RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 TCP11Q8WWU5 503 aa15.59■□□□□ 0.09
CHRNA1-204ENST00000409323 KIFAP3Q92845 792 aa15.59■□□□□ 0.09
CHRNA1-204ENST00000409323 SMARCE1Q969G3 411 aa15.59■□□□□ 0.09
CHRNA1-204ENST00000409323 JPH2Q9BR39 696 aaPredicted RBP15.59■□□□□ 0.09
CHRNA1-204ENST00000409323 LRRC27Q9C0I9 530 aa15.59■□□□□ 0.09
CHRNA1-204ENST00000409323 PARVGQ9HBI0 331 aa15.59■□□□□ 0.09
CHRNA1-204ENST00000409323 SLC39A2Q9NP94 309 aa15.59■□□□□ 0.09
CHRNA1-204ENST00000409323 ODF2LQ9ULJ1 636 aa15.59■□□□□ 0.09
CHRNA1-204ENST00000409323 GDAQ9Y2T3 454 aa15.59■□□□□ 0.09
CHRNA1-204ENST00000409323 CDY2AQ9Y6F7 541 aa15.59■□□□□ 0.09
CHRNA1-204ENST00000409323 MROH7Q68CQ1 1323 aa15.59■□□□□ 0.09
CHRNA1-204ENST00000409323 CHRNA1P02708 482 aa15.58■□□□□ 0.09
CHRNA1-204ENST00000409323 CKBP12277 381 aa15.58■□□□□ 0.09
CHRNA1-204ENST00000409323 PLS3P13797 630 aa15.58■□□□□ 0.09
CHRNA1-204ENST00000409323 GPC3P51654 580 aa15.58■□□□□ 0.09
CHRNA1-204ENST00000409323 DMP1Q13316 513 aaPredicted RBP15.58■□□□□ 0.09
CHRNA1-204ENST00000409323 ZC2HC1CQ53FD0 456 aaPredicted RBP15.58■□□□□ 0.09
CHRNA1-204ENST00000409323 CCDC65Q8IXS2 484 aa15.58■□□□□ 0.09
CHRNA1-204ENST00000409323 TMEM40Q8WWA1 233 aa15.58■□□□□ 0.09
CHRNA1-204ENST00000409323 CCDC34Q96HJ3 373 aa15.58■□□□□ 0.09
CHRNA1-204ENST00000409323 EXOC1Q9NV70 894 aa15.58■□□□□ 0.09
CHRNA1-204ENST00000409323 HOOK1Q9UJC3 728 aaKnown RBP15.58■□□□□ 0.09
CHRNA1-204ENST00000409323 MAN1B1Q9UKM7 699 aa15.58■□□□□ 0.09
CHRNA1-204ENST00000409323 MAPK8IP1Q9UQF2 711 aa15.58■□□□□ 0.09
CHRNA1-204ENST00000409323 SCN5AQ14524 2016 aa15.58■□□□□ 0.08
CHRNA1-204ENST00000409323 K7ENM7 598 aa15.58■□□□□ 0.08
CHRNA1-204ENST00000409323 GAS2O43903 313 aaKnown RBP15.58■□□□□ 0.08
CHRNA1-204ENST00000409323 GPR32O75388 356 aa15.58■□□□□ 0.08
CHRNA1-204ENST00000409323 MYBP10242 640 aa15.58■□□□□ 0.08
CHRNA1-204ENST00000409323 CYP2C18P33260 490 aa15.58■□□□□ 0.08
CHRNA1-204ENST00000409323 ZNF131P52739 623 aa15.58■□□□□ 0.08
CHRNA1-204ENST00000409323 CCL23P55773 120 aa15.58■□□□□ 0.08
CHRNA1-204ENST00000409323 MRPS6P82932 125 aaKnown RBP15.58■□□□□ 0.08
CHRNA1-204ENST00000409323 SKOR2Q2VWA4 1001 aaPredicted RBP15.58■□□□□ 0.08
CHRNA1-204ENST00000409323 FAM178BQ8IXR5 827 aa15.58■□□□□ 0.08
CHRNA1-204ENST00000409323 EXOC8Q8IYI6 725 aa15.58■□□□□ 0.08
CHRNA1-204ENST00000409323 C7orf61Q8IZ16 206 aa15.58■□□□□ 0.08
CHRNA1-204ENST00000409323 SCLYQ96I15 445 aa15.58■□□□□ 0.08
CHRNA1-204ENST00000409323 IFT74Q96LB3 600 aa15.58■□□□□ 0.08
CHRNA1-204ENST00000409323 FIZ1Q96SL8 496 aa15.58■□□□□ 0.08
CHRNA1-204ENST00000409323 IKZF4Q9H2S9 585 aa15.58■□□□□ 0.08
CHRNA1-204ENST00000409323 MINDY3Q9H8M7 445 aa15.58■□□□□ 0.08
CHRNA1-204ENST00000409323 MRPL44Q9H9J2 332 aaKnown RBP15.58■□□□□ 0.08
CHRNA1-204ENST00000409323 KMT5AQ9NQR1 393 aa15.58■□□□□ 0.08
CHRNA1-204ENST00000409323 TMEM39AQ9NV64 488 aa15.58■□□□□ 0.08
CHRNA1-204ENST00000409323 FRMD3A2A2Y4 597 aa15.57■□□□□ 0.08
CHRNA1-204ENST00000409323 GCNT3O95395 438 aa15.57■□□□□ 0.08
CHRNA1-204ENST00000409323 CLTBP09497 229 aa15.57■□□□□ 0.08
CHRNA1-204ENST00000409323 ITGB8P26012 769 aa15.57■□□□□ 0.08
CHRNA1-204ENST00000409323 STK4Q13043 487 aa15.57■□□□□ 0.08
CHRNA1-204ENST00000409323 MXD4Q14582 209 aaPredicted RBP15.57■□□□□ 0.08
CHRNA1-204ENST00000409323 C1orf53Q5VUE5 145 aa15.57■□□□□ 0.08
CHRNA1-204ENST00000409323 RSPH3Q86UC2 560 aa15.57■□□□□ 0.08
CHRNA1-204ENST00000409323 DEPTORQ8TB45 409 aa15.57■□□□□ 0.08
CHRNA1-204ENST00000409323 TIPINQ9BVW5 301 aa15.57■□□□□ 0.08
CHRNA1-204ENST00000409323 ADAMTS10Q9H324 1103 aa15.57■□□□□ 0.08
CHRNA1-204ENST00000409323 HIPK3Q9H422 1215 aa15.57■□□□□ 0.08
CHRNA1-204ENST00000409323 IFT122Q9HBG6 1241 aa15.57■□□□□ 0.08
CHRNA1-204ENST00000409323 KIAA1468Q9P260 1216 aa15.57■□□□□ 0.08
CHRNA1-204ENST00000409323 LARSQ9P2J5 1176 aaKnown RBP15.57■□□□□ 0.08
CHRNA1-204ENST00000409323 TRIM43BA6NCK2 446 aa15.56■□□□□ 0.08
CHRNA1-204ENST00000409323 SMC2O95347 1197 aa15.56■□□□□ 0.08
CHRNA1-204ENST00000409323 SYN1P17600 705 aa15.56■□□□□ 0.08
CHRNA1-204ENST00000409323 KCNA1Q09470 495 aa15.56■□□□□ 0.08
CHRNA1-204ENST00000409323 FAM26FQ5R3K3 315 aa15.56■□□□□ 0.08
CHRNA1-204ENST00000409323 CNNM4Q6P4Q7 775 aa15.56■□□□□ 0.08
CHRNA1-204ENST00000409323 KIAA0895Q8NCT3 520 aa15.56■□□□□ 0.08
CHRNA1-204ENST00000409323 TRIM43Q96BQ3 446 aaPredicted RBP15.56■□□□□ 0.08
CHRNA1-204ENST00000409323 TOX2Q96NM4 488 aa15.56■□□□□ 0.08
CHRNA1-204ENST00000409323 NOC4LQ9BVI4 516 aaKnown RBP15.56■□□□□ 0.08
CHRNA1-204ENST00000409323 CELF4Q9BZC1 486 aaKnown RBP15.56■□□□□ 0.08
CHRNA1-204ENST00000409323 TRPV2Q9Y5S1 764 aa15.56■□□□□ 0.08
CHRNA1-204ENST00000409323 PVALEFA0A1B0GWK0 134 aa15.55■□□□□ 0.08
CHRNA1-204ENST00000409323 SYCE3A1L190 88 aa15.55■□□□□ 0.08
CHRNA1-204ENST00000409323 INO80B-WBP1J3KQ70 363 aa15.55■□□□□ 0.08
CHRNA1-204ENST00000409323 M0QZ92 97 aa15.55■□□□□ 0.08
CHRNA1-204ENST00000409323 PRPF6O94906 941 aaKnown RBP15.55■□□□□ 0.08
CHRNA1-204ENST00000409323 EDN1P05305 212 aa15.55■□□□□ 0.08
CHRNA1-204ENST00000409323 MYL1P05976 194 aa15.55■□□□□ 0.08
CHRNA1-204ENST00000409323 IQCF3P0C7M6 154 aa15.55■□□□□ 0.08
CHRNA1-204ENST00000409323 GHRP10912 638 aa15.55■□□□□ 0.08
CHRNA1-204ENST00000409323 GAP43P17677 238 aa15.55■□□□□ 0.08
CHRNA1-204ENST00000409323 BMP6P22004 513 aa15.55■□□□□ 0.08
CHRNA1-204ENST00000409323 NAMPTP43490 491 aa15.55■□□□□ 0.08
CHRNA1-204ENST00000409323 SARSP49591 514 aaKnown RBP15.55■□□□□ 0.08
CHRNA1-204ENST00000409323 EHHADHQ08426 723 aa15.55■□□□□ 0.08
CHRNA1-204ENST00000409323 MGAT3Q09327 533 aa15.55■□□□□ 0.08
CHRNA1-204ENST00000409323 TFDP1Q14186 410 aa15.55■□□□□ 0.08
CHRNA1-204ENST00000409323 MBTPS1Q14703 1052 aa15.55■□□□□ 0.08
CHRNA1-204ENST00000409323 TRAF7Q6Q0C0 670 aa15.55■□□□□ 0.08
CHRNA1-204ENST00000409323 NELFCDQ8IXH7 590 aa15.55■□□□□ 0.08
CHRNA1-204ENST00000409323 SPATA20Q8TB22 786 aa15.55■□□□□ 0.08
CHRNA1-204ENST00000409323 INO80BQ9C086 356 aaPredicted RBP15.55■□□□□ 0.08
CHRNA1-204ENST00000409323 WNT8AQ9H1J5 351 aa15.55■□□□□ 0.08
CHRNA1-204ENST00000409323 TBX21Q9UL17 535 aa15.55■□□□□ 0.08
CHRNA1-204ENST00000409323 DENND3A2RUS2 1198 aa15.54■□□□□ 0.08
CHRNA1-204ENST00000409323 TTLL13PA6NNM8 815 aa15.54■□□□□ 0.08
CHRNA1-204ENST00000409323 RHOBTB3O94955 611 aa15.54■□□□□ 0.08
CHRNA1-204ENST00000409323 CAPN2P17655 700 aa15.54■□□□□ 0.08
CHRNA1-204ENST00000409323 PPP2R5AQ15172 486 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms