RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 NSUN3Q9H649 340 aaKnown RBP18.86■□□□□ 0.61
SCAMP4-204ENST00000414057 RGS18Q9NS28 235 aa18.86■□□□□ 0.61
SCAMP4-204ENST00000414057 FAM13BQ9NYF5 915 aa18.86■□□□□ 0.61
SCAMP4-204ENST00000414057 ST3GAL5Q9UNP4 418 aa18.86■□□□□ 0.61
SCAMP4-204ENST00000414057 SPTBN5Q9NRC6 3674 aaKnown RBP18.86■□□□□ 0.61
SCAMP4-204ENST00000414057 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.85■□□□□ 0.61
SCAMP4-204ENST00000414057 WNT7AO00755 349 aa18.85■□□□□ 0.61
SCAMP4-204ENST00000414057 CCNT1O60563 726 aaKnown RBP18.85■□□□□ 0.61
SCAMP4-204ENST00000414057 NR1I2O75469 434 aa18.85■□□□□ 0.61
SCAMP4-204ENST00000414057 VTNP04004 478 aa18.85■□□□□ 0.61
SCAMP4-204ENST00000414057 TBC1D8BQ0IIM8 1120 aa18.85■□□□□ 0.61
SCAMP4-204ENST00000414057 SNW1Q13573 536 aaKnown RBP18.85■□□□□ 0.61
SCAMP4-204ENST00000414057 TPRNQ4KMQ1 711 aa18.85■□□□□ 0.61
SCAMP4-204ENST00000414057 XKR3Q5GH77 459 aa18.85■□□□□ 0.61
SCAMP4-204ENST00000414057 SLC24A5Q71RS6 500 aa18.85■□□□□ 0.61
SCAMP4-204ENST00000414057 C4orf32Q8N8J7 132 aa18.85■□□□□ 0.61
SCAMP4-204ENST00000414057 P2RX5Q93086 422 aa18.85■□□□□ 0.61
SCAMP4-204ENST00000414057 OSMRQ99650 979 aa18.85■□□□□ 0.61
SCAMP4-204ENST00000414057 ADAM2Q99965 735 aa18.85■□□□□ 0.61
SCAMP4-204ENST00000414057 GOLPH3LQ9H4A5 285 aa18.85■□□□□ 0.61
SCAMP4-204ENST00000414057 CLSTN2Q9H4D0 955 aa18.85■□□□□ 0.61
SCAMP4-204ENST00000414057 CDHR5Q9HBB8 845 aa18.85■□□□□ 0.61
SCAMP4-204ENST00000414057 HPSEQ9Y251 543 aa18.85■□□□□ 0.61
SCAMP4-204ENST00000414057 ZNF862O60290 1169 aa18.84■□□□□ 0.61
SCAMP4-204ENST00000414057 NEMFO60524 1076 aa18.84■□□□□ 0.61
SCAMP4-204ENST00000414057 DKC1O60832 514 aaKnown RBP eCLIP18.84■□□□□ 0.61
SCAMP4-204ENST00000414057 GPR32O75388 356 aa18.84■□□□□ 0.61
SCAMP4-204ENST00000414057 LONP1P36776 959 aaKnown RBP18.84■□□□□ 0.61
SCAMP4-204ENST00000414057 CLCN3P51790 818 aa18.84■□□□□ 0.61
SCAMP4-204ENST00000414057 PUS10Q3MIT2 529 aaKnown RBP18.84■□□□□ 0.61
SCAMP4-204ENST00000414057 SHC4Q6S5L8 630 aa18.84■□□□□ 0.61
SCAMP4-204ENST00000414057 FMR1NBQ8N0W7 255 aaPredicted RBP18.84■□□□□ 0.61
SCAMP4-204ENST00000414057 TMEM40Q8WWA1 233 aa18.84■□□□□ 0.61
SCAMP4-204ENST00000414057 FAM20AQ96MK3 541 aa18.84■□□□□ 0.61
SCAMP4-204ENST00000414057 TIGD1Q96MW7 591 aa18.84■□□□□ 0.61
SCAMP4-204ENST00000414057 XIRP2A4UGR9 3374 aa18.84■□□□□ 0.61
SCAMP4-204ENST00000414057 A0A1B0GVL5 298 aa18.84■□□□□ 0.61
SCAMP4-204ENST00000414057 LINC00271P0C7V0 271 aa18.84■□□□□ 0.61
SCAMP4-204ENST00000414057 PFKFB1P16118 471 aa18.84■□□□□ 0.61
SCAMP4-204ENST00000414057 ZSCAN20P17040 1043 aaPredicted RBP18.84■□□□□ 0.61
SCAMP4-204ENST00000414057 NLRP11P59045 1033 aaKnown RBP18.84■□□□□ 0.61
SCAMP4-204ENST00000414057 ETNPPLQ8TBG4 499 aa18.84■□□□□ 0.61
SCAMP4-204ENST00000414057 PPP2R3CQ969Q6 453 aa18.84■□□□□ 0.61
SCAMP4-204ENST00000414057 PPP1R16BQ96T49 567 aa18.84■□□□□ 0.61
SCAMP4-204ENST00000414057 PYM1Q9BRP8 204 aaKnown RBP18.84■□□□□ 0.61
SCAMP4-204ENST00000414057 NIFKQ9BYG3 293 aaKnown RBP18.84■□□□□ 0.61
SCAMP4-204ENST00000414057 AAASQ9NRG9 546 aa18.84■□□□□ 0.61
SCAMP4-204ENST00000414057 SEPT9Q9UHD8 586 aaPredicted RBP18.84■□□□□ 0.61
SCAMP4-204ENST00000414057 TTC3P53804 2025 aa18.83■□□□□ 0.61
SCAMP4-204ENST00000414057 MARCH6O60337 910 aa18.83■□□□□ 0.6
SCAMP4-204ENST00000414057 OR52Z1P0C646 297 aa18.83■□□□□ 0.6
SCAMP4-204ENST00000414057 KCNA5P22460 613 aa18.83■□□□□ 0.6
SCAMP4-204ENST00000414057 EIF4BP23588 611 aaKnown RBP18.83■□□□□ 0.6
SCAMP4-204ENST00000414057 DNM2P50570 870 aa18.83■□□□□ 0.6
SCAMP4-204ENST00000414057 NDUFA8P51970 172 aa18.83■□□□□ 0.6
SCAMP4-204ENST00000414057 LEXMQ3ZCV2 418 aa18.83■□□□□ 0.6
SCAMP4-204ENST00000414057 TCEAL5Q5H9L2 206 aa18.83■□□□□ 0.6
SCAMP4-204ENST00000414057 B3GNT9Q6UX72 402 aa18.83■□□□□ 0.6
SCAMP4-204ENST00000414057 DTHD1Q6ZMT9 781 aa18.83■□□□□ 0.6
SCAMP4-204ENST00000414057 FAM228AQ86W67 206 aa18.83■□□□□ 0.6
SCAMP4-204ENST00000414057 LRRC71Q8N4P6 559 aa18.83■□□□□ 0.6
SCAMP4-204ENST00000414057 LINC01465Q8N7H1 131 aa18.83■□□□□ 0.6
SCAMP4-204ENST00000414057 GJA10Q969M2 543 aa18.83■□□□□ 0.6
SCAMP4-204ENST00000414057 PABPC5Q96DU9 382 aaKnown RBP18.83■□□□□ 0.6
SCAMP4-204ENST00000414057 SCLT1Q96NL6 688 aa18.83■□□□□ 0.6
SCAMP4-204ENST00000414057 CLIC6Q96NY7 704 aa18.83■□□□□ 0.6
SCAMP4-204ENST00000414057 JPH2Q9BR39 696 aaPredicted RBP18.83■□□□□ 0.6
SCAMP4-204ENST00000414057 TNMDQ9H2S6 317 aa18.83■□□□□ 0.6
SCAMP4-204ENST00000414057 ELAC1Q9H777 363 aaKnown RBP18.83■□□□□ 0.6
SCAMP4-204ENST00000414057 MRPL42Q9Y6G3 142 aaKnown RBP18.83■□□□□ 0.6
SCAMP4-204ENST00000414057 TBX3O15119 743 aa18.82■□□□□ 0.6
SCAMP4-204ENST00000414057 IBSPP21815 317 aaPredicted RBP18.82■□□□□ 0.6
SCAMP4-204ENST00000414057 SYKP43405 635 aa18.82■□□□□ 0.6
SCAMP4-204ENST00000414057 PSMC5P62195 406 aa18.82■□□□□ 0.6
SCAMP4-204ENST00000414057 UGCGQ16739 394 aa18.82■□□□□ 0.6
SCAMP4-204ENST00000414057 PAN2Q504Q3 1202 aaKnown RBP18.82■□□□□ 0.6
SCAMP4-204ENST00000414057 RBM43Q6ZSC3 357 aaKnown RBP18.82■□□□□ 0.6
SCAMP4-204ENST00000414057 ELOA2Q8IYF1 753 aaPredicted RBP18.82■□□□□ 0.6
SCAMP4-204ENST00000414057 AK8Q96MA6 479 aa18.82■□□□□ 0.6
SCAMP4-204ENST00000414057 CSRNP2Q9H175 543 aa18.82■□□□□ 0.6
SCAMP4-204ENST00000414057 ATP6V0A4Q9HBG4 840 aa18.82■□□□□ 0.6
SCAMP4-204ENST00000414057 TMEM161AQ9NX61 479 aa18.82■□□□□ 0.6
SCAMP4-204ENST00000414057 KCNH3Q9ULD8 1083 aa18.82■□□□□ 0.6
SCAMP4-204ENST00000414057 PLAGL2Q9UPG8 496 aa18.82■□□□□ 0.6
SCAMP4-204ENST00000414057 FAM50BQ9Y247 325 aa18.82■□□□□ 0.6
SCAMP4-204ENST00000414057 RALGAPA2Q2PPJ7 1873 aa18.82■□□□□ 0.6
SCAMP4-204ENST00000414057 VWA3AA6NCI4 1184 aa18.81■□□□□ 0.6
SCAMP4-204ENST00000414057 C9IYK1 514 aa18.81■□□□□ 0.6
SCAMP4-204ENST00000414057 GRM6O15303 877 aa18.81■□□□□ 0.6
SCAMP4-204ENST00000414057 HOXA2O43364 376 aa18.81■□□□□ 0.6
SCAMP4-204ENST00000414057 MGEA5O60502 916 aa18.81■□□□□ 0.6
SCAMP4-204ENST00000414057 ZNF202O95125 648 aa18.81■□□□□ 0.6
SCAMP4-204ENST00000414057 PPP2R5CQ13362 524 aa18.81■□□□□ 0.6
SCAMP4-204ENST00000414057 TARBP2Q15633 366 aaKnown RBP18.81■□□□□ 0.6
SCAMP4-204ENST00000414057 MTERF2Q49AM1 385 aa18.81■□□□□ 0.6
SCAMP4-204ENST00000414057 LRSAM1Q6UWE0 723 aa18.81■□□□□ 0.6
SCAMP4-204ENST00000414057 EXOC8Q8IYI6 725 aa18.81■□□□□ 0.6
SCAMP4-204ENST00000414057 CCDC34Q96HJ3 373 aa18.81■□□□□ 0.6
SCAMP4-204ENST00000414057 KCNMB3Q9NPA1 279 aa18.81■□□□□ 0.6
SCAMP4-204ENST00000414057 PCDHB12Q9Y5F1 795 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms