RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 POTEHQ6S545 545 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 DNERQ8NFT8 737 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 IL31RAQ8NI17 732 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 KIFAP3Q92845 792 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 ATG4CQ96DT6 458 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 PARD6BQ9BYG5 372 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 WRAP73Q9P2S5 460 aaPredicted RBP14.82□□□□□ -0.04
LIMS1-205ENST00000410093 FBXO40Q9UH90 709 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 SNX12Q9UMY4 172 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 PAPPA2Q9BXP8 1791 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 KIAA1217Q5T5P2 1943 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 RCCD1A6NED2 376 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 FAM155AB1AL88 458 aaPredicted RBP14.82□□□□□ -0.04
LIMS1-205ENST00000410093 ABL1P00519 1130 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 NR3C2P08235 984 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 PLEKP08567 350 aaPredicted RBP14.82□□□□□ -0.04
LIMS1-205ENST00000410093 MYCLP12524 364 aaPredicted RBP14.82□□□□□ -0.04
LIMS1-205ENST00000410093 STAT1P42224 750 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 BAATQ14032 418 aaPredicted RBP14.82□□□□□ -0.04
LIMS1-205ENST00000410093 NAB2Q15742 525 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 SNRNP48Q6IEG0 339 aaKnown RBP14.82□□□□□ -0.04
LIMS1-205ENST00000410093 DPY19L2P1Q6NXN4 242 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 WDR93Q6P2C0 686 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 NSMFQ6X4W1 530 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 SLC30A10Q6XR72 485 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 MOB2Q70IA6 237 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 USP37Q86T82 979 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 SPIRE2Q8WWL2 714 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 KCNN1Q92952 543 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 HOMER2Q9NSB8 354 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 GCNT4Q9P109 453 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 TRIM10Q9UDY6 481 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 ZNF214Q9UL59 606 aaPredicted RBP14.82□□□□□ -0.04
LIMS1-205ENST00000410093 HYOU1Q9Y4L1 999 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 AFG3L2Q9Y4W6 797 aa14.82□□□□□ -0.04
LIMS1-205ENST00000410093 SFI1A8K8P3 1242 aa14.81□□□□□ -0.04
LIMS1-205ENST00000410093 K7ENM7 598 aa14.81□□□□□ -0.04
LIMS1-205ENST00000410093 CES2O00748 559 aa14.81□□□□□ -0.04
LIMS1-205ENST00000410093 TLR2O60603 784 aa14.81□□□□□ -0.04
LIMS1-205ENST00000410093 ATP1A1P05023 1023 aaKnown RBP14.81□□□□□ -0.04
LIMS1-205ENST00000410093 PSAPP07602 524 aa14.81□□□□□ -0.04
LIMS1-205ENST00000410093 FMO5P49326 533 aa14.81□□□□□ -0.04
LIMS1-205ENST00000410093 NCKAP1LP55160 1127 aa14.81□□□□□ -0.04
LIMS1-205ENST00000410093 JAM2P57087 298 aa14.81□□□□□ -0.04
LIMS1-205ENST00000410093 MAP9Q49MG5 647 aa14.81□□□□□ -0.04
LIMS1-205ENST00000410093 CC2D1AQ6P1N0 951 aaPredicted RBP14.81□□□□□ -0.04
LIMS1-205ENST00000410093 IRF2BP2Q7Z5L9 587 aa14.81□□□□□ -0.04
LIMS1-205ENST00000410093 RASAL3Q86YV0 1011 aa14.81□□□□□ -0.04
LIMS1-205ENST00000410093 DAW1Q8N136 415 aa14.81□□□□□ -0.04
LIMS1-205ENST00000410093 MCPH1Q8NEM0 835 aa14.81□□□□□ -0.04
LIMS1-205ENST00000410093 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.81□□□□□ -0.04
LIMS1-205ENST00000410093 NTPCRQ9BSD7 190 aaKnown RBP14.81□□□□□ -0.04
LIMS1-205ENST00000410093 CRACR2AQ9BSW2 395 aa14.81□□□□□ -0.04
LIMS1-205ENST00000410093 STK33Q9BYT3 514 aa14.81□□□□□ -0.04
LIMS1-205ENST00000410093 PUF60Q9UHX1 559 aaKnown RBP14.81□□□□□ -0.04
LIMS1-205ENST00000410093 USP20Q9Y2K6 914 aa14.81□□□□□ -0.04
LIMS1-205ENST00000410093 PFASO15067 1338 aa14.8□□□□□ -0.04
LIMS1-205ENST00000410093 ARID2Q68CP9 1835 aa14.8□□□□□ -0.04
LIMS1-205ENST00000410093 MYH10P35580 1976 aa14.8□□□□□ -0.04
LIMS1-205ENST00000410093 THSD7BQ9C0I4 1608 aa14.8□□□□□ -0.04
LIMS1-205ENST00000410093 A0A0A6YYK5 440 aaPredicted RBP14.8□□□□□ -0.04
LIMS1-205ENST00000410093 MACROD2A1Z1Q3 448 aa14.8□□□□□ -0.04
LIMS1-205ENST00000410093 TESPA1A2RU30 521 aaPredicted RBP14.8□□□□□ -0.04
LIMS1-205ENST00000410093 DDX39AO00148 427 aaKnown RBP14.8□□□□□ -0.04
LIMS1-205ENST00000410093 CLIC2O15247 247 aa14.8□□□□□ -0.04
LIMS1-205ENST00000410093 EXOC3O60645 756 aa14.8□□□□□ -0.04
LIMS1-205ENST00000410093 IREB2P48200 963 aaKnown RBP14.8□□□□□ -0.04
LIMS1-205ENST00000410093 HMGCS2P54868 508 aa14.8□□□□□ -0.04
LIMS1-205ENST00000410093 GFPT1Q06210 699 aaPredicted RBP14.8□□□□□ -0.04
LIMS1-205ENST00000410093 BFSP1Q12934 665 aa14.8□□□□□ -0.04
LIMS1-205ENST00000410093 ZC2HC1CQ53FD0 456 aaPredicted RBP14.8□□□□□ -0.04
LIMS1-205ENST00000410093 LMBR1Q8WVP7 490 aa14.8□□□□□ -0.04
LIMS1-205ENST00000410093 ZKSCAN4Q969J2 545 aaPredicted RBP14.8□□□□□ -0.04
LIMS1-205ENST00000410093 A0A0G2JMZ2 1700 aa14.79□□□□□ -0.04
LIMS1-205ENST00000410093 PTPRFP10586 1907 aa14.79□□□□□ -0.04
LIMS1-205ENST00000410093 ZBTB39O15060 712 aa14.79□□□□□ -0.04
LIMS1-205ENST00000410093 SLC9A1P19634 815 aa14.79□□□□□ -0.04
LIMS1-205ENST00000410093 ICAM3P32942 547 aa14.79□□□□□ -0.04
LIMS1-205ENST00000410093 COPB2P35606 906 aa14.79□□□□□ -0.04
LIMS1-205ENST00000410093 PAFAH1B1P43034 410 aa14.79□□□□□ -0.04
LIMS1-205ENST00000410093 CASP4P49662 377 aa14.79□□□□□ -0.04
LIMS1-205ENST00000410093 GPS2Q13227 327 aa14.79□□□□□ -0.04
LIMS1-205ENST00000410093 FAM133AQ8N9E0 248 aa14.79□□□□□ -0.04
LIMS1-205ENST00000410093 XXYLT1Q8NBI6 393 aa14.79□□□□□ -0.04
LIMS1-205ENST00000410093 SLC10A4Q96EP9 437 aa14.79□□□□□ -0.04
LIMS1-205ENST00000410093 ZIC5Q96T25 663 aa14.79□□□□□ -0.04
LIMS1-205ENST00000410093 SIX2Q9NPC8 291 aa14.79□□□□□ -0.04
LIMS1-205ENST00000410093 CYP39A1Q9NYL5 469 aa14.79□□□□□ -0.04
LIMS1-205ENST00000410093 PCDHGC5Q9Y5F6 944 aa14.79□□□□□ -0.04
LIMS1-205ENST00000410093 SPATA31C2B4DYI2 1134 aa14.78□□□□□ -0.04
LIMS1-205ENST00000410093 DGAT1O75907 488 aa14.78□□□□□ -0.04
LIMS1-205ENST00000410093 PNMA6AP0CW24 399 aaPredicted RBP14.78□□□□□ -0.04
LIMS1-205ENST00000410093 ZSCAN20P17040 1043 aaPredicted RBP14.78□□□□□ -0.04
LIMS1-205ENST00000410093 NPEPPSP55786 919 aa14.78□□□□□ -0.04
LIMS1-205ENST00000410093 GABPB1Q06547 395 aaPredicted RBP14.78□□□□□ -0.04
LIMS1-205ENST00000410093 KCNA1Q09470 495 aa14.78□□□□□ -0.04
LIMS1-205ENST00000410093 DMP1Q13316 513 aaPredicted RBP14.78□□□□□ -0.04
LIMS1-205ENST00000410093 XKR9Q5GH70 373 aa14.78□□□□□ -0.04
LIMS1-205ENST00000410093 MIS18BP1Q6P0N0 1132 aa14.78□□□□□ -0.04
LIMS1-205ENST00000410093 HAUS6Q7Z4H7 955 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms