RNA–Protein interactions for RNA: ENST00000413184.6

CPSF7-203, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-203ENST00000413184 AKAP3O75969 853 aa8.37□□□□□ -1.07
CPSF7-203ENST00000413184 SMIM10L2AP0DMW4 78 aa8.37□□□□□ -1.07
CPSF7-203ENST00000413184 SMIM10L2BP0DMW5 78 aa8.37□□□□□ -1.07
CPSF7-203ENST00000413184 BMP3P12645 472 aa8.37□□□□□ -1.07
CPSF7-203ENST00000413184 KLRC2P26717 231 aa8.37□□□□□ -1.07
CPSF7-203ENST00000413184 HOXA6P31267 233 aa8.37□□□□□ -1.07
CPSF7-203ENST00000413184 HOXC13P31276 330 aa8.37□□□□□ -1.07
CPSF7-203ENST00000413184 PXNP49023 591 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-203ENST00000413184 BAATQ14032 418 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-203ENST00000413184 BECN1Q14457 450 aa8.37□□□□□ -1.07
CPSF7-203ENST00000413184 TRIP6Q15654 476 aaKnown RBP8.37□□□□□ -1.07
CPSF7-203ENST00000413184 FBXO47Q5MNV8 452 aa8.37□□□□□ -1.07
CPSF7-203ENST00000413184 CCDC62Q6P9F0 684 aa8.37□□□□□ -1.07
CPSF7-203ENST00000413184 ZC3H18Q86VM9 953 aaKnown RBP8.37□□□□□ -1.07
CPSF7-203ENST00000413184 VPS52Q8N1B4 723 aa8.37□□□□□ -1.07
CPSF7-203ENST00000413184 MIGA1Q8NAN2 632 aa8.37□□□□□ -1.07
CPSF7-203ENST00000413184 FAM3CQ92520 227 aa8.37□□□□□ -1.07
CPSF7-203ENST00000413184 XAGE2Q96GT9 111 aa8.37□□□□□ -1.07
CPSF7-203ENST00000413184 KXD1Q9BQD3 176 aa8.37□□□□□ -1.07
CPSF7-203ENST00000413184 DUSP15Q9H1R2 295 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-203ENST00000413184 RNPEPQ9H4A4 650 aa8.37□□□□□ -1.07
CPSF7-203ENST00000413184 SWAP70Q9UH65 585 aa8.37□□□□□ -1.07
CPSF7-203ENST00000413184 SEPT9Q9UHD8 586 aaPredicted RBP8.37□□□□□ -1.07
CPSF7-203ENST00000413184 PCDHB9Q9Y5E1 797 aa8.37□□□□□ -1.07
CPSF7-203ENST00000413184 OTOGQ6ZRI0 2925 aa8.37□□□□□ -1.07
CPSF7-203ENST00000413184 PTPDC1A2A3K4 754 aa8.36□□□□□ -1.07
CPSF7-203ENST00000413184 SMARCA5O60264 1052 aaPredicted RBP8.36□□□□□ -1.07
CPSF7-203ENST00000413184 ZMYND10O75800 440 aa8.36□□□□□ -1.07
CPSF7-203ENST00000413184 NDUFB10O96000 172 aa8.36□□□□□ -1.07
CPSF7-203ENST00000413184 FDX1P10109 184 aa8.36□□□□□ -1.07
CPSF7-203ENST00000413184 GNAT1P11488 350 aa8.36□□□□□ -1.07
CPSF7-203ENST00000413184 GSPT1P15170 499 aaKnown RBP8.36□□□□□ -1.07
CPSF7-203ENST00000413184 GRNP28799 593 aaKnown RBP8.36□□□□□ -1.07
CPSF7-203ENST00000413184 SARSP49591 514 aaKnown RBP8.36□□□□□ -1.07
CPSF7-203ENST00000413184 CLCN4P51793 760 aa8.36□□□□□ -1.07
CPSF7-203ENST00000413184 KLRC3Q07444 240 aa8.36□□□□□ -1.07
CPSF7-203ENST00000413184 NFATC3Q12968 1075 aa8.36□□□□□ -1.07
CPSF7-203ENST00000413184 TTC22Q5TAA0 569 aa8.36□□□□□ -1.07
CPSF7-203ENST00000413184 SEPT14Q6ZU15 432 aa8.36□□□□□ -1.07
CPSF7-203ENST00000413184 PPTC7Q8NI37 304 aa8.36□□□□□ -1.07
CPSF7-203ENST00000413184 OTUD7AQ8TE49 926 aaPredicted RBP8.36□□□□□ -1.07
CPSF7-203ENST00000413184 ZBP1Q9H171 429 aa8.36□□□□□ -1.07
CPSF7-203ENST00000413184 CDHR5Q9HBB8 845 aa8.36□□□□□ -1.07
CPSF7-203ENST00000413184 POLMQ9NP87 494 aaPredicted RBP8.36□□□□□ -1.07
CPSF7-203ENST00000413184 MAN1C1Q9NR34 630 aa8.36□□□□□ -1.07
CPSF7-203ENST00000413184 PLEKHB1Q9UF11 243 aaPredicted RBP8.36□□□□□ -1.07
CPSF7-203ENST00000413184 ISY1Q9ULR0 285 aaKnown RBP8.36□□□□□ -1.07
CPSF7-203ENST00000413184 APOBEC2Q9Y235 224 aaKnown RBP8.36□□□□□ -1.07
CPSF7-203ENST00000413184 IRAK3Q9Y616 596 aa8.36□□□□□ -1.07
CPSF7-203ENST00000413184 MTORP42345 2549 aa8.36□□□□□ -1.07
CPSF7-203ENST00000413184 NID2Q14112 1375 aa8.35□□□□□ -1.07
CPSF7-203ENST00000413184 HMMRO75330 724 aa8.35□□□□□ -1.07
CPSF7-203ENST00000413184 GNAI2P04899 355 aa8.35□□□□□ -1.07
CPSF7-203ENST00000413184 CHRNB1P11230 501 aa8.35□□□□□ -1.07
CPSF7-203ENST00000413184 HOXC8P31273 242 aa8.35□□□□□ -1.07
CPSF7-203ENST00000413184 RFX5P48382 616 aaPredicted RBP8.35□□□□□ -1.07
CPSF7-203ENST00000413184 SEMA3FQ13275 785 aa8.35□□□□□ -1.07
CPSF7-203ENST00000413184 GORABQ5T7V8 394 aa8.35□□□□□ -1.07
CPSF7-203ENST00000413184 ELMSAN1Q6PJG2 1045 aa8.35□□□□□ -1.07
CPSF7-203ENST00000413184 TOGARAM2Q6ZUX3 1019 aa8.35□□□□□ -1.07
CPSF7-203ENST00000413184 TMPRSS7Q7RTY8 843 aa8.35□□□□□ -1.07
CPSF7-203ENST00000413184 MARCH9Q86YJ5 346 aa8.35□□□□□ -1.07
CPSF7-203ENST00000413184 CERS3Q8IU89 383 aa8.35□□□□□ -1.07
CPSF7-203ENST00000413184 PDCD7Q8N8D1 485 aaKnown RBP8.35□□□□□ -1.07
CPSF7-203ENST00000413184 BAP1Q92560 729 aa8.35□□□□□ -1.07
CPSF7-203ENST00000413184 TMEM169Q96HH4 297 aa8.35□□□□□ -1.07
CPSF7-203ENST00000413184 CCDC17Q96LX7 622 aa8.35□□□□□ -1.07
CPSF7-203ENST00000413184 RHOBTB2Q9BYZ6 727 aa8.35□□□□□ -1.07
CPSF7-203ENST00000413184 SRCIN1Q9C0H9 1055 aa8.35□□□□□ -1.07
CPSF7-203ENST00000413184 AGO3Q9H9G7 860 aaKnown RBP8.35□□□□□ -1.07
CPSF7-203ENST00000413184 C2orf42Q9NWW7 574 aa8.35□□□□□ -1.07
CPSF7-203ENST00000413184 MCM9Q9NXL9 1143 aa8.35□□□□□ -1.07
CPSF7-203ENST00000413184 SVILO95425 2214 aa8.34□□□□□ -1.07
CPSF7-203ENST00000413184 EML5Q05BV3 1969 aa8.34□□□□□ -1.07
CPSF7-203ENST00000413184 B4DLN1 442 aa8.34□□□□□ -1.07
CPSF7-203ENST00000413184 CDC45O75419 566 aa8.34□□□□□ -1.07
CPSF7-203ENST00000413184 CIAO1O76071 339 aa8.34□□□□□ -1.07
CPSF7-203ENST00000413184 C8AP07357 584 aa8.34□□□□□ -1.07
CPSF7-203ENST00000413184 GNAI3P08754 354 aa8.34□□□□□ -1.07
CPSF7-203ENST00000413184 MYBP10242 640 aa8.34□□□□□ -1.07
CPSF7-203ENST00000413184 CTSAP10619 480 aa8.34□□□□□ -1.07
CPSF7-203ENST00000413184 CYP7A1P22680 504 aa8.34□□□□□ -1.07
CPSF7-203ENST00000413184 CALML3P27482 149 aa8.34□□□□□ -1.07
CPSF7-203ENST00000413184 MRPL12P52815 198 aaKnown RBP8.34□□□□□ -1.07
CPSF7-203ENST00000413184 MGAT3Q09327 533 aa8.34□□□□□ -1.07
CPSF7-203ENST00000413184 PTGDRQ13258 359 aa8.34□□□□□ -1.07
CPSF7-203ENST00000413184 LAMC2Q13753 1193 aa8.34□□□□□ -1.07
CPSF7-203ENST00000413184 LRRC32Q14392 662 aa8.34□□□□□ -1.07
CPSF7-203ENST00000413184 NFKBIBQ15653 356 aa8.34□□□□□ -1.07
CPSF7-203ENST00000413184 PKDCCQ504Y2 493 aa8.34□□□□□ -1.07
CPSF7-203ENST00000413184 PDXDC1Q6P996 788 aa8.34□□□□□ -1.07
CPSF7-203ENST00000413184 RSPH3Q86UC2 560 aa8.34□□□□□ -1.07
CPSF7-203ENST00000413184 SRRM1Q8IYB3 904 aaKnown RBP8.34□□□□□ -1.07
CPSF7-203ENST00000413184 SLC39A11Q8N1S5 342 aa8.34□□□□□ -1.07
CPSF7-203ENST00000413184 DYNLL2Q96FJ2 89 aa8.34□□□□□ -1.07
CPSF7-203ENST00000413184 NUSAP1Q9BXS6 441 aaKnown RBP8.34□□□□□ -1.07
CPSF7-203ENST00000413184 EMILIN2Q9BXX0 1053 aa8.34□□□□□ -1.07
CPSF7-203ENST00000413184 MKNK2Q9HBH9 465 aa8.34□□□□□ -1.07
CPSF7-203ENST00000413184 SETD4Q9NVD3 440 aa8.34□□□□□ -1.07
CPSF7-203ENST00000413184 CCDC163A0A0D9SF12 145 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms