RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 SFNP31947 248 aa16.06■□□□□ 0.16
HLA-DQB2-229ENST00000411527 USP11P51784 963 aa16.06■□□□□ 0.16
HLA-DQB2-229ENST00000411527 JAK3P52333 1124 aa16.06■□□□□ 0.16
HLA-DQB2-229ENST00000411527 CCDC148Q8NFR7 591 aa16.06■□□□□ 0.16
HLA-DQB2-229ENST00000411527 SLC5A5Q92911 643 aa16.06■□□□□ 0.16
HLA-DQB2-229ENST00000411527 GJA10Q969M2 543 aa16.06■□□□□ 0.16
HLA-DQB2-229ENST00000411527 TMEM169Q96HH4 297 aa16.06■□□□□ 0.16
HLA-DQB2-229ENST00000411527 JAKMIP1Q96N16 626 aaKnown RBP16.06■□□□□ 0.16
HLA-DQB2-229ENST00000411527 TEKT3Q9BXF9 490 aa16.06■□□□□ 0.16
HLA-DQB2-229ENST00000411527 GCOM2Q9BZD3 368 aaPredicted RBP16.06■□□□□ 0.16
HLA-DQB2-229ENST00000411527 UNC45AQ9H3U1 944 aa16.06■□□□□ 0.16
HLA-DQB2-229ENST00000411527 SORCS3Q9UPU3 1222 aa16.06■□□□□ 0.16
HLA-DQB2-229ENST00000411527 H0Y858 1186 aa16.05■□□□□ 0.16
HLA-DQB2-229ENST00000411527 GFRA3O60609 400 aa16.05■□□□□ 0.16
HLA-DQB2-229ENST00000411527 CDC45O75419 566 aa16.05■□□□□ 0.16
HLA-DQB2-229ENST00000411527 MTHFRP42898 656 aa16.05■□□□□ 0.16
HLA-DQB2-229ENST00000411527 CDC42EP1Q00587 391 aa16.05■□□□□ 0.16
HLA-DQB2-229ENST00000411527 DRP2Q13474 957 aa16.05■□□□□ 0.16
HLA-DQB2-229ENST00000411527 MTMR3Q13615 1198 aa16.05■□□□□ 0.16
HLA-DQB2-229ENST00000411527 TARBP2Q15633 366 aaKnown RBP16.05■□□□□ 0.16
HLA-DQB2-229ENST00000411527 LONRF3Q496Y0 759 aa16.05■□□□□ 0.16
HLA-DQB2-229ENST00000411527 MTERF2Q49AM1 385 aa16.05■□□□□ 0.16
HLA-DQB2-229ENST00000411527 RARS2Q5T160 578 aaKnown RBP16.05■□□□□ 0.16
HLA-DQB2-229ENST00000411527 LRCH2Q5VUJ6 765 aa16.05■□□□□ 0.16
HLA-DQB2-229ENST00000411527 UBALD2Q8IYN6 164 aa16.05■□□□□ 0.16
HLA-DQB2-229ENST00000411527 VPS52Q8N1B4 723 aa16.05■□□□□ 0.16
HLA-DQB2-229ENST00000411527 C12orf76Q8N812 135 aaPredicted RBP16.05■□□□□ 0.16
HLA-DQB2-229ENST00000411527 TMEM87AQ8NBN3 555 aa16.05■□□□□ 0.16
HLA-DQB2-229ENST00000411527 AUTS2Q8WXX7 1259 aa16.05■□□□□ 0.16
HLA-DQB2-229ENST00000411527 SLC26A6Q9BXS9 759 aa16.05■□□□□ 0.16
HLA-DQB2-229ENST00000411527 CHST12Q9NRB3 414 aa16.05■□□□□ 0.16
HLA-DQB2-229ENST00000411527 VPS54Q9P1Q0 977 aa16.05■□□□□ 0.16
HLA-DQB2-229ENST00000411527 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.04■□□□□ 0.16
HLA-DQB2-229ENST00000411527 ZC3H11AO75152 810 aaKnown RBP eCLIP16.04■□□□□ 0.16
HLA-DQB2-229ENST00000411527 BRD1O95696 1058 aa16.04■□□□□ 0.16
HLA-DQB2-229ENST00000411527 PHKA2P46019 1235 aa16.04■□□□□ 0.16
HLA-DQB2-229ENST00000411527 DNM2P50570 870 aa16.04■□□□□ 0.16
HLA-DQB2-229ENST00000411527 NTRK3Q16288 839 aa16.04■□□□□ 0.16
HLA-DQB2-229ENST00000411527 KANK3Q6NY19 840 aa16.04■□□□□ 0.16
HLA-DQB2-229ENST00000411527 BLOC1S2Q6QNY1 142 aa16.04■□□□□ 0.16
HLA-DQB2-229ENST00000411527 MIER3Q7Z3K6 550 aa16.04■□□□□ 0.16
HLA-DQB2-229ENST00000411527 LPPQ93052 612 aa16.04■□□□□ 0.16
HLA-DQB2-229ENST00000411527 SH2D3AQ9BRG2 576 aa16.04■□□□□ 0.16
HLA-DQB2-229ENST00000411527 RNF26Q9BY78 433 aaPredicted RBP16.04■□□□□ 0.16
HLA-DQB2-229ENST00000411527 NIFKQ9BYG3 293 aaKnown RBP16.04■□□□□ 0.16
HLA-DQB2-229ENST00000411527 ZBP1Q9H171 429 aa16.04■□□□□ 0.16
HLA-DQB2-229ENST00000411527 SEPT9Q9UHD8 586 aaPredicted RBP16.04■□□□□ 0.16
HLA-DQB2-229ENST00000411527 NID2Q14112 1375 aa16.03■□□□□ 0.16
HLA-DQB2-229ENST00000411527 A0A087WZ62 844 aa16.03■□□□□ 0.16
HLA-DQB2-229ENST00000411527 TMEM150BA6NC51 233 aa16.03■□□□□ 0.16
HLA-DQB2-229ENST00000411527 PSMD10O75832 226 aa16.03■□□□□ 0.16
HLA-DQB2-229ENST00000411527 ASGR2P07307 311 aa16.03■□□□□ 0.16
HLA-DQB2-229ENST00000411527 EPCAMP16422 314 aa16.03■□□□□ 0.16
HLA-DQB2-229ENST00000411527 SFPQP23246 707 aaKnown RBP eCLIP16.03■□□□□ 0.16
HLA-DQB2-229ENST00000411527 NUBP1P53384 320 aa16.03■□□□□ 0.16
HLA-DQB2-229ENST00000411527 NLRP5P59047 1200 aa16.03■□□□□ 0.16
HLA-DQB2-229ENST00000411527 XKR3Q5GH77 459 aa16.03■□□□□ 0.16
HLA-DQB2-229ENST00000411527 ATAT1Q5SQI0 421 aa16.03■□□□□ 0.16
HLA-DQB2-229ENST00000411527 TWF2Q6IBS0 349 aaKnown RBP16.03■□□□□ 0.16
HLA-DQB2-229ENST00000411527 TMEM173Q86WV6 379 aaPredicted RBP16.03■□□□□ 0.16
HLA-DQB2-229ENST00000411527 TBCKQ8TEA7 893 aa16.03■□□□□ 0.16
HLA-DQB2-229ENST00000411527 KCNB2Q92953 911 aa16.03■□□□□ 0.16
HLA-DQB2-229ENST00000411527 FDXACB1Q9BRP7 624 aaPredicted RBP16.03■□□□□ 0.16
HLA-DQB2-229ENST00000411527 TRAIPQ9BWF2 469 aa16.03■□□□□ 0.16
HLA-DQB2-229ENST00000411527 INO80BQ9C086 356 aaPredicted RBP16.03■□□□□ 0.16
HLA-DQB2-229ENST00000411527 SMOC2Q9H3U7 446 aa16.03■□□□□ 0.16
HLA-DQB2-229ENST00000411527 DZANK1Q9NVP4 752 aa16.03■□□□□ 0.16
HLA-DQB2-229ENST00000411527 LIMD1Q9UGP4 676 aa16.03■□□□□ 0.16
HLA-DQB2-229ENST00000411527 SNX14Q9Y5W7 946 aa16.03■□□□□ 0.16
HLA-DQB2-229ENST00000411527 IGKV6-21A0A0C4DH24 114 aa16.02■□□□□ 0.16
HLA-DQB2-229ENST00000411527 DDX11L8A8MPP1 907 aa16.02■□□□□ 0.16
HLA-DQB2-229ENST00000411527 GALR2O43603 387 aaPredicted RBP16.02■□□□□ 0.16
HLA-DQB2-229ENST00000411527 STBD1O95210 358 aa16.02■□□□□ 0.16
HLA-DQB2-229ENST00000411527 SKIP12755 728 aa16.02■□□□□ 0.16
HLA-DQB2-229ENST00000411527 IFNAR1P17181 557 aa16.02■□□□□ 0.16
HLA-DQB2-229ENST00000411527 POLGP54098 1239 aaPredicted RBP16.02■□□□□ 0.16
HLA-DQB2-229ENST00000411527 CCT2P78371 535 aaKnown RBP16.02■□□□□ 0.16
HLA-DQB2-229ENST00000411527 GIT2Q14161 759 aa16.02■□□□□ 0.16
HLA-DQB2-229ENST00000411527 GLB1LQ6UWU2 654 aa16.02■□□□□ 0.16
HLA-DQB2-229ENST00000411527 DDX53Q86TM3 631 aaKnown RBP16.02■□□□□ 0.16
HLA-DQB2-229ENST00000411527 RHPN2Q8IUC4 686 aa16.02■□□□□ 0.16
HLA-DQB2-229ENST00000411527 TDRD5Q8NAT2 981 aaKnown RBP16.02■□□□□ 0.16
HLA-DQB2-229ENST00000411527 RDM1Q8NG50 284 aa16.02■□□□□ 0.16
HLA-DQB2-229ENST00000411527 IGSF21Q96ID5 467 aa16.02■□□□□ 0.16
HLA-DQB2-229ENST00000411527 CEP89Q96ST8 783 aa16.02■□□□□ 0.16
HLA-DQB2-229ENST00000411527 NRDE2Q9H7Z3 1164 aa16.02■□□□□ 0.16
HLA-DQB2-229ENST00000411527 SH3GLB2Q9NR46 395 aa16.02■□□□□ 0.16
HLA-DQB2-229ENST00000411527 TBC1D13Q9NVG8 400 aa16.02■□□□□ 0.16
HLA-DQB2-229ENST00000411527 SUCLA2Q9P2R7 463 aaPredicted RBP16.02■□□□□ 0.16
HLA-DQB2-229ENST00000411527 DBR1Q9UK59 544 aaKnown RBP16.02■□□□□ 0.16
HLA-DQB2-229ENST00000411527 PIN4Q9Y237 131 aaKnown RBP16.02■□□□□ 0.16
HLA-DQB2-229ENST00000411527 INPP5FQ9Y2H2 1132 aa16.02■□□□□ 0.16
HLA-DQB2-229ENST00000411527 IRAK3Q9Y616 596 aa16.02■□□□□ 0.16
HLA-DQB2-229ENST00000411527 MEIS3P2A8K0S8 358 aa16.01■□□□□ 0.15
HLA-DQB2-229ENST00000411527 MAFO75444 373 aaPredicted RBP16.01■□□□□ 0.15
HLA-DQB2-229ENST00000411527 GALTP07902 379 aa16.01■□□□□ 0.15
HLA-DQB2-229ENST00000411527 CTSAP10619 480 aa16.01■□□□□ 0.15
HLA-DQB2-229ENST00000411527 RPS6KB1P23443 525 aa16.01■□□□□ 0.15
HLA-DQB2-229ENST00000411527 RNASELQ05823 741 aaKnown RBP16.01■□□□□ 0.15
HLA-DQB2-229ENST00000411527 Q4G0T1 1027 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms