RNA–Protein interactions for RNA: ENST00000410007.5

PBRM1-208, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 4,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-208ENST00000410007 OR6J1Q8NGC5 347 aa9.74□□□□□ -0.85
PBRM1-208ENST00000410007 HDAC11Q96DB2 347 aa9.74□□□□□ -0.85
PBRM1-208ENST00000410007 ZNF560Q96MR9 790 aa9.74□□□□□ -0.85
PBRM1-208ENST00000410007 RBAKQ9NYW8 714 aaPredicted RBP9.74□□□□□ -0.85
PBRM1-208ENST00000410007 TLK1Q9UKI8 766 aa9.74□□□□□ -0.85
PBRM1-208ENST00000410007 STAP1Q9ULZ2 295 aa9.74□□□□□ -0.85
PBRM1-208ENST00000410007 UBE4BO95155 1302 aa9.74□□□□□ -0.85
PBRM1-208ENST00000410007 PDXKO00764 312 aa9.74□□□□□ -0.85
PBRM1-208ENST00000410007 GGPS1O95749 300 aa9.74□□□□□ -0.85
PBRM1-208ENST00000410007 PDHBP11177 359 aa9.74□□□□□ -0.85
PBRM1-208ENST00000410007 LLGL1Q15334 1064 aa9.74□□□□□ -0.85
PBRM1-208ENST00000410007 SHC4Q6S5L8 630 aa9.74□□□□□ -0.85
PBRM1-208ENST00000410007 SCN4BQ8IWT1 228 aa9.74□□□□□ -0.85
PBRM1-208ENST00000410007 NDUFAF2Q8N183 169 aa9.74□□□□□ -0.85
PBRM1-208ENST00000410007 SEPT1Q8WYJ6 367 aa9.74□□□□□ -0.85
PBRM1-208ENST00000410007 DEFB129Q9H1M3 183 aa9.74□□□□□ -0.85
PBRM1-208ENST00000410007 ABHD10Q9NUJ1 306 aa9.74□□□□□ -0.85
PBRM1-208ENST00000410007 INTS9Q9NV88 658 aaKnown RBP9.74□□□□□ -0.85
PBRM1-208ENST00000410007 ATP8A1Q9Y2Q0 1164 aa9.74□□□□□ -0.85
PBRM1-208ENST00000410007 ANGPTL3Q9Y5C1 460 aa9.74□□□□□ -0.85
PBRM1-208ENST00000410007 KIDINS220Q9ULH0 1771 aa9.74□□□□□ -0.85
PBRM1-208ENST00000410007 LRRC53A6NM62 1247 aa9.74□□□□□ -0.85
PBRM1-208ENST00000410007 MAFGO15525 162 aa9.74□□□□□ -0.85
PBRM1-208ENST00000410007 DR1Q01658 176 aa9.74□□□□□ -0.85
PBRM1-208ENST00000410007 XRRA1Q6P2D8 792 aa9.74□□□□□ -0.85
PBRM1-208ENST00000410007 TRIM72Q6ZMU5 477 aa9.74□□□□□ -0.85
PBRM1-208ENST00000410007 ELMOD1Q8N336 334 aa9.74□□□□□ -0.85
PBRM1-208ENST00000410007 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.74□□□□□ -0.85
PBRM1-208ENST00000410007 EDEM3Q9BZQ6 932 aa9.74□□□□□ -0.85
PBRM1-208ENST00000410007 SMARCAD1Q9H4L7 1026 aa9.74□□□□□ -0.85
PBRM1-208ENST00000410007 PFASO15067 1338 aa9.74□□□□□ -0.85
PBRM1-208ENST00000410007 SYNGAP1Q96PV0 1343 aa9.74□□□□□ -0.85
PBRM1-208ENST00000410007 PCK1P35558 622 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 PPARGP37231 505 aaPredicted RBP9.73□□□□□ -0.85
PBRM1-208ENST00000410007 MMP14P50281 582 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 COG7P83436 770 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 DHX9Q08211 1270 aaKnown RBP9.73□□□□□ -0.85
PBRM1-208ENST00000410007 LRRC31Q6UY01 552 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 LMNTD2Q8IXW0 634 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 ANKRD13AQ8IZ07 590 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.73□□□□□ -0.85
PBRM1-208ENST00000410007 WHAMMQ8TF30 809 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 KATNAL1Q9BW62 490 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 INTS2Q9H0H0 1204 aaKnown RBP9.73□□□□□ -0.85
PBRM1-208ENST00000410007 ZWILCHQ9H900 591 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 ZFYVE28Q9HCC9 887 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 EPB41L4AQ9HCS5 686 aaPredicted RBP9.73□□□□□ -0.85
PBRM1-208ENST00000410007 POLD4Q9HCU8 107 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 KCND2Q9NZV8 630 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 FBXO2Q9UK22 296 aaPredicted RBP9.73□□□□□ -0.85
PBRM1-208ENST00000410007 CSPG5O95196 566 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 PRR29P0C7W0 189 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 ZNF157P51786 506 aaPredicted RBP9.73□□□□□ -0.85
PBRM1-208ENST00000410007 FRMD5Q7Z6J6 570 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 RNF149Q8NC42 400 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 FBXL13Q8NEE6 735 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 EFCC1Q9HA90 598 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 SMYD2Q9NRG4 433 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 MID2Q9UJV3 735 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 PODXLO00592 558 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 CETPP11597 493 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 SDC4P31431 198 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 SF3A3Q12874 501 aaKnown RBP eCLIP9.73□□□□□ -0.85
PBRM1-208ENST00000410007 MXD4Q14582 209 aaPredicted RBP9.73□□□□□ -0.85
PBRM1-208ENST00000410007 RBBP5Q15291 538 aaKnown RBP9.73□□□□□ -0.85
PBRM1-208ENST00000410007 PPP6R3Q5H9R7 873 aaPredicted RBP9.73□□□□□ -0.85
PBRM1-208ENST00000410007 RWDD4Q6NW29 188 aaKnown RBP9.73□□□□□ -0.85
PBRM1-208ENST00000410007 RPUSD2Q8IZ73 545 aaKnown RBP9.73□□□□□ -0.85
PBRM1-208ENST00000410007 KCTD17Q8N5Z5 321 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 CHST13Q8NET6 341 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 SAAL1Q96ER3 474 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 NUDCD1Q96RS6 583 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 CCDC151A5D8V7 595 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 MAGEB2O15479 319 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 GH1P01241 217 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 GYS1P13807 737 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 IRX4P78413 519 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 C2orf54Q08AI8 447 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 EZH2Q15910 746 aaKnown RBP9.73□□□□□ -0.85
PBRM1-208ENST00000410007 BBS9Q3SYG4 887 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 CENPUQ71F23 418 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 SMAP1Q8IYB5 467 aaPredicted RBP9.73□□□□□ -0.85
PBRM1-208ENST00000410007 HSPH1Q92598 858 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 HINFPQ9BQA5 517 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 TRIM9Q9C026 710 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 LMCD1Q9NZU5 365 aa9.73□□□□□ -0.85
PBRM1-208ENST00000410007 A0A1W2PQC6 194 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 FGGP02679 453 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 MT-ND3P03897 115 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 CUL1Q13616 776 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 TSTA3Q13630 321 aaPredicted RBP9.72□□□□□ -0.85
PBRM1-208ENST00000410007 DRAP1Q14919 205 aaPredicted RBP9.72□□□□□ -0.85
PBRM1-208ENST00000410007 CYFIP1Q7L576 1253 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 ATP6V1E2Q96A05 226 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 FMO2Q99518 471 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 C11orf70Q9BRQ4 267 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 RGL1Q9NZL6 768 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 ANO9A1A5B4 782 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 PRKCBP05771 671 aa9.72□□□□□ -0.85
PBRM1-208ENST00000410007 GNA15P30679 374 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms