RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 ZMYM2Q9UBW7 1377 aa18.56■□□□□ 0.56
SSB-202ENST00000409333 RRN3P2A6NIE6 340 aa18.55■□□□□ 0.56
SSB-202ENST00000409333 EIF3DO15371 548 aaKnown RBP eCLIP18.55■□□□□ 0.56
SSB-202ENST00000409333 MAGEB2O15479 319 aa18.55■□□□□ 0.56
SSB-202ENST00000409333 CENPPQ6IPU0 288 aa18.55■□□□□ 0.56
SSB-202ENST00000409333 HAUS6Q7Z4H7 955 aa18.55■□□□□ 0.56
SSB-202ENST00000409333 PCSK9Q8NBP7 692 aaKnown RBP18.55■□□□□ 0.56
SSB-202ENST00000409333 RETREG2Q8NC44 543 aa18.55■□□□□ 0.56
SSB-202ENST00000409333 SPIRE2Q8WWL2 714 aa18.55■□□□□ 0.56
SSB-202ENST00000409333 PAK6Q9NQU5 681 aaPredicted RBP18.55■□□□□ 0.56
SSB-202ENST00000409333 HDAC6Q9UBN7 1215 aa18.55■□□□□ 0.56
SSB-202ENST00000409333 NFE2L3Q9Y4A8 694 aa18.55■□□□□ 0.56
SSB-202ENST00000409333 SMTNL1A8MU46 457 aa18.55■□□□□ 0.56
SSB-202ENST00000409333 GOLGA6L19H0YKK7 550 aa18.55■□□□□ 0.56
SSB-202ENST00000409333 MRE11P49959 708 aa18.55■□□□□ 0.56
SSB-202ENST00000409333 SMTNP53814 917 aa18.55■□□□□ 0.56
SSB-202ENST00000409333 CAPSQ13938 189 aa18.55■□□□□ 0.56
SSB-202ENST00000409333 NBPF20Q3BBV1 942 aa18.55■□□□□ 0.56
SSB-202ENST00000409333 ANKRD40Q6AI12 368 aa18.55■□□□□ 0.56
SSB-202ENST00000409333 TTI2Q6NXR4 508 aa18.55■□□□□ 0.56
SSB-202ENST00000409333 NFRKBQ6P4R8 1299 aa18.55■□□□□ 0.56
SSB-202ENST00000409333 C7orf31Q8N865 590 aa18.55■□□□□ 0.56
SSB-202ENST00000409333 TMEM161BQ8NDZ6 487 aa18.55■□□□□ 0.56
SSB-202ENST00000409333 PSPC1Q8WXF1 523 aaKnown RBP18.55■□□□□ 0.56
SSB-202ENST00000409333 NTPCRQ9BSD7 190 aaKnown RBP18.55■□□□□ 0.56
SSB-202ENST00000409333 IKZF4Q9H2S9 585 aa18.55■□□□□ 0.56
SSB-202ENST00000409333 KCTD10Q9H3F6 313 aa18.55■□□□□ 0.56
SSB-202ENST00000409333 SUCLA2Q9P2R7 463 aaPredicted RBP18.55■□□□□ 0.56
SSB-202ENST00000409333 UBE4BO95155 1302 aa18.55■□□□□ 0.56
SSB-202ENST00000409333 KIF20AO95235 890 aa18.54■□□□□ 0.56
SSB-202ENST00000409333 CCL5P13501 91 aa18.54■□□□□ 0.56
SSB-202ENST00000409333 ADAM17P78536 824 aa18.54■□□□□ 0.56
SSB-202ENST00000409333 ZNF200P98182 395 aaPredicted RBP18.54■□□□□ 0.56
SSB-202ENST00000409333 GTF2BQ00403 316 aa18.54■□□□□ 0.56
SSB-202ENST00000409333 KNOP1Q1ED39 458 aaKnown RBP18.54■□□□□ 0.56
SSB-202ENST00000409333 HSP90AA4PQ58FG1 418 aa18.54■□□□□ 0.56
SSB-202ENST00000409333 SPATA1Q5VX52 437 aa18.54■□□□□ 0.56
SSB-202ENST00000409333 RHPN2Q8IUC4 686 aa18.54■□□□□ 0.56
SSB-202ENST00000409333 DUSP9Q99956 384 aaKnown RBP18.54■□□□□ 0.56
SSB-202ENST00000409333 ST6GALNAC4Q9H4F1 302 aa18.54■□□□□ 0.56
SSB-202ENST00000409333 FANCLQ9NW38 375 aa18.54■□□□□ 0.56
SSB-202ENST00000409333 PCDHB13Q9Y5F0 798 aa18.54■□□□□ 0.56
SSB-202ENST00000409333 BICDL2A1A5D9 508 aa18.53■□□□□ 0.56
SSB-202ENST00000409333 LRRIQ4A6NIV6 560 aa18.53■□□□□ 0.56
SSB-202ENST00000409333 HOXC8P31273 242 aa18.53■□□□□ 0.56
SSB-202ENST00000409333 NAMPTP43490 491 aa18.53■□□□□ 0.56
SSB-202ENST00000409333 DNM2P50570 870 aa18.53■□□□□ 0.56
SSB-202ENST00000409333 ACLYP53396 1101 aa18.53■□□□□ 0.56
SSB-202ENST00000409333 LAMTOR4Q0VGL1 99 aa18.53■□□□□ 0.56
SSB-202ENST00000409333 PPP2R5AQ15172 486 aa18.53■□□□□ 0.56
SSB-202ENST00000409333 ZCWPW2Q504Y3 356 aa18.53■□□□□ 0.56
SSB-202ENST00000409333 FBXO46Q6PJ61 603 aaPredicted RBP18.53■□□□□ 0.56
SSB-202ENST00000409333 STXBP4Q6ZWJ1 553 aa18.53■□□□□ 0.56
SSB-202ENST00000409333 SLC17A8Q8NDX2 589 aa18.53■□□□□ 0.56
SSB-202ENST00000409333 DEFB118Q96PH6 123 aa18.53■□□□□ 0.56
SSB-202ENST00000409333 SAMSN1Q9NSI8 373 aaKnown RBP18.53■□□□□ 0.56
SSB-202ENST00000409333 ARHGAP28Q9P2N2 729 aa18.53■□□□□ 0.56
SSB-202ENST00000409333 C17orf102A2RUQ5 167 aa18.53■□□□□ 0.56
SSB-202ENST00000409333 DENND3A2RUS2 1198 aa18.53■□□□□ 0.56
SSB-202ENST00000409333 MBLAC1A4D2B0 266 aaPredicted RBP18.53■□□□□ 0.56
SSB-202ENST00000409333 TREHO43280 583 aa18.53■□□□□ 0.56
SSB-202ENST00000409333 ALCAMQ13740 583 aa18.53■□□□□ 0.56
SSB-202ENST00000409333 MXD4Q14582 209 aaPredicted RBP18.53■□□□□ 0.56
SSB-202ENST00000409333 UVSSAQ2YD98 709 aa18.53■□□□□ 0.56
SSB-202ENST00000409333 ZNF668Q96K58 619 aaPredicted RBP18.53■□□□□ 0.56
SSB-202ENST00000409333 RNF208Q9H0X6 261 aa18.53■□□□□ 0.56
SSB-202ENST00000409333 VTNP04004 478 aa18.52■□□□□ 0.55
SSB-202ENST00000409333 SRGAP2CP0DJJ0 459 aa18.52■□□□□ 0.55
SSB-202ENST00000409333 ATP1A3P13637 1013 aa18.52■□□□□ 0.55
SSB-202ENST00000409333 LRRC63Q05C16 580 aa18.52■□□□□ 0.55
SSB-202ENST00000409333 TPD52L1Q16890 204 aaPredicted RBP18.52■□□□□ 0.55
SSB-202ENST00000409333 RUFY4Q6ZNE9 571 aa18.52■□□□□ 0.55
SSB-202ENST00000409333 TAS1R3Q7RTX0 852 aa18.52■□□□□ 0.55
SSB-202ENST00000409333 EEF2KMTQ96G04 330 aa18.52■□□□□ 0.55
SSB-202ENST00000409333 PPP1R16BQ96T49 567 aa18.52■□□□□ 0.55
SSB-202ENST00000409333 GTF2IRD1Q9UHL9 959 aa18.52■□□□□ 0.55
SSB-202ENST00000409333 AKT3Q9Y243 479 aa18.52■□□□□ 0.55
SSB-202ENST00000409333 GRIN2DO15399 1336 aa18.52■□□□□ 0.55
SSB-202ENST00000409333 MOXD2PA6NHM9 499 aa18.51■□□□□ 0.55
SSB-202ENST00000409333 TGFB1I1O43294 461 aa18.51■□□□□ 0.55
SSB-202ENST00000409333 CYP2C9P11712 490 aa18.51■□□□□ 0.55
SSB-202ENST00000409333 TMOD1P28289 359 aa18.51■□□□□ 0.55
SSB-202ENST00000409333 FAM47CQ5HY64 1035 aa18.51■□□□□ 0.55
SSB-202ENST00000409333 KIAA0319LQ8IZA0 1049 aa18.51■□□□□ 0.55
SSB-202ENST00000409333 RNF149Q8NC42 400 aa18.51■□□□□ 0.55
SSB-202ENST00000409333 ARRDC4Q8NCT1 418 aa18.51■□□□□ 0.55
SSB-202ENST00000409333 DEPTORQ8TB45 409 aa18.51■□□□□ 0.55
SSB-202ENST00000409333 ZNF333Q96JL9 665 aa18.51■□□□□ 0.55
SSB-202ENST00000409333 NLRP4Q96MN2 994 aa18.51■□□□□ 0.55
SSB-202ENST00000409333 TSG101Q99816 390 aa18.51■□□□□ 0.55
SSB-202ENST00000409333 TSEN34Q9BSV6 310 aaKnown RBP18.51■□□□□ 0.55
SSB-202ENST00000409333 FAM49AQ9H0Q0 323 aaPredicted RBP18.51■□□□□ 0.55
SSB-202ENST00000409333 TYW1Q9NV66 732 aaKnown RBP18.51■□□□□ 0.55
SSB-202ENST00000409333 TBX20Q9UMR3 447 aa18.51■□□□□ 0.55
SSB-202ENST00000409333 AP5Z1O43299 807 aa18.5■□□□□ 0.55
SSB-202ENST00000409333 GDF6Q6KF10 455 aaPredicted RBP18.5■□□□□ 0.55
SSB-202ENST00000409333 CSGALNACT2Q8N6G5 542 aa18.5■□□□□ 0.55
SSB-202ENST00000409333 ACCSQ96QU6 501 aa18.5■□□□□ 0.55
SSB-202ENST00000409333 MAP7D2Q96T17 732 aa18.5■□□□□ 0.55
SSB-202ENST00000409333 SRRTQ9BXP5 876 aaKnown RBP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms