RNA–Protein interactions for RNA: ENST00000414883.1

A1CF-208, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5

Gene A1CF, Length 885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-208ENST00000414883 ANKEF1Q9NU02 776 aa12.21□□□□□ -0.45
A1CF-208ENST00000414883 HCSTQ9UBK5 93 aa12.21□□□□□ -0.45
A1CF-208ENST00000414883 COL4A3BPQ9Y5P4 624 aa12.21□□□□□ -0.45
A1CF-208ENST00000414883 DENND3A2RUS2 1198 aa12.2□□□□□ -0.46
A1CF-208ENST00000414883 GRM6O15303 877 aa12.2□□□□□ -0.46
A1CF-208ENST00000414883 GTPBP6O43824 516 aaPredicted RBP12.2□□□□□ -0.46
A1CF-208ENST00000414883 STAG3L1P0CL83 205 aa12.2□□□□□ -0.46
A1CF-208ENST00000414883 FGFR1P11362 822 aa12.2□□□□□ -0.46
A1CF-208ENST00000414883 DNAJB1P25685 340 aa12.2□□□□□ -0.46
A1CF-208ENST00000414883 CTNNB1P35222 781 aa12.2□□□□□ -0.46
A1CF-208ENST00000414883 TECP42680 631 aa12.2□□□□□ -0.46
A1CF-208ENST00000414883 DNM2P50570 870 aa12.2□□□□□ -0.46
A1CF-208ENST00000414883 CDC42EP1Q00587 391 aa12.2□□□□□ -0.46
A1CF-208ENST00000414883 LAMTOR4Q0VGL1 99 aa12.2□□□□□ -0.46
A1CF-208ENST00000414883 BTG3Q14201 252 aaPredicted RBP12.2□□□□□ -0.46
A1CF-208ENST00000414883 PAN2Q504Q3 1202 aaKnown RBP12.2□□□□□ -0.46
A1CF-208ENST00000414883 XKR9Q5GH70 373 aa12.2□□□□□ -0.46
A1CF-208ENST00000414883 ODR4Q5SWX8 454 aa12.2□□□□□ -0.46
A1CF-208ENST00000414883 OTUD6AQ7L8S5 288 aa12.2□□□□□ -0.46
A1CF-208ENST00000414883 ECHDC2Q86YB7 292 aa12.2□□□□□ -0.46
A1CF-208ENST00000414883 IGSF22Q8N9C0 903 aa12.2□□□□□ -0.46
A1CF-208ENST00000414883 SLC7A3Q8WY07 619 aa12.2□□□□□ -0.46
A1CF-208ENST00000414883 MRPL38Q96DV4 380 aaKnown RBP12.2□□□□□ -0.46
A1CF-208ENST00000414883 JPH2Q9BR39 696 aaPredicted RBP12.2□□□□□ -0.46
A1CF-208ENST00000414883 POLR3CQ9BUI4 534 aaPredicted RBP12.2□□□□□ -0.46
A1CF-208ENST00000414883 TRAIPQ9BWF2 469 aa12.2□□□□□ -0.46
A1CF-208ENST00000414883 GCOM2Q9BZD3 368 aaPredicted RBP12.2□□□□□ -0.46
A1CF-208ENST00000414883 ELAC1Q9H777 363 aaKnown RBP12.2□□□□□ -0.46
A1CF-208ENST00000414883 TUFT1Q9NNX1 390 aa12.2□□□□□ -0.46
A1CF-208ENST00000414883 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.2□□□□□ -0.46
A1CF-208ENST00000414883 BMP2KQ9NSY1 1161 aaPredicted RBP12.2□□□□□ -0.46
A1CF-208ENST00000414883 TMEM161AQ9NX61 479 aa12.2□□□□□ -0.46
A1CF-208ENST00000414883 A0A0U1RQF3 1178 aa12.19□□□□□ -0.46
A1CF-208ENST00000414883 DLL1O00548 723 aa12.19□□□□□ -0.46
A1CF-208ENST00000414883 GAS2O43903 313 aaKnown RBP12.19□□□□□ -0.46
A1CF-208ENST00000414883 RB1P06400 928 aa12.19□□□□□ -0.46
A1CF-208ENST00000414883 XRCC6P12956 609 aaKnown RBP eCLIP12.19□□□□□ -0.46
A1CF-208ENST00000414883 RPA1P27694 616 aa12.19□□□□□ -0.46
A1CF-208ENST00000414883 HOXA11P31270 313 aaPredicted RBP12.19□□□□□ -0.46
A1CF-208ENST00000414883 ARL2P36404 184 aa12.19□□□□□ -0.46
A1CF-208ENST00000414883 POLGP54098 1239 aaPredicted RBP12.19□□□□□ -0.46
A1CF-208ENST00000414883 TFF2Q03403 129 aa12.19□□□□□ -0.46
A1CF-208ENST00000414883 PTGDRQ13258 359 aa12.19□□□□□ -0.46
A1CF-208ENST00000414883 GPM6BQ13491 265 aa12.19□□□□□ -0.46
A1CF-208ENST00000414883 COL19A1Q14993 1142 aa12.19□□□□□ -0.46
A1CF-208ENST00000414883 CLLU1OSQ5K130 101 aa12.19□□□□□ -0.46
A1CF-208ENST00000414883 LRRC55Q6ZSA7 311 aa12.19□□□□□ -0.46
A1CF-208ENST00000414883 FERMT3Q86UX7 667 aa12.19□□□□□ -0.46
A1CF-208ENST00000414883 ASAP3Q8TDY4 903 aa12.19□□□□□ -0.46
A1CF-208ENST00000414883 ATXN2LQ8WWM7 1075 aaKnown RBP12.19□□□□□ -0.46
A1CF-208ENST00000414883 PSPC1Q8WXF1 523 aaKnown RBP12.19□□□□□ -0.46
A1CF-208ENST00000414883 NLRP4Q96MN2 994 aa12.19□□□□□ -0.46
A1CF-208ENST00000414883 CASD1Q96PB1 797 aa12.19□□□□□ -0.46
A1CF-208ENST00000414883 CWH43Q9H720 699 aa12.19□□□□□ -0.46
A1CF-208ENST00000414883 THEGQ9P2T0 379 aa12.19□□□□□ -0.46
A1CF-208ENST00000414883 PCDHB7Q9Y5E2 793 aa12.19□□□□□ -0.46
A1CF-208ENST00000414883 MEIS3P2A8K0S8 358 aa12.18□□□□□ -0.46
A1CF-208ENST00000414883 ITGB1P05556 798 aa12.18□□□□□ -0.46
A1CF-208ENST00000414883 AMHR2Q16671 573 aa12.18□□□□□ -0.46
A1CF-208ENST00000414883 POTEGQ6S5H5 508 aa12.18□□□□□ -0.46
A1CF-208ENST00000414883 EXOC8Q8IYI6 725 aa12.18□□□□□ -0.46
A1CF-208ENST00000414883 ASB2Q96Q27 587 aa12.18□□□□□ -0.46
A1CF-208ENST00000414883 MMTAG2Q9BU76 263 aaKnown RBP12.18□□□□□ -0.46
A1CF-208ENST00000414883 PLVAPQ9BX97 442 aa12.18□□□□□ -0.46
A1CF-208ENST00000414883 CHST12Q9NRB3 414 aa12.18□□□□□ -0.46
A1CF-208ENST00000414883 TYW1Q9NV66 732 aaKnown RBP12.18□□□□□ -0.46
A1CF-208ENST00000414883 DBR1Q9UK59 544 aaKnown RBP12.18□□□□□ -0.46
A1CF-208ENST00000414883 LRFN2Q9ULH4 789 aa12.18□□□□□ -0.46
A1CF-208ENST00000414883 PLAGL2Q9UPG8 496 aa12.18□□□□□ -0.46
A1CF-208ENST00000414883 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.17□□□□□ -0.46
A1CF-208ENST00000414883 TBKBP1A7MCY6 615 aa12.17□□□□□ -0.46
A1CF-208ENST00000414883 PP2D1A8MPX8 630 aa12.17□□□□□ -0.46
A1CF-208ENST00000414883 DGAT1O75907 488 aa12.17□□□□□ -0.46
A1CF-208ENST00000414883 SRGAP2CP0DJJ0 459 aa12.17□□□□□ -0.46
A1CF-208ENST00000414883 IBSPP21815 317 aaPredicted RBP12.17□□□□□ -0.46
A1CF-208ENST00000414883 GLRA2P23416 452 aa12.17□□□□□ -0.46
A1CF-208ENST00000414883 PRPHP41219 470 aa12.17□□□□□ -0.46
A1CF-208ENST00000414883 PHKA2P46019 1235 aa12.17□□□□□ -0.46
A1CF-208ENST00000414883 PTENP60484 403 aa12.17□□□□□ -0.46
A1CF-208ENST00000414883 CAPSQ13938 189 aa12.17□□□□□ -0.46
A1CF-208ENST00000414883 PDIA5Q14554 519 aa12.17□□□□□ -0.46
A1CF-208ENST00000414883 UBXN11Q5T124 520 aa12.17□□□□□ -0.46
A1CF-208ENST00000414883 SRGAP1Q7Z6B7 1085 aa12.17□□□□□ -0.46
A1CF-208ENST00000414883 KLHL23Q8NBE8 558 aa12.17□□□□□ -0.46
A1CF-208ENST00000414883 SPPL3Q8TCT6 385 aa12.17□□□□□ -0.46
A1CF-208ENST00000414883 TCP11Q8WWU5 503 aa12.17□□□□□ -0.46
A1CF-208ENST00000414883 P2RX5Q93086 422 aa12.17□□□□□ -0.46
A1CF-208ENST00000414883 SCLT1Q96NL6 688 aa12.17□□□□□ -0.46
A1CF-208ENST00000414883 MTRQ99707 1265 aa12.17□□□□□ -0.46
A1CF-208ENST00000414883 C11orf84Q9BUA3 381 aaPredicted RBP12.17□□□□□ -0.46
A1CF-208ENST00000414883 ATP6V0A4Q9HBG4 840 aa12.17□□□□□ -0.46
A1CF-208ENST00000414883 ALG13Q9NP73 1137 aaKnown RBP12.17□□□□□ -0.46
A1CF-208ENST00000414883 GPRC5CQ9NQ84 441 aa12.17□□□□□ -0.46
A1CF-208ENST00000414883 AGPAT5Q9NUQ2 364 aa12.17□□□□□ -0.46
A1CF-208ENST00000414883 NOL7Q9UMY1 257 aaKnown RBP12.17□□□□□ -0.46
A1CF-208ENST00000414883 SMC3Q9UQE7 1217 aa12.17□□□□□ -0.46
A1CF-208ENST00000414883 RWDD3Q9Y3V2 267 aa12.17□□□□□ -0.46
A1CF-208ENST00000414883 KIF3AQ9Y496 699 aa12.17□□□□□ -0.46
A1CF-208ENST00000414883 GTF3C3Q9Y5Q9 886 aa12.17□□□□□ -0.46
A1CF-208ENST00000414883 ASAP2O43150 1006 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms