RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 LIMCH1Q9UPQ0 1083 aa18.81■□□□□ 0.6
COL6A2-205ENST00000413758 SPTBN5Q9NRC6 3674 aaKnown RBP18.81■□□□□ 0.6
COL6A2-205ENST00000413758 FGF18O76093 207 aa18.8■□□□□ 0.6
COL6A2-205ENST00000413758 YWHABP31946 246 aaKnown RBP18.8■□□□□ 0.6
COL6A2-205ENST00000413758 NRIP1P48552 1158 aa18.8■□□□□ 0.6
COL6A2-205ENST00000413758 NDUFV1P49821 464 aa18.8■□□□□ 0.6
COL6A2-205ENST00000413758 CAMK1Q14012 370 aa18.8■□□□□ 0.6
COL6A2-205ENST00000413758 TWF2Q6IBS0 349 aaKnown RBP18.8■□□□□ 0.6
COL6A2-205ENST00000413758 ADGRD2Q7Z7M1 963 aa18.8■□□□□ 0.6
COL6A2-205ENST00000413758 LRRC43Q8N309 656 aa18.8■□□□□ 0.6
COL6A2-205ENST00000413758 ZNF579Q8NAF0 562 aaKnown RBP18.8■□□□□ 0.6
COL6A2-205ENST00000413758 TNFRSF25Q93038 417 aa18.8■□□□□ 0.6
COL6A2-205ENST00000413758 TMEM143Q96AN5 459 aa18.8■□□□□ 0.6
COL6A2-205ENST00000413758 CCDC43Q96MW1 224 aaKnown RBP18.8■□□□□ 0.6
COL6A2-205ENST00000413758 CASD1Q96PB1 797 aa18.8■□□□□ 0.6
COL6A2-205ENST00000413758 ZSWIM4Q9H7M6 989 aa18.8■□□□□ 0.6
COL6A2-205ENST00000413758 PCDHA12Q9UN75 941 aa18.8■□□□□ 0.6
COL6A2-205ENST00000413758 PIN4Q9Y237 131 aaKnown RBP18.8■□□□□ 0.6
COL6A2-205ENST00000413758 ATG2AQ2TAZ0 1938 aa18.8■□□□□ 0.6
COL6A2-205ENST00000413758 LINC01565O15544 149 aa18.79■□□□□ 0.6
COL6A2-205ENST00000413758 NEMFO60524 1076 aa18.79■□□□□ 0.6
COL6A2-205ENST00000413758 SRGAP2CP0DJJ0 459 aa18.79■□□□□ 0.6
COL6A2-205ENST00000413758 RFC5P40937 340 aa18.79■□□□□ 0.6
COL6A2-205ENST00000413758 TXKP42681 527 aa18.79■□□□□ 0.6
COL6A2-205ENST00000413758 UBE3AQ05086 875 aa18.79■□□□□ 0.6
COL6A2-205ENST00000413758 FAM178BQ8IXR5 827 aa18.79■□□□□ 0.6
COL6A2-205ENST00000413758 C4orf19Q8IY42 314 aa18.79■□□□□ 0.6
COL6A2-205ENST00000413758 GJD3Q8N144 294 aa18.79■□□□□ 0.6
COL6A2-205ENST00000413758 HELQQ8TDG4 1101 aa18.79■□□□□ 0.6
COL6A2-205ENST00000413758 ZNF558Q96NG5 402 aa18.79■□□□□ 0.6
COL6A2-205ENST00000413758 C1QTNF1Q9BXJ1 281 aa18.79■□□□□ 0.6
COL6A2-205ENST00000413758 CWH43Q9H720 699 aa18.79■□□□□ 0.6
COL6A2-205ENST00000413758 TLE6Q9H808 572 aa18.79■□□□□ 0.6
COL6A2-205ENST00000413758 TLR9Q9NR96 1032 aa18.79■□□□□ 0.6
COL6A2-205ENST00000413758 CHST12Q9NRB3 414 aa18.79■□□□□ 0.6
COL6A2-205ENST00000413758 WRAP73Q9P2S5 460 aaPredicted RBP18.79■□□□□ 0.6
COL6A2-205ENST00000413758 PUF60Q9UHX1 559 aaKnown RBP18.79■□□□□ 0.6
COL6A2-205ENST00000413758 PPME1Q9Y570 386 aa18.79■□□□□ 0.6
COL6A2-205ENST00000413758 PCDHGC5Q9Y5F6 944 aa18.79■□□□□ 0.6
COL6A2-205ENST00000413758 COL4A3BPQ9Y5P4 624 aa18.79■□□□□ 0.6
COL6A2-205ENST00000413758 A0A0U1RQF3 1178 aa18.78■□□□□ 0.6
COL6A2-205ENST00000413758 EOMESO95936 686 aa18.78■□□□□ 0.6
COL6A2-205ENST00000413758 LTBRP36941 435 aa18.78■□□□□ 0.6
COL6A2-205ENST00000413758 DLX2Q07687 328 aaPredicted RBP18.78■□□□□ 0.6
COL6A2-205ENST00000413758 COL19A1Q14993 1142 aa18.78■□□□□ 0.6
COL6A2-205ENST00000413758 LONRF3Q496Y0 759 aa18.78■□□□□ 0.6
COL6A2-205ENST00000413758 TCP11Q8WWU5 503 aa18.78■□□□□ 0.6
COL6A2-205ENST00000413758 PRPF31Q8WWY3 499 aaKnown RBP18.78■□□□□ 0.6
COL6A2-205ENST00000413758 PSPC1Q8WXF1 523 aaKnown RBP18.78■□□□□ 0.6
COL6A2-205ENST00000413758 EIF2AK1Q9BQI3 630 aaKnown RBP18.78■□□□□ 0.6
COL6A2-205ENST00000413758 TTC12Q9H892 705 aaPredicted RBP18.78■□□□□ 0.6
COL6A2-205ENST00000413758 RNF19AQ9NV58 838 aa18.78■□□□□ 0.6
COL6A2-205ENST00000413758 PLXNA4Q9HCM2 1894 aa18.77■□□□□ 0.6
COL6A2-205ENST00000413758 XIRP2A4UGR9 3374 aa18.77■□□□□ 0.6
COL6A2-205ENST00000413758 SKIP12755 728 aa18.77■□□□□ 0.6
COL6A2-205ENST00000413758 KRT17Q04695 432 aa18.77■□□□□ 0.6
COL6A2-205ENST00000413758 ADAM15Q13444 863 aa18.77■□□□□ 0.6
COL6A2-205ENST00000413758 GNL2Q13823 731 aaKnown RBP18.77■□□□□ 0.6
COL6A2-205ENST00000413758 EMC2Q15006 297 aa18.77■□□□□ 0.6
COL6A2-205ENST00000413758 CTC1Q2NKJ3 1217 aa18.77■□□□□ 0.6
COL6A2-205ENST00000413758 CLLU1OSQ5K130 101 aa18.77■□□□□ 0.6
COL6A2-205ENST00000413758 KCNT2Q6UVM3 1135 aa18.77■□□□□ 0.6
COL6A2-205ENST00000413758 LRRC55Q6ZSA7 311 aa18.77■□□□□ 0.6
COL6A2-205ENST00000413758 C8orf76Q96K31 380 aa18.77■□□□□ 0.6
COL6A2-205ENST00000413758 EPHX3Q9H6B9 360 aa18.77■□□□□ 0.6
COL6A2-205ENST00000413758 DHX33Q9H6R0 707 aaKnown RBP18.77■□□□□ 0.6
COL6A2-205ENST00000413758 CD320Q9NPF0 282 aa18.77■□□□□ 0.6
COL6A2-205ENST00000413758 ENTPD7Q9NQZ7 604 aa18.77■□□□□ 0.6
COL6A2-205ENST00000413758 CD207Q9UJ71 328 aa18.77■□□□□ 0.6
COL6A2-205ENST00000413758 NCOR1O75376 2440 aa18.76■□□□□ 0.59
COL6A2-205ENST00000413758 PER2O15055 1255 aa18.76■□□□□ 0.59
COL6A2-205ENST00000413758 ZBTB39O15060 712 aa18.76■□□□□ 0.59
COL6A2-205ENST00000413758 TBX10O75333 385 aa18.76■□□□□ 0.59
COL6A2-205ENST00000413758 MCM7P33993 719 aa18.76■□□□□ 0.59
COL6A2-205ENST00000413758 PPM1AP35813 382 aa18.76■□□□□ 0.59
COL6A2-205ENST00000413758 PBX3P40426 434 aa18.76■□□□□ 0.59
COL6A2-205ENST00000413758 PHKA2P46019 1235 aa18.76■□□□□ 0.59
COL6A2-205ENST00000413758 SPIRE1Q08AE8 756 aa18.76■□□□□ 0.59
COL6A2-205ENST00000413758 LAMTOR4Q0VGL1 99 aa18.76■□□□□ 0.59
COL6A2-205ENST00000413758 ST3GAL1Q11201 340 aa18.76■□□□□ 0.59
COL6A2-205ENST00000413758 PLPP4Q5VZY2 271 aa18.76■□□□□ 0.59
COL6A2-205ENST00000413758 EFHBQ8N7U6 833 aa18.76■□□□□ 0.59
COL6A2-205ENST00000413758 FAM184AQ8NB25 1140 aa18.76■□□□□ 0.59
COL6A2-205ENST00000413758 MRPS27Q92552 414 aaKnown RBP18.76■□□□□ 0.59
COL6A2-205ENST00000413758 LPPQ93052 612 aa18.76■□□□□ 0.59
COL6A2-205ENST00000413758 ZSCAN31Q96LW9 406 aaPredicted RBP18.76■□□□□ 0.59
COL6A2-205ENST00000413758 MTRQ99707 1265 aa18.76■□□□□ 0.59
COL6A2-205ENST00000413758 MRPL9Q9BYD2 267 aaKnown RBP18.76■□□□□ 0.59
COL6A2-205ENST00000413758 SPG21Q9NZD8 308 aa18.76■□□□□ 0.59
COL6A2-205ENST00000413758 INPP5FQ9Y2H2 1132 aa18.76■□□□□ 0.59
COL6A2-205ENST00000413758 GAS2O43903 313 aaKnown RBP18.75■□□□□ 0.59
COL6A2-205ENST00000413758 SLITRK3O94933 977 aa18.75■□□□□ 0.59
COL6A2-205ENST00000413758 COL9A1P20849 921 aa18.75■□□□□ 0.59
COL6A2-205ENST00000413758 CA8P35219 290 aa18.75■□□□□ 0.59
COL6A2-205ENST00000413758 RAB27AP51159 221 aa18.75■□□□□ 0.59
COL6A2-205ENST00000413758 ERVFC1P60507 584 aa18.75■□□□□ 0.59
COL6A2-205ENST00000413758 PDE12Q6L8Q7 609 aaKnown RBP18.75■□□□□ 0.59
COL6A2-205ENST00000413758 SRGAP1Q7Z6B7 1085 aa18.75■□□□□ 0.59
COL6A2-205ENST00000413758 ZNF598Q86UK7 904 aaKnown RBP18.75■□□□□ 0.59
COL6A2-205ENST00000413758 LLPHQ9BRT6 129 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms