RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 TAP1Q03518 808 aa28.09■■■□□ 2.09
CPNE1-207ENST00000414664 CEBPZQ03701 1054 aaKnown RBP28.09■■■□□ 2.09
CPNE1-207ENST00000414664 DSC3Q14574 896 aa28.09■■■□□ 2.09
CPNE1-207ENST00000414664 GRIN2CQ14957 1233 aa28.09■■■□□ 2.09
CPNE1-207ENST00000414664 CATSPER4Q7RTX7 472 aa28.09■■■□□ 2.09
CPNE1-207ENST00000414664 CABP7Q86V35 215 aa28.09■■■□□ 2.09
CPNE1-207ENST00000414664 GUCD1Q96NT3 240 aa28.09■■■□□ 2.09
CPNE1-207ENST00000414664 CDX2Q99626 313 aaPredicted RBP28.09■■■□□ 2.09
CPNE1-207ENST00000414664 POLR3FQ9H1D9 316 aaPredicted RBP28.09■■■□□ 2.09
CPNE1-207ENST00000414664 DACT1Q9NYF0 836 aa28.09■■■□□ 2.09
CPNE1-207ENST00000414664 LCHNA4D1U4 455 aa28.08■■■□□ 2.09
CPNE1-207ENST00000414664 CSDE1O75534 798 aaKnown RBP28.08■■■□□ 2.09
CPNE1-207ENST00000414664 FGFR4P22455 802 aa28.08■■■□□ 2.09
CPNE1-207ENST00000414664 FAM102BQ5T8I3 360 aa28.08■■■□□ 2.09
CPNE1-207ENST00000414664 MAEAQ7L5Y9 396 aa28.08■■■□□ 2.09
CPNE1-207ENST00000414664 SP7Q8TDD2 431 aaPredicted RBP28.08■■■□□ 2.09
CPNE1-207ENST00000414664 CALML4Q96GE6 196 aa28.08■■■□□ 2.09
CPNE1-207ENST00000414664 USP28Q96RU2 1077 aa28.08■■■□□ 2.09
CPNE1-207ENST00000414664 PCDHB7Q9Y5E2 793 aa28.08■■■□□ 2.09
CPNE1-207ENST00000414664 MORC2Q9Y6X9 1032 aaPredicted RBP28.08■■■□□ 2.09
CPNE1-207ENST00000414664 C9IYK1 514 aa28.07■■■□□ 2.08
CPNE1-207ENST00000414664 E9PMD0 336 aa28.07■■■□□ 2.08
CPNE1-207ENST00000414664 PCBP1Q15365 356 aaKnown RBP eCLIP28.07■■■□□ 2.082e-19■□□□□ 8.2
CPNE1-207ENST00000414664 ASAP3Q8TDY4 903 aa28.07■■■□□ 2.08
CPNE1-207ENST00000414664 LINC01553A4QN01 128 aa28.06■■■□□ 2.08
CPNE1-207ENST00000414664 DGKIO75912 1065 aa28.06■■■□□ 2.08
CPNE1-207ENST00000414664 F13A1P00488 732 aa28.06■■■□□ 2.08
CPNE1-207ENST00000414664 GLRA2P23416 452 aa28.06■■■□□ 2.08
CPNE1-207ENST00000414664 MARCKSP29966 332 aaPredicted RBP28.06■■■□□ 2.08
CPNE1-207ENST00000414664 PTENP60484 403 aa28.06■■■□□ 2.08
CPNE1-207ENST00000414664 FAM189BP81408 668 aa28.06■■■□□ 2.08
CPNE1-207ENST00000414664 SLC39A14Q15043 492 aa28.06■■■□□ 2.08
CPNE1-207ENST00000414664 FOXD4L5Q5VV16 416 aaPredicted RBP28.06■■■□□ 2.08
CPNE1-207ENST00000414664 IFNLR1Q8IU57 520 aaPredicted RBP28.06■■■□□ 2.08
CPNE1-207ENST00000414664 CRIPAKQ8N1N5 446 aa28.06■■■□□ 2.08
CPNE1-207ENST00000414664 FOXD4L4Q8WXT5 416 aaPredicted RBP28.06■■■□□ 2.08
CPNE1-207ENST00000414664 PNMA5Q96PV4 448 aa28.06■■■□□ 2.08
CPNE1-207ENST00000414664 ELAC1Q9H777 363 aaKnown RBP28.06■■■□□ 2.08
CPNE1-207ENST00000414664 SRPRBQ9Y5M8 271 aaKnown RBP28.06■■■□□ 2.08
CPNE1-207ENST00000414664 CAPSQ13938 189 aa28.05■■■□□ 2.08
CPNE1-207ENST00000414664 RASSF8Q8NHQ8 419 aa28.05■■■□□ 2.08
CPNE1-207ENST00000414664 TGS1Q96RS0 853 aaKnown RBP28.05■■■□□ 2.08
CPNE1-207ENST00000414664 GAS2L1Q99501 681 aaPredicted RBP28.05■■■□□ 2.08
CPNE1-207ENST00000414664 NFKBIZQ9BYH8 718 aa28.05■■■□□ 2.08
CPNE1-207ENST00000414664 GPRC5CQ9NQ84 441 aa28.05■■■□□ 2.08
CPNE1-207ENST00000414664 TMEM161AQ9NX61 479 aa28.05■■■□□ 2.08
CPNE1-207ENST00000414664 STXBP5LQ9Y2K9 1186 aa28.05■■■□□ 2.08
CPNE1-207ENST00000414664 IBSPP21815 317 aaPredicted RBP28.04■■■□□ 2.08
CPNE1-207ENST00000414664 NASPP49321 788 aaPredicted RBP28.04■■■□□ 2.08
CPNE1-207ENST00000414664 NCBP1Q09161 790 aaKnown RBP28.04■■■□□ 2.08
CPNE1-207ENST00000414664 GRB10Q13322 594 aa28.04■■■□□ 2.08
CPNE1-207ENST00000414664 PPP2R5AQ15172 486 aa28.04■■■□□ 2.08
CPNE1-207ENST00000414664 STK38Q15208 465 aa28.04■■■□□ 2.08
CPNE1-207ENST00000414664 FIBCD1Q8N539 461 aa28.04■■■□□ 2.08
CPNE1-207ENST00000414664 MYLIPQ8WY64 445 aa28.04■■■□□ 2.08
CPNE1-207ENST00000414664 KIFAP3Q92845 792 aa28.04■■■□□ 2.08
CPNE1-207ENST00000414664 ZNF689Q96CS4 500 aaPredicted RBP28.04■■■□□ 2.08
CPNE1-207ENST00000414664 PLIN2Q99541 437 aa28.04■■■□□ 2.08
CPNE1-207ENST00000414664 PRDM12Q9H4Q4 367 aa28.04■■■□□ 2.08
CPNE1-207ENST00000414664 FBXO2Q9UK22 296 aaPredicted RBP28.04■■■□□ 2.08
CPNE1-207ENST00000414664 PIN4Q9Y237 131 aaKnown RBP28.04■■■□□ 2.08
CPNE1-207ENST00000414664 ADGRA3Q8IWK6 1321 aa28.03■■■□□ 2.08
CPNE1-207ENST00000414664 ERLIN2O94905 339 aa28.03■■■□□ 2.08
CPNE1-207ENST00000414664 ARHGEF15O94989 841 aa28.03■■■□□ 2.08
CPNE1-207ENST00000414664 SKIP12755 728 aa28.03■■■□□ 2.08
CPNE1-207ENST00000414664 ERVK-21P61565 698 aa28.03■■■□□ 2.08
CPNE1-207ENST00000414664 GRIN1Q05586 938 aa28.03■■■□□ 2.08
CPNE1-207ENST00000414664 TMEM119Q4V9L6 283 aa28.03■■■□□ 2.08
CPNE1-207ENST00000414664 KCNK18Q7Z418 384 aa28.03■■■□□ 2.08
CPNE1-207ENST00000414664 ARNTL2Q8WYA1 636 aa28.03■■■□□ 2.08
CPNE1-207ENST00000414664 SAMD11Q96NU1 681 aa28.03■■■□□ 2.08
CPNE1-207ENST00000414664 CCSER1Q9C0I3 900 aa28.03■■■□□ 2.08
CPNE1-207ENST00000414664 CSRNP2Q9H175 543 aa28.03■■■□□ 2.08
CPNE1-207ENST00000414664 MINDY3Q9H8M7 445 aa28.03■■■□□ 2.08
CPNE1-207ENST00000414664 CERS4Q9HA82 394 aa28.03■■■□□ 2.08
CPNE1-207ENST00000414664 AGPAT5Q9NUQ2 364 aa28.03■■■□□ 2.08
CPNE1-207ENST00000414664 A0A0U1RQF3 1178 aa28.02■■■□□ 2.08
CPNE1-207ENST00000414664 LRRIQ4A6NIV6 560 aa28.02■■■□□ 2.08
CPNE1-207ENST00000414664 INO80B-WBP1J3KQ70 363 aa28.02■■■□□ 2.08
CPNE1-207ENST00000414664 BTG3Q14201 252 aaPredicted RBP28.02■■■□□ 2.08
CPNE1-207ENST00000414664 ATL3Q6DD88 541 aa28.02■■■□□ 2.08
CPNE1-207ENST00000414664 TWF2Q6IBS0 349 aaKnown RBP28.02■■■□□ 2.08
CPNE1-207ENST00000414664 ZBTB8OSQ8IWT0 167 aa28.02■■■□□ 2.08
CPNE1-207ENST00000414664 KRI1Q8N9T8 703 aaKnown RBP28.02■■■□□ 2.08
CPNE1-207ENST00000414664 IFT74Q96LB3 600 aa28.02■■■□□ 2.08
CPNE1-207ENST00000414664 TIPINQ9BVW5 301 aa28.02■■■□□ 2.08
CPNE1-207ENST00000414664 TRAIPQ9BWF2 469 aa28.02■■■□□ 2.08
CPNE1-207ENST00000414664 RC3H2Q9HBD1 1191 aaKnown RBP28.02■■■□□ 2.08
CPNE1-207ENST00000414664 COL4A6Q14031 1691 aa28.02■■■□□ 2.08
CPNE1-207ENST00000414664 HOXA2O43364 376 aa28.01■■■□□ 2.07
CPNE1-207ENST00000414664 EOMESO95936 686 aa28.01■■■□□ 2.07
CPNE1-207ENST00000414664 SSBP05455 408 aaKnown RBP eCLIP28.01■■■□□ 2.07
CPNE1-207ENST00000414664 FOSL2P15408 326 aa28.01■■■□□ 2.07
CPNE1-207ENST00000414664 AXLP30530 894 aa28.01■■■□□ 2.07
CPNE1-207ENST00000414664 TXLNAP40222 546 aa28.01■■■□□ 2.07
CPNE1-207ENST00000414664 RINT1Q6NUQ1 792 aa28.01■■■□□ 2.07
CPNE1-207ENST00000414664 ECHDC2Q86YB7 292 aa28.01■■■□□ 2.07
CPNE1-207ENST00000414664 CMTR2Q8IYT2 770 aaKnown RBP28.01■■■□□ 2.07
CPNE1-207ENST00000414664 SYT2Q8N9I0 419 aaPredicted RBP28.01■■■□□ 2.07
CPNE1-207ENST00000414664 LINC00301Q8NCQ3 95 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms