RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 NSUN7Q8NE18 718 aaKnown RBP10.24□□□□□ -0.77
SNHG3-201ENST00000413987 CTCFLQ8NI51 663 aaPredicted RBP10.24□□□□□ -0.77
SNHG3-201ENST00000413987 CEP95Q96GE4 821 aa10.24□□□□□ -0.77
SNHG3-201ENST00000413987 WDR24Q96S15 920 aa10.24□□□□□ -0.77
SNHG3-201ENST00000413987 LZTS2Q9BRK4 669 aa10.24□□□□□ -0.77
SNHG3-201ENST00000413987 ATP6V0A4Q9HBG4 840 aa10.24□□□□□ -0.77
SNHG3-201ENST00000413987 KBTBD4Q9NVX7 518 aa10.24□□□□□ -0.77
SNHG3-201ENST00000413987 KCTD5Q9NXV2 234 aa10.24□□□□□ -0.77
SNHG3-201ENST00000413987 GIMAP2Q9UG22 337 aa10.24□□□□□ -0.77
SNHG3-201ENST00000413987 PFDN2Q9UHV9 154 aa10.24□□□□□ -0.77
SNHG3-201ENST00000413987 HERC5Q9UII4 1024 aaKnown RBP10.24□□□□□ -0.77
SNHG3-201ENST00000413987 ECM29Q5VYK3 1845 aa10.24□□□□□ -0.77
SNHG3-201ENST00000413987 CCDC196A0A1B0GTZ2 297 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 A0A1B0GVC2 190 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 A0A1B0GVL5 298 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 hCG_1642624A0A1W2PR95 340 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 FAM155AB1AL88 458 aaPredicted RBP10.23□□□□□ -0.77
SNHG3-201ENST00000413987 FZD9O00144 591 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 SH2B2O14492 632 aaPredicted RBP10.23□□□□□ -0.77
SNHG3-201ENST00000413987 IFIT3O14879 490 aaKnown RBP10.23□□□□□ -0.77
SNHG3-201ENST00000413987 PLCG2P16885 1265 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 FKBP1AP62942 108 aaKnown RBP10.23□□□□□ -0.77
SNHG3-201ENST00000413987 GRM3Q14832 879 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 STK38Q15208 465 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 TMEM67Q5HYA8 995 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 GPATCH4Q5T3I0 446 aaKnown RBP10.23□□□□□ -0.77
SNHG3-201ENST00000413987 FAAH2Q6GMR7 532 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 STRA8Q7Z7C7 330 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 MICU3Q86XE3 530 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 TMEM139Q8IV31 216 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 MICALL2Q8IY33 904 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 FAM186BQ8IYM0 893 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 IGDCC4Q8TDY8 1250 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 CCDC12Q8WUD4 166 aaPredicted RBP10.23□□□□□ -0.77
SNHG3-201ENST00000413987 DHX58Q96C10 678 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 VIPAS39Q9H9C1 493 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 LY9Q9HBG7 655 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 RNF181Q9P0P0 153 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 ADAMTS1Q9UHI8 967 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.23□□□□□ -0.77
SNHG3-201ENST00000413987 LTBP3Q9NS15 1303 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 FOCADQ5VW36 1801 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 PTPDC1A2A3K4 754 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 GOLGA8BA8MQT2 603 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 SKAP2O75563 359 aaPredicted RBP10.23□□□□□ -0.77
SNHG3-201ENST00000413987 ZNF202O95125 648 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 TNKSO95271 1327 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 BAG2O95816 211 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 ATP6V1E1P36543 226 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 TPD52P55327 224 aaPredicted RBP10.23□□□□□ -0.77
SNHG3-201ENST00000413987 CACNB2Q08289 660 aaPredicted RBP10.23□□□□□ -0.77
SNHG3-201ENST00000413987 DLGAP5Q15398 846 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 INF2Q27J81 1249 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.23□□□□□ -0.77
SNHG3-201ENST00000413987 CMTR1Q8N1G2 835 aaKnown RBP10.23□□□□□ -0.77
SNHG3-201ENST00000413987 LINC00301Q8NCQ3 95 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 CNNM3Q8NE01 707 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 CCT6BQ92526 530 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 TACO1Q9BSH4 297 aaKnown RBP10.23□□□□□ -0.77
SNHG3-201ENST00000413987 SLC13A1Q9BZW2 595 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 NUCKS1Q9H1E3 243 aaKnown RBP10.23□□□□□ -0.77
SNHG3-201ENST00000413987 MYOZ2Q9NPC6 264 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 RRN3Q9NYV6 651 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 CDC23Q9UJX2 597 aa10.23□□□□□ -0.77
SNHG3-201ENST00000413987 TTLL13PA6NNM8 815 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 UBE2Q2LH0YL09 131 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 WNT10BO00744 389 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 CD4P01730 458 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 PDIA3P30101 505 aaKnown RBP10.22□□□□□ -0.77
SNHG3-201ENST00000413987 EIF6P56537 245 aaKnown RBP10.22□□□□□ -0.77
SNHG3-201ENST00000413987 GPR162Q16538 588 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 SBK1Q52WX2 424 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 KIAA0319Q5VV43 1072 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 FASTKD5Q7L8L6 764 aaKnown RBP10.22□□□□□ -0.77
SNHG3-201ENST00000413987 COL26A1Q96A83 441 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 AGXT2Q9BYV1 514 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 TRIM8Q9BZR9 551 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 KRT23Q9C075 422 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 FTOQ9C0B1 505 aaKnown RBP eCLIP10.22□□□□□ -0.77
SNHG3-201ENST00000413987 DNAJC18Q9H819 358 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 ANKZF1Q9H8Y5 726 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 MKNK2Q9HBH9 465 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 DONSONQ9NYP3 566 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 C6orf203Q9P0P8 240 aaPredicted RBP10.22□□□□□ -0.77
SNHG3-201ENST00000413987 TUBE1Q9UJT0 475 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 ANGEL1Q9UNK9 670 aaKnown RBP10.22□□□□□ -0.77
SNHG3-201ENST00000413987 HPS5Q9UPZ3 1129 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 SBF1O95248 1867 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 SPTLC2O15270 562 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 RASA4O43374 803 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 DDNO94850 711 aaPredicted RBP10.22□□□□□ -0.77
SNHG3-201ENST00000413987 KRT10P13645 584 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 CMA1P23946 247 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 MCM3P25205 808 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 CDK8P49336 464 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 PAPOLAP51003 745 aaKnown RBP10.22□□□□□ -0.77
SNHG3-201ENST00000413987 MPP1Q00013 466 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 TFAP4Q01664 338 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 CASP8Q14790 479 aa10.22□□□□□ -0.77
SNHG3-201ENST00000413987 PPP2R5EQ16537 467 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms