RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 BUB1O43683 1085 aa21.94■■□□□ 1.1
USP39-204ENST00000409766 KLRC1P26715 233 aa21.94■■□□□ 1.1
USP39-204ENST00000409766 ANXA13P27216 316 aa21.94■■□□□ 1.1
USP39-204ENST00000409766 SNRPFP62306 86 aaKnown RBP21.94■■□□□ 1.1
USP39-204ENST00000409766 KIAA0753Q2KHM9 967 aa21.94■■□□□ 1.1
USP39-204ENST00000409766 CREG2Q8IUH2 290 aa21.94■■□□□ 1.1
USP39-204ENST00000409766 SLC17A8Q8NDX2 589 aa21.94■■□□□ 1.1
USP39-204ENST00000409766 HNRNPLLQ8WVV9 542 aaKnown RBP21.94■■□□□ 1.1
USP39-204ENST00000409766 CBWD1Q9BRT8 395 aa21.94■■□□□ 1.1
USP39-204ENST00000409766 PCIF1Q9H4Z3 704 aa21.94■■□□□ 1.1
USP39-204ENST00000409766 JPH1Q9HDC5 661 aaPredicted RBP21.94■■□□□ 1.1
USP39-204ENST00000409766 OTOFQ9HC10 1997 aa21.94■■□□□ 1.1
USP39-204ENST00000409766 SPATA31C2B4DYI2 1134 aa21.94■■□□□ 1.1
USP39-204ENST00000409766 PDE2AO00408 941 aaPredicted RBP21.94■■□□□ 1.1
USP39-204ENST00000409766 TBC1D8O95759 1140 aa21.94■■□□□ 1.1
USP39-204ENST00000409766 TREML2Q5T2D2 321 aa21.94■■□□□ 1.1
USP39-204ENST00000409766 INTS8Q75QN2 995 aaKnown RBP21.94■■□□□ 1.1
USP39-204ENST00000409766 OTUD6AQ7L8S5 288 aa21.94■■□□□ 1.1
USP39-204ENST00000409766 ATP6V0A1Q93050 837 aa21.94■■□□□ 1.1
USP39-204ENST00000409766 IWS1Q96ST2 819 aa21.94■■□□□ 1.1
USP39-204ENST00000409766 SYT17Q9BSW7 474 aa21.94■■□□□ 1.1
USP39-204ENST00000409766 PACSIN1Q9BY11 444 aa21.94■■□□□ 1.1
USP39-204ENST00000409766 ADARB2Q9NS39 739 aaKnown RBP21.94■■□□□ 1.1
USP39-204ENST00000409766 TELO2Q9Y4R8 837 aa21.94■■□□□ 1.1
USP39-204ENST00000409766 PSAPP07602 524 aa21.93■■□□□ 1.1
USP39-204ENST00000409766 MYL7Q01449 175 aa21.93■■□□□ 1.1
USP39-204ENST00000409766 STK33Q9BYT3 514 aa21.93■■□□□ 1.1
USP39-204ENST00000409766 SLC9A2Q9UBY0 812 aa21.93■■□□□ 1.1
USP39-204ENST00000409766 NAGPAQ9UK23 515 aa21.93■■□□□ 1.1
USP39-204ENST00000409766 NENFQ9UMX5 172 aa21.93■■□□□ 1.1
USP39-204ENST00000409766 BTNL10A8MVZ5 291 aa21.92■■□□□ 1.1
USP39-204ENST00000409766 KRT13P13646 458 aa21.92■■□□□ 1.1
USP39-204ENST00000409766 STAT1P42224 750 aa21.92■■□□□ 1.1
USP39-204ENST00000409766 GNPTABQ3T906 1256 aa21.92■■□□□ 1.1
USP39-204ENST00000409766 XXYLT1Q8NBI6 393 aa21.92■■□□□ 1.1
USP39-204ENST00000409766 TMEM161BQ8NDZ6 487 aa21.92■■□□□ 1.1
USP39-204ENST00000409766 CHST13Q8NET6 341 aa21.92■■□□□ 1.1
USP39-204ENST00000409766 OSBPL9Q96SU4 736 aa21.92■■□□□ 1.1
USP39-204ENST00000409766 TLR10Q9BXR5 811 aa21.92■■□□□ 1.1
USP39-204ENST00000409766 INTS2Q9H0H0 1204 aaKnown RBP21.92■■□□□ 1.1
USP39-204ENST00000409766 HSPBP1Q9NZL4 362 aa21.92■■□□□ 1.1
USP39-204ENST00000409766 F8VZ95 297 aa21.92■■□□□ 1.1
USP39-204ENST00000409766 DKC1O60832 514 aaKnown RBP eCLIP21.92■■□□□ 1.1
USP39-204ENST00000409766 TUBBP07437 444 aa21.92■■□□□ 1.1
USP39-204ENST00000409766 FERP16591 822 aa21.92■■□□□ 1.1
USP39-204ENST00000409766 TCP1P17987 556 aaKnown RBP21.92■■□□□ 1.1
USP39-204ENST00000409766 NPTX2P47972 431 aa21.92■■□□□ 1.1
USP39-204ENST00000409766 NAP1L1P55209 391 aaKnown RBP21.92■■□□□ 1.1
USP39-204ENST00000409766 DLG4P78352 724 aa21.92■■□□□ 1.1
USP39-204ENST00000409766 SWSAP1Q6NVH7 229 aa21.92■■□□□ 1.1
USP39-204ENST00000409766 LBX2Q6XYB7 198 aa21.92■■□□□ 1.1
USP39-204ENST00000409766 LMO3Q8TAP4 145 aa21.92■■□□□ 1.1
USP39-204ENST00000409766 COG1Q8WTW3 980 aa21.92■■□□□ 1.1
USP39-204ENST00000409766 CNKSR2Q8WXI2 1034 aa21.92■■□□□ 1.1
USP39-204ENST00000409766 CEP170P1Q96L14 293 aa21.92■■□□□ 1.1
USP39-204ENST00000409766 DNAJC12Q9UKB3 198 aa21.92■■□□□ 1.1
USP39-204ENST00000409766 HYOU1Q9Y4L1 999 aa21.92■■□□□ 1.1
USP39-204ENST00000409766 PCDHGC5Q9Y5F6 944 aa21.92■■□□□ 1.1
USP39-204ENST00000409766 A0A0G2JMZ2 1700 aa21.91■■□□□ 1.1
USP39-204ENST00000409766 MAPK13O15264 365 aa21.91■■□□□ 1.1
USP39-204ENST00000409766 VAMP7P51809 220 aa21.91■■□□□ 1.1
USP39-204ENST00000409766 ACTR2P61160 394 aa21.91■■□□□ 1.1
USP39-204ENST00000409766 NFRKBQ6P4R8 1299 aa21.91■■□□□ 1.1
USP39-204ENST00000409766 ABHD15Q6UXT9 468 aa21.91■■□□□ 1.1
USP39-204ENST00000409766 ZNF572Q7Z3I7 529 aaPredicted RBP21.91■■□□□ 1.1
USP39-204ENST00000409766 DNERQ8NFT8 737 aa21.91■■□□□ 1.1
USP39-204ENST00000409766 CAGE1Q8TC20 777 aa21.91■■□□□ 1.1
USP39-204ENST00000409766 NTPCRQ9BSD7 190 aaKnown RBP21.91■■□□□ 1.1
USP39-204ENST00000409766 APEX2Q9UBZ4 518 aa21.91■■□□□ 1.1
USP39-204ENST00000409766 TBX20Q9UMR3 447 aa21.91■■□□□ 1.1
USP39-204ENST00000409766 DAAM1Q9Y4D1 1078 aa21.91■■□□□ 1.1
USP39-204ENST00000409766 SASH3O75995 380 aa21.9■■□□□ 1.1
USP39-204ENST00000409766 SOX5P35711 763 aa21.9■■□□□ 1.1
USP39-204ENST00000409766 SMTNP53814 917 aa21.9■■□□□ 1.1
USP39-204ENST00000409766 VSNL1P62760 191 aa21.9■■□□□ 1.1
USP39-204ENST00000409766 DMP1Q13316 513 aaPredicted RBP21.9■■□□□ 1.1
USP39-204ENST00000409766 LONRF2Q1L5Z9 754 aa21.9■■□□□ 1.1
USP39-204ENST00000409766 WDR93Q6P2C0 686 aa21.9■■□□□ 1.1
USP39-204ENST00000409766 ALKBH5Q6P6C2 394 aaKnown RBP21.9■■□□□ 1.1
USP39-204ENST00000409766 CCDC60Q8IWA6 550 aaPredicted RBP21.9■■□□□ 1.1
USP39-204ENST00000409766 ZSWIM2Q8NEG5 633 aa21.9■■□□□ 1.1
USP39-204ENST00000409766 KIFAP3Q92845 792 aa21.9■■□□□ 1.1
USP39-204ENST00000409766 DCPSQ96C86 337 aaKnown RBP21.9■■□□□ 1.1
USP39-204ENST00000409766 HVCN1Q96D96 273 aa21.9■■□□□ 1.1
USP39-204ENST00000409766 FUT8Q9BYC5 575 aa21.9■■□□□ 1.1
USP39-204ENST00000409766 GPR88Q9GZN0 384 aa21.9■■□□□ 1.1
USP39-204ENST00000409766 C17orf75Q9HAS0 396 aa21.9■■□□□ 1.1
USP39-204ENST00000409766 PDLIM7Q9NR12 457 aa21.9■■□□□ 1.1
USP39-204ENST00000409766 CCDC169A6NNP5 214 aa21.9■■□□□ 1.1
USP39-204ENST00000409766 ADM5C9JUS6 153 aa21.9■■□□□ 1.1
USP39-204ENST00000409766 NCK2O43639 380 aa21.9■■□□□ 1.1
USP39-204ENST00000409766 EVI5O60447 810 aa21.9■■□□□ 1.1
USP39-204ENST00000409766 GFPT2O94808 682 aa21.9■■□□□ 1.1
USP39-204ENST00000409766 MCCD1P59942 119 aaPredicted RBP21.9■■□□□ 1.1
USP39-204ENST00000409766 DRAP1Q14919 205 aaPredicted RBP21.9■■□□□ 1.1
USP39-204ENST00000409766 C1orf220Q5T0J3 134 aa21.9■■□□□ 1.1
USP39-204ENST00000409766 SPIRE2Q8WWL2 714 aa21.9■■□□□ 1.1
USP39-204ENST00000409766 BSNDQ8WZ55 320 aa21.9■■□□□ 1.1
USP39-204ENST00000409766 TSKSQ9UJT2 592 aa21.9■■□□□ 1.1
USP39-204ENST00000409766 CSADQ9Y600 493 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms