ -1.51
PTPRK-210ENST00000415055 C8orf58Q8NAV2 365 aa5.61□□□□□ -1.51
PTPRK-210ENST00000415055 TBC1D22AQ8WUA7 517 aa5.61□□□□□ -1.51
PTPRK-210ENST00000415055 RUNDC1Q96C34 613 aa5.61□□□□□ -1.51
PTPRK-210ENST00000415055 ATG4CQ96DT6 458 aa5.61□□□□□ -1.51
PTPRK-210ENST00000415055 TMEM87BQ96K49 555 aa5.61□□□□□ -1.51
PTPRK-210ENST00000415055 FAM84BQ96KN1 310 aaPredicted RBP5.61□□□□□ -1.51
PTPRK-210ENST00000415055 ZDHHC15Q96MV8 337 aa5.61□□□□□ -1.51
PTPRK-210ENST00000415055 PLA2G12BQ9BX93 195 aa5.61□□□□□ -1.51
PTPRK-210ENST00000415055 CHMP4AQ9BY43 222 aa5.61□□□□□ -1.51
PTPRK-210ENST00000415055 KRTAP4-2Q9BYR5 136 aa5.61□□□□□ -1.51
PTPRK-210ENST00000415055 CWC22Q9HCG8 908 aaKnown RBP5.61□□□□□ -1.51
PTPRK-210ENST00000415055 DCP1AQ9NPI6 582 aaPredicted RBP5.61□□□□□ -1.51
PTPRK-210ENST00000415055 BRWD1Q9NSI6 2320 aa5.61□□□□□ -1.51
PTPRK-210ENST00000415055 OGDHLQ9ULD0 1010 aa5.61□□□□□ -1.51
PTPRK-210ENST00000415055 ATP11BQ9Y2G3 1177 aa5.61□□□□□ -1.51
PTPRK-210ENST00000415055 LRRFIP2Q9Y608 721 aaKnown RBP5.61□□□□□ -1.51
PTPRK-210ENST00000415055 CDK5RAP2Q96SN8 1893 aa5.6□□□□□ -1.51
PTPRK-210ENST00000415055 RPAP1Q9BWH6 1393 aaPredicted RBP5.6□□□□□ -1.51
PTPRK-210ENST00000415055 RBAK-RBAKDNI3L0D1 243 aa5.6□□□□□ -1.51
PTPRK-210ENST00000415055 ZKSCAN1P17029 563 aaPredicted RBP5.6□□□□□ -1.51
PTPRK-210ENST00000415055 GNAI1P63096 354 aa5.6□□□□□ -1.51
PTPRK-210ENST00000415055 UBE4AQ14139 1066 aa5.6□□□□□ -1.51
PTPRK-210ENST00000415055 FAM110CQ1W6H9 321 aa5.6□□□□□ -1.51
PTPRK-210ENST00000415055 CAVIN4Q5BKX8 364 aa5.6□□□□□ -1.51
PTPRK-210ENST00000415055 NOL9Q5SY16 702 aaKnown RBP5.6□□□□□ -1.51
PTPRK-210ENST00000415055 C9orf50Q5SZB4 431 aa5.6□□□□□ -1.51
PTPRK-210ENST00000415055 APOBEC3HQ6NTF7 200 aaKnown RBP5.6□□□□□ -1.51
PTPRK-210ENST00000415055 VHLLQ6RSH7 139 aa5.6□□□□□ -1.51
PTPRK-210ENST00000415055 LMBR1LQ6UX01 489 aa5.6□□□□□ -1.51
PTPRK-210ENST00000415055 UNC5AQ6ZN44 842 aa5.6□□□□□ -1.51
PTPRK-210ENST00000415055 NOL8Q76FK4 1167 aaKnown RBP5.6□□□□□ -1.51
PTPRK-210ENST00000415055 CDH24Q86UP0 819 aa5.6□□□□□ -1.51
PTPRK-210ENST00000415055 MCATQ8IVS2 390 aaKnown RBP5.6□□□□□ -1.51
PTPRK-210ENST00000415055 PHACTR4Q8IZ21 702 aa5.6□□□□□ -1.51
PTPRK-210ENST00000415055 SCYL3Q8IZE3 742 aa5.6□□□□□ -1.51
PTPRK-210ENST00000415055 USP38Q8NB14 1042 aa5.6□□□□□ -1.51
PTPRK-210ENST00000415055 PIWIL2Q8TC59 973 aaKnown RBP5.6□□□□□ -1.51
PTPRK-210ENST00000415055 FAM151AQ8WW52 585 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms