RNA–Protein interactions for RNA: ENST00000414040.6

TNFRSF25-206, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,198 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-206ENST00000414040 TBX10O75333 385 aa25.44■■□□□ 1.66
TNFRSF25-206ENST00000414040 BAG4O95429 457 aaKnown RBP25.44■■□□□ 1.66
TNFRSF25-206ENST00000414040 YWHABP31946 246 aaKnown RBP25.44■■□□□ 1.66
TNFRSF25-206ENST00000414040 PBX3P40426 434 aa25.44■■□□□ 1.66
TNFRSF25-206ENST00000414040 DNM2P50570 870 aa25.44■■□□□ 1.66
TNFRSF25-206ENST00000414040 CLUL1Q15846 466 aa25.44■■□□□ 1.66
TNFRSF25-206ENST00000414040 CTC1Q2NKJ3 1217 aa25.44■■□□□ 1.66
TNFRSF25-206ENST00000414040 NAALADL2Q58DX5 795 aa25.44■■□□□ 1.66
TNFRSF25-206ENST00000414040 ZNF598Q86UK7 904 aaKnown RBP25.44■■□□□ 1.66
TNFRSF25-206ENST00000414040 TMEM117Q9H0C3 514 aa25.44■■□□□ 1.66
TNFRSF25-206ENST00000414040 NEMFO60524 1076 aa25.43■■□□□ 1.66
TNFRSF25-206ENST00000414040 SLITRK3O94933 977 aa25.43■■□□□ 1.66
TNFRSF25-206ENST00000414040 ATP2B1P20020 1258 aa25.43■■□□□ 1.66
TNFRSF25-206ENST00000414040 POLGP54098 1239 aaPredicted RBP25.43■■□□□ 1.66
TNFRSF25-206ENST00000414040 ZNF410Q86VK4 478 aa25.43■■□□□ 1.66
TNFRSF25-206ENST00000414040 TPH2Q8IWU9 490 aa25.43■■□□□ 1.66
TNFRSF25-206ENST00000414040 EIF2AK1Q9BQI3 630 aaKnown RBP25.43■■□□□ 1.66
TNFRSF25-206ENST00000414040 TTC12Q9H892 705 aaPredicted RBP25.43■■□□□ 1.66
TNFRSF25-206ENST00000414040 IFT122Q9HBG6 1241 aa25.43■■□□□ 1.66
TNFRSF25-206ENST00000414040 C5orf42Q9H799 3197 aa25.42■■□□□ 1.66
TNFRSF25-206ENST00000414040 A0A087WWV3 80 aa25.42■■□□□ 1.66
TNFRSF25-206ENST00000414040 A0A0U1RQF3 1178 aa25.42■■□□□ 1.66
TNFRSF25-206ENST00000414040 GRXCR2A6NFK2 248 aa25.42■■□□□ 1.66
TNFRSF25-206ENST00000414040 FGF18O76093 207 aa25.42■■□□□ 1.66
TNFRSF25-206ENST00000414040 TXKP42681 527 aa25.42■■□□□ 1.66
TNFRSF25-206ENST00000414040 LONRF3Q496Y0 759 aa25.42■■□□□ 1.66
TNFRSF25-206ENST00000414040 XKR9Q5GH70 373 aa25.42■■□□□ 1.66
TNFRSF25-206ENST00000414040 HELQQ8TDG4 1101 aa25.42■■□□□ 1.66
TNFRSF25-206ENST00000414040 SLC7A3Q8WY07 619 aa25.42■■□□□ 1.66
TNFRSF25-206ENST00000414040 MTMR9Q96QG7 549 aa25.42■■□□□ 1.66
TNFRSF25-206ENST00000414040 MINDY3Q9H8M7 445 aa25.42■■□□□ 1.66
TNFRSF25-206ENST00000414040 RNF216Q9NWF9 866 aaPredicted RBP25.42■■□□□ 1.66
TNFRSF25-206ENST00000414040 PCDHA12Q9UN75 941 aa25.42■■□□□ 1.66
TNFRSF25-206ENST00000414040 PCDHB12Q9Y5F1 795 aa25.42■■□□□ 1.66
TNFRSF25-206ENST00000414040 COL4A3BPQ9Y5P4 624 aa25.42■■□□□ 1.66
TNFRSF25-206ENST00000414040 POTEMA6NI47 508 aa25.41■■□□□ 1.66
TNFRSF25-206ENST00000414040 MEIS3P2A8K0S8 358 aa25.41■■□□□ 1.66
TNFRSF25-206ENST00000414040 DKC1O60832 514 aaKnown RBP eCLIP25.41■■□□□ 1.66
TNFRSF25-206ENST00000414040 EMC2Q15006 297 aa25.41■■□□□ 1.66
TNFRSF25-206ENST00000414040 THNSL1Q8IYQ7 743 aa25.41■■□□□ 1.66
TNFRSF25-206ENST00000414040 PRPF31Q8WWY3 499 aaKnown RBP25.41■■□□□ 1.66
TNFRSF25-206ENST00000414040 LPPQ93052 612 aa25.41■■□□□ 1.66
TNFRSF25-206ENST00000414040 C8orf76Q96K31 380 aa25.41■■□□□ 1.66
TNFRSF25-206ENST00000414040 ZSWIM4Q9H7M6 989 aa25.41■■□□□ 1.66
TNFRSF25-206ENST00000414040 XPNPEP1Q9NQW7 623 aa25.41■■□□□ 1.66
TNFRSF25-206ENST00000414040 PIN4Q9Y237 131 aaKnown RBP25.41■■□□□ 1.66
TNFRSF25-206ENST00000414040 SFPQP23246 707 aaKnown RBP eCLIP25.4■■□□□ 1.66
TNFRSF25-206ENST00000414040 MCM7P33993 719 aa25.4■■□□□ 1.66
TNFRSF25-206ENST00000414040 RFC5P40937 340 aa25.4■■□□□ 1.66
TNFRSF25-206ENST00000414040 ERVFC1P60507 584 aa25.4■■□□□ 1.66
TNFRSF25-206ENST00000414040 RBM23Q86U06 439 aaKnown RBP25.4■■□□□ 1.66
TNFRSF25-206ENST00000414040 FAM178BQ8IXR5 827 aa25.4■■□□□ 1.66
TNFRSF25-206ENST00000414040 HSD17B14Q9BPX1 270 aa25.4■■□□□ 1.66
TNFRSF25-206ENST00000414040 JPH2Q9BR39 696 aaPredicted RBP25.4■■□□□ 1.66
TNFRSF25-206ENST00000414040 SRGAP2CP0DJJ0 459 aa25.39■■□□□ 1.66
TNFRSF25-206ENST00000414040 LAG3P18627 525 aa25.39■■□□□ 1.66
TNFRSF25-206ENST00000414040 PHKA2P46019 1235 aa25.39■■□□□ 1.66
TNFRSF25-206ENST00000414040 NRIP1P48552 1158 aa25.39■■□□□ 1.66
TNFRSF25-206ENST00000414040 RBM10P98175 930 aaKnown RBP25.39■■□□□ 1.66
TNFRSF25-206ENST00000414040 CDC42EP1Q00587 391 aa25.39■■□□□ 1.66
TNFRSF25-206ENST00000414040 LAMTOR4Q0VGL1 99 aa25.39■■□□□ 1.66
TNFRSF25-206ENST00000414040 TWF2Q6IBS0 349 aaKnown RBP25.39■■□□□ 1.66
TNFRSF25-206ENST00000414040 CATSPER4Q7RTX7 472 aa25.39■■□□□ 1.66
TNFRSF25-206ENST00000414040 ABI1Q8IZP0 508 aa25.39■■□□□ 1.66
TNFRSF25-206ENST00000414040 LRRC43Q8N309 656 aa25.39■■□□□ 1.66
TNFRSF25-206ENST00000414040 PSPC1Q8WXF1 523 aaKnown RBP25.39■■□□□ 1.66
TNFRSF25-206ENST00000414040 LLPHQ9BRT6 129 aaKnown RBP25.39■■□□□ 1.66
TNFRSF25-206ENST00000414040 EPHX3Q9H6B9 360 aa25.39■■□□□ 1.66
TNFRSF25-206ENST00000414040 AAASQ9NRG9 546 aa25.39■■□□□ 1.66
TNFRSF25-206ENST00000414040 DACT1Q9NYF0 836 aa25.39■■□□□ 1.66
TNFRSF25-206ENST00000414040 HOXA2O43364 376 aa25.38■■□□□ 1.65
TNFRSF25-206ENST00000414040 GLP2RO95838 553 aa25.38■■□□□ 1.65
TNFRSF25-206ENST00000414040 ADAM15Q13444 863 aa25.38■■□□□ 1.65
TNFRSF25-206ENST00000414040 KCNT2Q6UVM3 1135 aa25.38■■□□□ 1.65
TNFRSF25-206ENST00000414040 TLR9Q9NR96 1032 aa25.38■■□□□ 1.65
TNFRSF25-206ENST00000414040 CHST12Q9NRB3 414 aa25.38■■□□□ 1.65
TNFRSF25-206ENST00000414040 PER2O15055 1255 aa25.37■■□□□ 1.65
TNFRSF25-206ENST00000414040 RBM25P49756 843 aaKnown RBP25.37■■□□□ 1.65
TNFRSF25-206ENST00000414040 OTUD6AQ7L8S5 288 aa25.37■■□□□ 1.65
TNFRSF25-206ENST00000414040 FERMT3Q86UX7 667 aa25.37■■□□□ 1.65
TNFRSF25-206ENST00000414040 PIGOQ8TEQ8 1089 aa25.37■■□□□ 1.65
TNFRSF25-206ENST00000414040 ZSCAN31Q96LW9 406 aaPredicted RBP25.37■■□□□ 1.65
TNFRSF25-206ENST00000414040 MTRQ99707 1265 aa25.37■■□□□ 1.65
TNFRSF25-206ENST00000414040 AGPAT5Q9NUQ2 364 aa25.37■■□□□ 1.65
TNFRSF25-206ENST00000414040 FAM105AQ9NUU6 356 aa25.37■■□□□ 1.65
TNFRSF25-206ENST00000414040 PPME1Q9Y570 386 aa25.37■■□□□ 1.65
TNFRSF25-206ENST00000414040 LYPLA2O95372 231 aa25.36■■□□□ 1.65
TNFRSF25-206ENST00000414040 EOMESO95936 686 aa25.36■■□□□ 1.65
TNFRSF25-206ENST00000414040 UBE3AQ05086 875 aa25.36■■□□□ 1.65
TNFRSF25-206ENST00000414040 NBR1Q14596 966 aa25.36■■□□□ 1.65
TNFRSF25-206ENST00000414040 SAFBQ15424 915 aaKnown RBP eCLIP25.36■■□□□ 1.65
TNFRSF25-206ENST00000414040 ZNF174Q15697 407 aa25.36■■□□□ 1.65
TNFRSF25-206ENST00000414040 RNF149Q8NC42 400 aa25.36■■□□□ 1.65
TNFRSF25-206ENST00000414040 FBXO18Q8NFZ0 1043 aa25.36■■□□□ 1.65
TNFRSF25-206ENST00000414040 ZNF558Q96NG5 402 aa25.36■■□□□ 1.65
TNFRSF25-206ENST00000414040 TRAIPQ9BWF2 469 aa25.36■■□□□ 1.65
TNFRSF25-206ENST00000414040 INO80BQ9C086 356 aaPredicted RBP25.36■■□□□ 1.65
TNFRSF25-206ENST00000414040 CLEC1BQ9P126 229 aa25.36■■□□□ 1.65
TNFRSF25-206ENST00000414040 FSCN2O14926 492 aa25.35■■□□□ 1.65
TNFRSF25-206ENST00000414040 NCK2O43639 380 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms