RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 TBX3O15119 743 aa12.97□□□□□ -0.33
LINC00963-201ENST00000412141 DKC1O60832 514 aaKnown RBP eCLIP12.97□□□□□ -0.33
LINC00963-201ENST00000412141 FGF18O76093 207 aa12.97□□□□□ -0.33
LINC00963-201ENST00000412141 SSTR3P32745 418 aaPredicted RBP12.97□□□□□ -0.33
LINC00963-201ENST00000412141 SPIRE1Q08AE8 756 aa12.97□□□□□ -0.33
LINC00963-201ENST00000412141 SAFBQ15424 915 aaKnown RBP eCLIP12.97□□□□□ -0.33
LINC00963-201ENST00000412141 C8orf34Q49A92 452 aa12.97□□□□□ -0.33
LINC00963-201ENST00000412141 TWF2Q6IBS0 349 aaKnown RBP12.97□□□□□ -0.33
LINC00963-201ENST00000412141 LRRC55Q6ZSA7 311 aa12.97□□□□□ -0.33
LINC00963-201ENST00000412141 ADGRD2Q7Z7M1 963 aa12.97□□□□□ -0.33
LINC00963-201ENST00000412141 COLGALT1Q8NBJ5 622 aa12.97□□□□□ -0.33
LINC00963-201ENST00000412141 LPPQ93052 612 aa12.97□□□□□ -0.33
LINC00963-201ENST00000412141 P2RX5Q93086 422 aa12.97□□□□□ -0.33
LINC00963-201ENST00000412141 CASD1Q96PB1 797 aa12.97□□□□□ -0.33
LINC00963-201ENST00000412141 EIF2AK1Q9BQI3 630 aaKnown RBP12.97□□□□□ -0.33
LINC00963-201ENST00000412141 JPH2Q9BR39 696 aaPredicted RBP12.97□□□□□ -0.33
LINC00963-201ENST00000412141 TMEM117Q9H0C3 514 aa12.97□□□□□ -0.33
LINC00963-201ENST00000412141 ZSWIM4Q9H7M6 989 aa12.97□□□□□ -0.33
LINC00963-201ENST00000412141 TTC12Q9H892 705 aaPredicted RBP12.97□□□□□ -0.33
LINC00963-201ENST00000412141 CD320Q9NPF0 282 aa12.97□□□□□ -0.33
LINC00963-201ENST00000412141 RNF19AQ9NV58 838 aa12.97□□□□□ -0.33
LINC00963-201ENST00000412141 COL4A3BPQ9Y5P4 624 aa12.97□□□□□ -0.33
LINC00963-201ENST00000412141 RALGAPA2Q2PPJ7 1873 aa12.96□□□□□ -0.33
LINC00963-201ENST00000412141 PER2O15055 1255 aa12.96□□□□□ -0.33
LINC00963-201ENST00000412141 NEMFO60524 1076 aa12.96□□□□□ -0.33
LINC00963-201ENST00000412141 SLITRK3O94933 977 aa12.96□□□□□ -0.33
LINC00963-201ENST00000412141 SFPQP23246 707 aaKnown RBP eCLIP12.96□□□□□ -0.33
LINC00963-201ENST00000412141 LTBRP36941 435 aa12.96□□□□□ -0.33
LINC00963-201ENST00000412141 NRIP1P48552 1158 aa12.96□□□□□ -0.33
LINC00963-201ENST00000412141 ERVFC1P60507 584 aa12.96□□□□□ -0.33
LINC00963-201ENST00000412141 CDC42EP1Q00587 391 aa12.96□□□□□ -0.33
LINC00963-201ENST00000412141 GNL2Q13823 731 aaKnown RBP12.96□□□□□ -0.33
LINC00963-201ENST00000412141 ZNF174Q15697 407 aa12.96□□□□□ -0.33
LINC00963-201ENST00000412141 CLLU1OSQ5K130 101 aa12.96□□□□□ -0.33
LINC00963-201ENST00000412141 OTUD6AQ7L8S5 288 aa12.96□□□□□ -0.33
LINC00963-201ENST00000412141 ZNF710Q8N1W2 664 aa12.96□□□□□ -0.33
LINC00963-201ENST00000412141 NEK9Q8TD19 979 aa12.96□□□□□ -0.33
LINC00963-201ENST00000412141 PIGOQ8TEQ8 1089 aa12.96□□□□□ -0.33
LINC00963-201ENST00000412141 KHSRPQ92945 711 aaKnown RBP eCLIP12.96□□□□□ -0.33
LINC00963-201ENST00000412141 KIF2CQ99661 725 aa12.96□□□□□ -0.33
LINC00963-201ENST00000412141 TMEM60Q9H2L4 133 aa12.96□□□□□ -0.33
LINC00963-201ENST00000412141 CWH43Q9H720 699 aa12.96□□□□□ -0.33
LINC00963-201ENST00000412141 ELAC1Q9H777 363 aaKnown RBP12.96□□□□□ -0.33
LINC00963-201ENST00000412141 INPP5FQ9Y2H2 1132 aa12.96□□□□□ -0.33
LINC00963-201ENST00000412141 A0A0U1RQF3 1178 aa12.95□□□□□ -0.34
LINC00963-201ENST00000412141 GRXCR2A6NFK2 248 aa12.95□□□□□ -0.34
LINC00963-201ENST00000412141 POTEMA6NI47 508 aa12.95□□□□□ -0.34
LINC00963-201ENST00000412141 NT5C1B-RDH14C9J2C7 533 aa12.95□□□□□ -0.34
LINC00963-201ENST00000412141 HOXA2O43364 376 aa12.95□□□□□ -0.34
LINC00963-201ENST00000412141 CA8P35219 290 aa12.95□□□□□ -0.34
LINC00963-201ENST00000412141 RFC5P40937 340 aa12.95□□□□□ -0.34
LINC00963-201ENST00000412141 NDUFV1P49821 464 aa12.95□□□□□ -0.34
LINC00963-201ENST00000412141 LAMTOR4Q0VGL1 99 aa12.95□□□□□ -0.34
LINC00963-201ENST00000412141 EMC2Q15006 297 aa12.95□□□□□ -0.34
LINC00963-201ENST00000412141 NAALADL2Q58DX5 795 aa12.95□□□□□ -0.34
LINC00963-201ENST00000412141 PLPP4Q5VZY2 271 aa12.95□□□□□ -0.34
LINC00963-201ENST00000412141 KCNT2Q6UVM3 1135 aa12.95□□□□□ -0.34
LINC00963-201ENST00000412141 ZNF410Q86VK4 478 aa12.95□□□□□ -0.34
LINC00963-201ENST00000412141 FAM178BQ8IXR5 827 aa12.95□□□□□ -0.34
LINC00963-201ENST00000412141 C4orf19Q8IY42 314 aa12.95□□□□□ -0.34
LINC00963-201ENST00000412141 FAM184AQ8NB25 1140 aa12.95□□□□□ -0.34
LINC00963-201ENST00000412141 PSPC1Q8WXF1 523 aaKnown RBP12.95□□□□□ -0.34
LINC00963-201ENST00000412141 PPP2R3CQ969Q6 453 aa12.95□□□□□ -0.34
LINC00963-201ENST00000412141 CCDC43Q96MW1 224 aaKnown RBP12.95□□□□□ -0.34
LINC00963-201ENST00000412141 INO80BQ9C086 356 aaPredicted RBP12.95□□□□□ -0.34
LINC00963-201ENST00000412141 EPHX3Q9H6B9 360 aa12.95□□□□□ -0.34
LINC00963-201ENST00000412141 DHX33Q9H6R0 707 aaKnown RBP12.95□□□□□ -0.34
LINC00963-201ENST00000412141 TLE6Q9H808 572 aa12.95□□□□□ -0.34
LINC00963-201ENST00000412141 MINDY3Q9H8M7 445 aa12.95□□□□□ -0.34
LINC00963-201ENST00000412141 DACT1Q9NYF0 836 aa12.95□□□□□ -0.34
LINC00963-201ENST00000412141 MEIS3P2A8K0S8 358 aa12.94□□□□□ -0.34
LINC00963-201ENST00000412141 NCK2O43639 380 aa12.94□□□□□ -0.34
LINC00963-201ENST00000412141 TBX10O75333 385 aa12.94□□□□□ -0.34
LINC00963-201ENST00000412141 ATF7P17544 494 aaPredicted RBP12.94□□□□□ -0.34
LINC00963-201ENST00000412141 LAG3P18627 525 aa12.94□□□□□ -0.34
LINC00963-201ENST00000412141 PHKA2P46019 1235 aa12.94□□□□□ -0.34
LINC00963-201ENST00000412141 RBM10P98175 930 aaKnown RBP12.94□□□□□ -0.34
LINC00963-201ENST00000412141 ADAM15Q13444 863 aa12.94□□□□□ -0.34
LINC00963-201ENST00000412141 NBR1Q14596 966 aa12.94□□□□□ -0.34
LINC00963-201ENST00000412141 MAEAQ7L5Y9 396 aa12.94□□□□□ -0.34
LINC00963-201ENST00000412141 GJD3Q8N144 294 aa12.94□□□□□ -0.34
LINC00963-201ENST00000412141 RNF149Q8NC42 400 aa12.94□□□□□ -0.34
LINC00963-201ENST00000412141 ZSCAN31Q96LW9 406 aaPredicted RBP12.94□□□□□ -0.34
LINC00963-201ENST00000412141 ZNF558Q96NG5 402 aa12.94□□□□□ -0.34
LINC00963-201ENST00000412141 C1QTNF1Q9BXJ1 281 aa12.94□□□□□ -0.34
LINC00963-201ENST00000412141 GBP3Q9H0R5 595 aa12.94□□□□□ -0.34
LINC00963-201ENST00000412141 IFT122Q9HBG6 1241 aa12.94□□□□□ -0.34
LINC00963-201ENST00000412141 TLR9Q9NR96 1032 aa12.94□□□□□ -0.34
LINC00963-201ENST00000412141 CHST12Q9NRB3 414 aa12.94□□□□□ -0.34
LINC00963-201ENST00000412141 KIAA1671Q9BY89 1806 aa12.94□□□□□ -0.34
LINC00963-201ENST00000412141 FNDC1Q4ZHG4 1894 aaPredicted RBP12.93□□□□□ -0.34
LINC00963-201ENST00000412141 C5orf42Q9H799 3197 aa12.93□□□□□ -0.34
LINC00963-201ENST00000412141 EOMESO95936 686 aa12.93□□□□□ -0.34
LINC00963-201ENST00000412141 TECP42680 631 aa12.93□□□□□ -0.34
LINC00963-201ENST00000412141 CTC1Q2NKJ3 1217 aa12.93□□□□□ -0.34
LINC00963-201ENST00000412141 LLGL2Q6P1M3 1020 aa12.93□□□□□ -0.34
LINC00963-201ENST00000412141 FAM43BQ6ZT52 329 aaPredicted RBP12.93□□□□□ -0.34
LINC00963-201ENST00000412141 ZNF598Q86UK7 904 aaKnown RBP12.93□□□□□ -0.34
LINC00963-201ENST00000412141 LRRC43Q8N309 656 aa12.93□□□□□ -0.34
LINC00963-201ENST00000412141 MTMR9Q96QG7 549 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms