RNA–Protein interactions for RNA: ENST00000409229.7

SLC3A1-202, Transcript of solute carrier family 3 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC3A1, Length 2,909 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-202ENST00000409229 HOXD11P31277 338 aaPredicted RBP12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 POLR2FP61218 127 aaKnown RBP12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 TCIRG1Q13488 830 aa12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 MPP2Q14168 576 aa12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 RTN1Q16799 776 aa12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 SMUG1Q53HV7 270 aa12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 EAPPQ56P03 285 aaPredicted RBP12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 HGSNATQ68CP4 663 aa12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 PDXDC1Q6P996 788 aa12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 CCDC174Q6PII3 467 aa12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 SCYL3Q8IZE3 742 aa12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 PRPF31Q8WWY3 499 aaKnown RBP12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 RSPH1Q8WYR4 309 aa12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 BAP1Q92560 729 aa12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 P2RX5Q93086 422 aa12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 ZKSCAN3Q9BRR0 538 aa12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 TMED5Q9Y3A6 229 aa12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 RTCBQ9Y3I0 505 aaKnown RBP12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 GPAA1O43292 621 aa12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 PRDM1O75626 825 aa12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 PGM3O95394 542 aa12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 GRIA2P42262 883 aa12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 RFX5P48382 616 aaPredicted RBP12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 VPS41P49754 854 aa12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 ARFIP2P53365 341 aa12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 DCTN2Q13561 401 aaKnown RBP12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 TNIP1Q15025 636 aa12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 DAB2IPQ5VWQ8 1189 aa12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 VSTM1Q6UX27 236 aa12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 DZIP1Q86YF9 867 aaKnown RBP12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 CLIP3Q96DZ5 547 aa12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 SMC6Q96SB8 1091 aa12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 MIPEPQ99797 713 aa12.49□□□□□ -0.41
SLC3A1-202ENST00000409229 BTBD11A6QL63 1104 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 SPTLC1O15269 473 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 DEXIO95424 95 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 DDX58O95786 925 aaKnown RBP12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 IDO1P14902 403 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 BRAFP15056 766 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 RXRBP28702 533 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 PTPN4P29074 926 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 MCM7P33993 719 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 TXKP42681 527 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 DR1Q01658 176 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 PKN1Q16512 942 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 USH1GQ495M9 461 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 TAF1BQ53T94 588 aaPredicted RBP12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 TTC38Q5R3I4 469 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 KLHL35Q6PF15 583 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 LRRC43Q8N309 656 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 TRIM11Q96F44 468 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 MYD88Q99836 296 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 ZDHHC18Q9NUE0 388 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 STK32BQ9NY57 414 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 TSC22D4Q9Y3Q8 395 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 WDR19Q8NEZ3 1342 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 SSU72P8A0A1W2PR75 194 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 EIF3FO00303 357 aaPredicted RBP12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 DDX3XO00571 662 aaKnown RBP eCLIP12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 ATP9BO43861 1147 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 FGGP02679 453 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 GSTT2P0CG29 244 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 GSTT2BP0CG30 244 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 HARSP12081 509 aaKnown RBP12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 PORP16435 677 aaPredicted RBP12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 SMARCA1P28370 1054 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 KCTD21Q4G0X4 260 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 SLC2A7Q6PXP3 512 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 PEX26Q7Z412 305 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 ZSCAN29Q8IWY8 852 aaPredicted RBP12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 MCUR1Q96AQ8 359 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 CDK5RAP3Q96JB5 506 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 CYTH2Q99418 400 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 CADM1Q9BY67 442 aaKnown RBP12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 UBA5Q9GZZ9 404 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 IL1RAPL1Q9NZN1 696 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 UTYO14607 1347 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 RPTORQ8N122 1335 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 IGSF1Q8N6C5 1336 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 BAG2O95816 211 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 XBP1P17861 261 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 DSG1Q02413 1049 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 KLRC3Q07444 240 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 THOC5Q13769 683 aaKnown RBP12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 SEC14L1Q92503 715 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 TMEM87BQ96K49 555 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 FNBP1Q96RU3 617 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 CCDC28BQ9BUN5 200 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 SYNCQ9H7C4 482 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 TCP11L1Q9NUJ3 509 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 DNAJC17Q9NVM6 304 aaKnown RBP12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 PTTG2Q9NZH5 202 aa12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 STX18Q9P2W9 335 aaKnown RBP12.48□□□□□ -0.41
SLC3A1-202ENST00000409229 RGL2O15211 777 aa12.47□□□□□ -0.41
SLC3A1-202ENST00000409229 CCNE1P24864 410 aa12.47□□□□□ -0.41
SLC3A1-202ENST00000409229 RGS2P41220 211 aa12.47□□□□□ -0.41
SLC3A1-202ENST00000409229 GEMIN4P57678 1058 aaKnown RBP12.47□□□□□ -0.41
SLC3A1-202ENST00000409229 DNAJC3Q13217 504 aa12.47□□□□□ -0.41
SLC3A1-202ENST00000409229 ACVR2BQ13705 512 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms