RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 NELFCDQ8IXH7 590 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 REPS2Q8NFH8 660 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 NLGN2Q8NFZ4 835 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.23□□□□□ -1.09
CXCR4-202ENST00000409817 C1orf216Q8TAB5 229 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 TMEM174Q8WUU8 243 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 ATG4CQ96DT6 458 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 EEF2KMTQ96G04 330 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 RMDN3Q96TC7 470 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 TEX13BQ9BXU2 312 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 TSGA10Q9BZW7 698 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 SPON1Q9HCB6 807 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 PXMP2Q9NR77 195 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 RNF146Q9NTX7 359 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 AGPAT5Q9NUQ2 364 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 CEP72Q9P209 647 aa8.23□□□□□ -1.09
CXCR4-202ENST00000409817 CGNQ9P2M7 1197 aaKnown RBP8.23□□□□□ -1.09
CXCR4-202ENST00000409817 ARMCX3Q9UH62 379 aaPredicted RBP8.23□□□□□ -1.09
CXCR4-202ENST00000409817 CDV3Q9UKY7 258 aaKnown RBP8.23□□□□□ -1.09
CXCR4-202ENST00000409817 SSU72P8A0A1W2PR75 194 aa8.22□□□□□ -1.09
CXCR4-202ENST00000409817 EFCAB8A8MWE9 144 aa8.22□□□□□ -1.09
CXCR4-202ENST00000409817 WDR64B1ANS9 1081 aa8.22□□□□□ -1.09
CXCR4-202ENST00000409817 PRMT3O60678 531 aa8.22□□□□□ -1.09
CXCR4-202ENST00000409817 LGR5O75473 907 aa8.22□□□□□ -1.09
CXCR4-202ENST00000409817 URI1O94763 535 aaPredicted RBP8.22□□□□□ -1.09
CXCR4-202ENST00000409817 GCNT3O95395 438 aa8.22□□□□□ -1.09
CXCR4-202ENST00000409817 EPB41P11171 864 aaKnown RBP8.22□□□□□ -1.09
CXCR4-202ENST00000409817 QARSP47897 775 aaKnown RBP8.22□□□□□ -1.09
CXCR4-202ENST00000409817 HMGCS2P54868 508 aa8.22□□□□□ -1.09
CXCR4-202ENST00000409817 SNRPFP62306 86 aaKnown RBP8.22□□□□□ -1.09
CXCR4-202ENST00000409817 MRPS9P82933 396 aaKnown RBP8.22□□□□□ -1.09
CXCR4-202ENST00000409817 USP4Q13107 963 aa8.22□□□□□ -1.09
CXCR4-202ENST00000409817 SPA17Q15506 151 aa8.22□□□□□ -1.09
CXCR4-202ENST00000409817 ARHGEF16Q5VV41 709 aa8.22□□□□□ -1.09
CXCR4-202ENST00000409817 HS2ST1Q7LGA3 356 aa8.22□□□□□ -1.09
CXCR4-202ENST00000409817 CACNA2D4Q7Z3S7 1137 aa8.22□□□□□ -1.09
CXCR4-202ENST00000409817 C4orf19Q8IY42 314 aa8.22□□□□□ -1.09
CXCR4-202ENST00000409817 PDCL2Q8N4E4 241 aa8.22□□□□□ -1.09
CXCR4-202ENST00000409817 MYCT1Q8N699 235 aa8.22□□□□□ -1.09
CXCR4-202ENST00000409817 MNS1Q8NEH6 495 aa8.22□□□□□ -1.09
CXCR4-202ENST00000409817 NSUN6Q8TEA1 469 aaKnown RBP8.22□□□□□ -1.09
CXCR4-202ENST00000409817 PIGOQ8TEQ8 1089 aa8.22□□□□□ -1.09
CXCR4-202ENST00000409817 ZKSCAN4Q969J2 545 aaPredicted RBP8.22□□□□□ -1.09
CXCR4-202ENST00000409817 CCDC42Q96M95 316 aa8.22□□□□□ -1.09
CXCR4-202ENST00000409817 TAAR1Q96RJ0 339 aa8.22□□□□□ -1.09
CXCR4-202ENST00000409817 CHP1Q99653 195 aa8.22□□□□□ -1.09
CXCR4-202ENST00000409817 SENP7Q9BQF6 1050 aa8.22□□□□□ -1.09
CXCR4-202ENST00000409817 FGFBP2Q9BYJ0 223 aa8.22□□□□□ -1.09
CXCR4-202ENST00000409817 MMRN2Q9H8L6 949 aa8.22□□□□□ -1.09
CXCR4-202ENST00000409817 NHEJ1Q9H9Q4 299 aaPredicted RBP8.22□□□□□ -1.09
CXCR4-202ENST00000409817 LZTFL1Q9NQ48 299 aa8.22□□□□□ -1.09
CXCR4-202ENST00000409817 ADARB2Q9NS39 739 aaKnown RBP8.22□□□□□ -1.09
CXCR4-202ENST00000409817 LARSQ9P2J5 1176 aaKnown RBP8.22□□□□□ -1.09
CXCR4-202ENST00000409817 MYO6Q9UM54 1294 aa8.22□□□□□ -1.09
CXCR4-202ENST00000409817 SCAF8Q9UPN6 1271 aaKnown RBP8.22□□□□□ -1.09
CXCR4-202ENST00000409817 DAAM1Q9Y4D1 1078 aa8.22□□□□□ -1.09
CXCR4-202ENST00000409817 MAP4K5Q9Y4K4 846 aa8.22□□□□□ -1.09
CXCR4-202ENST00000409817 AFG3L2Q9Y4W6 797 aa8.22□□□□□ -1.09
CXCR4-202ENST00000409817 RLFQ13129 1914 aa8.22□□□□□ -1.09
CXCR4-202ENST00000409817 GTPBP10A4D1E9 387 aaKnown RBP8.21□□□□□ -1.09
CXCR4-202ENST00000409817 CTAGE9A4FU28 777 aa8.21□□□□□ -1.09
CXCR4-202ENST00000409817 LCA5LO95447 670 aa8.21□□□□□ -1.09
CXCR4-202ENST00000409817 NR3C1P04150 777 aa8.21□□□□□ -1.09
CXCR4-202ENST00000409817 MYBP10242 640 aa8.21□□□□□ -1.09
CXCR4-202ENST00000409817 XRCC5P13010 732 aaKnown RBP8.21□□□□□ -1.09
CXCR4-202ENST00000409817 CASP5P51878 434 aa8.21□□□□□ -1.09
CXCR4-202ENST00000409817 RAB15P59190 212 aa8.21□□□□□ -1.09
CXCR4-202ENST00000409817 SNRNP48Q6IEG0 339 aaKnown RBP8.21□□□□□ -1.09
CXCR4-202ENST00000409817 ZNF746Q6NUN9 644 aaPredicted RBP8.21□□□□□ -1.09
CXCR4-202ENST00000409817 NSMFQ6X4W1 530 aa8.21□□□□□ -1.09
CXCR4-202ENST00000409817 ZNF720Q7Z2F6 126 aa8.21□□□□□ -1.09
CXCR4-202ENST00000409817 VSIG10LQ86VR7 867 aa8.21□□□□□ -1.09
CXCR4-202ENST00000409817 FAM178BQ8IXR5 827 aa8.21□□□□□ -1.09
CXCR4-202ENST00000409817 SMAP1Q8IYB5 467 aaPredicted RBP8.21□□□□□ -1.09
CXCR4-202ENST00000409817 ACRBPQ8NEB7 543 aa8.21□□□□□ -1.09
CXCR4-202ENST00000409817 CHST13Q8NET6 341 aa8.21□□□□□ -1.09
CXCR4-202ENST00000409817 IL31RAQ8NI17 732 aa8.21□□□□□ -1.09
CXCR4-202ENST00000409817 WDR24Q96S15 920 aa8.21□□□□□ -1.09
CXCR4-202ENST00000409817 IWS1Q96ST2 819 aa8.21□□□□□ -1.09
CXCR4-202ENST00000409817 TMEM206Q9H813 350 aa8.21□□□□□ -1.09
CXCR4-202ENST00000409817 ACAD9Q9H845 621 aa8.21□□□□□ -1.09
CXCR4-202ENST00000409817 LUC7LQ9NQ29 371 aaKnown RBP8.21□□□□□ -1.09
CXCR4-202ENST00000409817 PLCB1Q9NQ66 1216 aa8.21□□□□□ -1.09
CXCR4-202ENST00000409817 HOMER2Q9NSB8 354 aa8.21□□□□□ -1.09
CXCR4-202ENST00000409817 FAM207AQ9NSI2 230 aaPredicted RBP8.21□□□□□ -1.09
CXCR4-202ENST00000409817 ANKEF1Q9NU02 776 aa8.21□□□□□ -1.09
CXCR4-202ENST00000409817 FBXL5Q9UKA1 691 aa8.21□□□□□ -1.09
CXCR4-202ENST00000409817 ZNF214Q9UL59 606 aaPredicted RBP8.21□□□□□ -1.09
CXCR4-202ENST00000409817 MRFAP1Q9Y605 127 aa8.21□□□□□ -1.09
CXCR4-202ENST00000409817 SBF1O95248 1867 aa8.21□□□□□ -1.09
CXCR4-202ENST00000409817 ASTN1O14525 1302 aa8.21□□□□□ -1.09
CXCR4-202ENST00000409817 SSC5DA1L4H1 1573 aa8.21□□□□□ -1.1
CXCR4-202ENST00000409817 RSPH10B2B2RC85 870 aa8.21□□□□□ -1.1
CXCR4-202ENST00000409817 ERVH48-1M5A8F1 160 aa8.21□□□□□ -1.1
CXCR4-202ENST00000409817 PRPF6O94906 941 aaKnown RBP8.21□□□□□ -1.1
CXCR4-202ENST00000409817 AFPP02771 609 aaKnown RBP8.21□□□□□ -1.1
CXCR4-202ENST00000409817 NR3C2P08235 984 aa8.21□□□□□ -1.1
CXCR4-202ENST00000409817 RSPH10BP0C881 870 aa8.21□□□□□ -1.1
CXCR4-202ENST00000409817 EIF2AK2P19525 551 aaKnown RBP8.21□□□□□ -1.1
CXCR4-202ENST00000409817 VARSP26640 1264 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms