RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 ACVR2BQ13705 512 aa9.24□□□□□ -0.93
SYNE1-211ENST00000413186 GPR142Q7Z601 462 aa9.24□□□□□ -0.93
SYNE1-211ENST00000413186 LRRC8AQ8IWT6 810 aa9.24□□□□□ -0.93
SYNE1-211ENST00000413186 TEPSINQ96N21 525 aa9.24□□□□□ -0.93
SYNE1-211ENST00000413186 SAMSN1Q9NSI8 373 aaKnown RBP9.24□□□□□ -0.93
SYNE1-211ENST00000413186 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.24□□□□□ -0.93
SYNE1-211ENST00000413186 IGSF9BQ9UPX0 1349 aa9.24□□□□□ -0.93
SYNE1-211ENST00000413186 FKTNO75072 461 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 ACTN2P35609 894 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 PDE6CP51160 858 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 SHROOM1Q2M3G4 852 aaPredicted RBP9.23□□□□□ -0.93
SYNE1-211ENST00000413186 SESTD1Q86VW0 696 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 KRT222Q8N1A0 295 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 ENGASEQ8NFI3 743 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 APBA2Q99767 749 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 CPSF2Q9P2I0 782 aaKnown RBP9.23□□□□□ -0.93
SYNE1-211ENST00000413186 DBR1Q9UK59 544 aaKnown RBP9.23□□□□□ -0.93
SYNE1-211ENST00000413186 GUCA1BQ9UMX6 200 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 UBIAD1Q9Y5Z9 338 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 FAM86B1E9PN63 330 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 FAM86B2P0C5J1 330 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 POLR2BP30876 1174 aaKnown RBP9.23□□□□□ -0.93
SYNE1-211ENST00000413186 GRB10Q13322 594 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 MICALCLQ6ZW33 695 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 HPSEQ9Y251 543 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 CCDC88AQ3V6T2 1871 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 MYH2Q9UKX2 1941 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 SARNPP82979 210 aaKnown RBP9.23□□□□□ -0.93
SYNE1-211ENST00000413186 SLMAPQ14BN4 828 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 EDRF1Q3B7T1 1238 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 PLA2G4FQ68DD2 849 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 SYT10Q6XYQ8 523 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 ABRAQ8N0Z2 381 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 LRRC43Q8N309 656 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 TMEM143Q96AN5 459 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 ZNF831Q5JPB2 1677 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 C17orf102A2RUQ5 167 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 MED24O75448 989 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 MAP2K1Q02750 393 aaPredicted RBP9.23□□□□□ -0.93
SYNE1-211ENST00000413186 FSTL1Q12841 308 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 DBN1Q16643 649 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 RINT1Q6NUQ1 792 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 EFCAB12Q6NXP0 572 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 OTOP1Q7RTM1 612 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 MSL3Q8N5Y2 521 aaKnown RBP9.23□□□□□ -0.93
SYNE1-211ENST00000413186 ATP8B4Q8TF62 1192 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 AFG1LQ8WV93 481 aa9.23□□□□□ -0.93
SYNE1-211ENST00000413186 AGO2Q9UKV8 859 aaKnown RBP9.23□□□□□ -0.93
SYNE1-211ENST00000413186 SNED1Q8TER0 1413 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 PHF20L1A8MW92 1017 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 NPEPPSP55786 919 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 OSTNP61366 133 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 ADSSL1Q8N142 457 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 GPD1LQ8N335 351 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 TTC39CQ8N584 583 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 BEST2Q8NFU1 509 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 ZBED3Q96IU2 234 aaPredicted RBP9.22□□□□□ -0.93
SYNE1-211ENST00000413186 HMX1Q9NP08 348 aaPredicted RBP9.22□□□□□ -0.93
SYNE1-211ENST00000413186 ZCCHC17Q9NP64 241 aaKnown RBP9.22□□□□□ -0.93
SYNE1-211ENST00000413186 GCNT4Q9P109 453 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 NFASCO94856 1347 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 GOLGA8IPA6NC78 632 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 GOLGA8JA6NMD2 632 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 H3BRB1 525 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 ATP2A1O14983 1001 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 FOXN1O15353 648 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 NMT1P30419 496 aaKnown RBP9.22□□□□□ -0.93
SYNE1-211ENST00000413186 GRIN1Q05586 938 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 KRT31Q15323 416 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 EARS2Q5JPH6 523 aaKnown RBP9.22□□□□□ -0.93
SYNE1-211ENST00000413186 RPGRIP1Q96KN7 1286 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 MTIF3Q9H2K0 278 aaKnown RBP9.22□□□□□ -0.93
SYNE1-211ENST00000413186 TUT1Q9H6E5 874 aaKnown RBP9.22□□□□□ -0.93
SYNE1-211ENST00000413186 KBTBD4Q9NVX7 518 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 TRIM17Q9Y577 477 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 BRWD3Q6RI45 1802 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 DCUN1D2Q6PH85 259 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 FRMD5Q7Z6J6 570 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 SNX25Q9H3E2 840 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 LZTFL1Q9NQ48 299 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 TACC3Q9Y6A5 838 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 SLC16A3O15427 465 aaKnown RBP9.22□□□□□ -0.93
SYNE1-211ENST00000413186 TAL1P17542 331 aaPredicted RBP9.22□□□□□ -0.93
SYNE1-211ENST00000413186 URGCPQ8TCY9 931 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 FAM213AQ9BRX8 229 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 MTG1Q9BT17 334 aaPredicted RBP9.22□□□□□ -0.93
SYNE1-211ENST00000413186 KCNMB3Q9NPA1 279 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 CTTNBP2NLQ9P2B4 639 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 TSKSQ9UJT2 592 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 MORC2Q9Y6X9 1032 aaPredicted RBP9.22□□□□□ -0.93
SYNE1-211ENST00000413186 LY75O60449 1722 aa9.22□□□□□ -0.93
SYNE1-211ENST00000413186 COBLO75128 1261 aa9.21□□□□□ -0.93
SYNE1-211ENST00000413186 FAM193AP78312 1265 aa9.21□□□□□ -0.93
SYNE1-211ENST00000413186 ZBED6P86452 979 aa9.21□□□□□ -0.93
SYNE1-211ENST00000413186 ZNF667Q5HYK9 610 aa9.21□□□□□ -0.93
SYNE1-211ENST00000413186 CYP2W1Q8TAV3 490 aa9.21□□□□□ -0.93
SYNE1-211ENST00000413186 JAKMIP2Q96AA8 810 aa9.21□□□□□ -0.93
SYNE1-211ENST00000413186 MTMR8Q96EF0 704 aa9.21□□□□□ -0.93
SYNE1-211ENST00000413186 MTMR9Q96QG7 549 aa9.21□□□□□ -0.93
SYNE1-211ENST00000413186 NAPGQ99747 312 aaPredicted RBP9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms