RNA–Protein interactions for RNA: ENST00000407249.7

CDK11B-204, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-204ENST00000407249 KLC4Q9NSK0 619 aa17.71■□□□□ 0.43
CDK11B-204ENST00000407249 TRAPPC3O43617 180 aa17.7■□□□□ 0.42
CDK11B-204ENST00000407249 C10orf76Q5T2E6 689 aa17.7■□□□□ 0.42
CDK11B-204ENST00000407249 SLC30A9Q6PML9 568 aa17.7■□□□□ 0.42
CDK11B-204ENST00000407249 GOLPH3Q9H4A6 298 aa17.7■□□□□ 0.42
CDK11B-204ENST00000407249 ATP6V0A4Q9HBG4 840 aa17.7■□□□□ 0.42
CDK11B-204ENST00000407249 TBC1D7Q9P0N9 293 aa17.7■□□□□ 0.42
CDK11B-204ENST00000407249 FAM198AQ9UFP1 575 aa17.7■□□□□ 0.42
CDK11B-204ENST00000407249 PCDHA2Q9Y5H9 948 aa17.7■□□□□ 0.42
CDK11B-204ENST00000407249 MYH4Q9Y623 1939 aa17.7■□□□□ 0.42
CDK11B-204ENST00000407249 CEP104O60308 925 aa17.7■□□□□ 0.42
CDK11B-204ENST00000407249 ZBTB48P10074 688 aaPredicted RBP17.7■□□□□ 0.42
CDK11B-204ENST00000407249 AOC3Q16853 763 aa17.7■□□□□ 0.42
CDK11B-204ENST00000407249 TATDN1Q6P1N9 297 aa17.7■□□□□ 0.42
CDK11B-204ENST00000407249 RUFY4Q6ZNE9 571 aa17.7■□□□□ 0.42
CDK11B-204ENST00000407249 NELFCDQ8IXH7 590 aa17.7■□□□□ 0.42
CDK11B-204ENST00000407249 RTKN2Q8IZC4 609 aa17.7■□□□□ 0.42
CDK11B-204ENST00000407249 FAM81BQ96LP2 452 aa17.7■□□□□ 0.42
CDK11B-204ENST00000407249 TRAIPQ9BWF2 469 aa17.7■□□□□ 0.42
CDK11B-204ENST00000407249 VPS33BQ9H267 617 aa17.7■□□□□ 0.42
CDK11B-204ENST00000407249 NEUROG2Q9H2A3 272 aa17.7■□□□□ 0.42
CDK11B-204ENST00000407249 KCNQ5Q9NR82 932 aa17.7■□□□□ 0.42
CDK11B-204ENST00000407249 DDX20Q9UHI6 824 aaKnown RBP17.7■□□□□ 0.42
CDK11B-204ENST00000407249 CERKLQ49MI3 558 aaPredicted RBP17.69■□□□□ 0.42
CDK11B-204ENST00000407249 IRF2BP2Q7Z5L9 587 aa17.69■□□□□ 0.42
CDK11B-204ENST00000407249 COA7Q96BR5 231 aa17.69■□□□□ 0.42
CDK11B-204ENST00000407249 AP1M1Q9BXS5 423 aa17.69■□□□□ 0.42
CDK11B-204ENST00000407249 NACA2Q9H009 215 aa17.69■□□□□ 0.42
CDK11B-204ENST00000407249 E2F6O75461 281 aa17.69■□□□□ 0.42
CDK11B-204ENST00000407249 EIF4BP23588 611 aaKnown RBP17.69■□□□□ 0.42
CDK11B-204ENST00000407249 SESN3P58005 492 aa17.69■□□□□ 0.42
CDK11B-204ENST00000407249 EN1Q05925 392 aaPredicted RBP17.69■□□□□ 0.42
CDK11B-204ENST00000407249 TMEM179Q6ZVK1 233 aa17.69■□□□□ 0.42
CDK11B-204ENST00000407249 ZNF571Q7Z3V5 609 aaPredicted RBP17.69■□□□□ 0.42
CDK11B-204ENST00000407249 NAP1L4Q99733 375 aaKnown RBP17.69■□□□□ 0.42
CDK11B-204ENST00000407249 KCTD10Q9H3F6 313 aa17.69■□□□□ 0.42
CDK11B-204ENST00000407249 JMJD4Q9H9V9 463 aa17.69■□□□□ 0.42
CDK11B-204ENST00000407249 GPCPD1Q9NPB8 672 aa17.69■□□□□ 0.42
CDK11B-204ENST00000407249 BMP2KQ9NSY1 1161 aaPredicted RBP17.69■□□□□ 0.42
CDK11B-204ENST00000407249 PGRMC1O00264 195 aaKnown RBP17.68■□□□□ 0.42
CDK11B-204ENST00000407249 PPIP5K2O43314 1243 aa17.68■□□□□ 0.42
CDK11B-204ENST00000407249 PSMC1P62191 440 aaKnown RBP17.68■□□□□ 0.42
CDK11B-204ENST00000407249 CCDC121Q6ZUS5 278 aa17.68■□□□□ 0.42
CDK11B-204ENST00000407249 PARP9Q8IXQ6 854 aa17.68■□□□□ 0.42
CDK11B-204ENST00000407249 ADGRF4Q8IZF3 695 aa17.68■□□□□ 0.42
CDK11B-204ENST00000407249 KIRREL3Q8IZU9 778 aa17.68■□□□□ 0.42
CDK11B-204ENST00000407249 SCFD1Q8WVM8 642 aa17.68■□□□□ 0.42
CDK11B-204ENST00000407249 HAS1Q92839 578 aa17.68■□□□□ 0.42
CDK11B-204ENST00000407249 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.68■□□□□ 0.426e-7■□□□□ 9.7
CDK11B-204ENST00000407249 TRIM4Q9C037 500 aa17.68■□□□□ 0.42
CDK11B-204ENST00000407249 DNAJC18Q9H819 358 aa17.68■□□□□ 0.42
CDK11B-204ENST00000407249 EP400Q96L91 3159 aa17.68■□□□□ 0.42
CDK11B-204ENST00000407249 EZRP15311 586 aaKnown RBP17.68■□□□□ 0.42
CDK11B-204ENST00000407249 TMOD1P28289 359 aa17.68■□□□□ 0.42
CDK11B-204ENST00000407249 EPS15P42566 896 aa17.68■□□□□ 0.42
CDK11B-204ENST00000407249 KCNH2Q12809 1159 aa17.68■□□□□ 0.42
CDK11B-204ENST00000407249 ADAM9Q13443 819 aa17.68■□□□□ 0.42
CDK11B-204ENST00000407249 IFI16Q16666 785 aaKnown RBP17.68■□□□□ 0.42
CDK11B-204ENST00000407249 LRRC23Q53EV4 343 aaPredicted RBP17.68■□□□□ 0.42
CDK11B-204ENST00000407249 ZC3H3Q8IXZ2 948 aaKnown RBP17.68■□□□□ 0.42
CDK11B-204ENST00000407249 METTL13Q8N6R0 699 aa17.68■□□□□ 0.42
CDK11B-204ENST00000407249 KCNN1Q92952 543 aa17.68■□□□□ 0.42
CDK11B-204ENST00000407249 OSBPL7Q9BZF2 842 aa17.68■□□□□ 0.42
CDK11B-204ENST00000407249 DDX47Q9H0S4 455 aaKnown RBP17.68■□□□□ 0.42
CDK11B-204ENST00000407249 ACTR5Q9H9F9 607 aaPredicted RBP17.68■□□□□ 0.42
CDK11B-204ENST00000407249 SLC40A1Q9NP59 571 aa17.68■□□□□ 0.42
CDK11B-204ENST00000407249 FBXL5Q9UKA1 691 aa17.68■□□□□ 0.42
CDK11B-204ENST00000407249 ZBTB5O15062 677 aa17.67■□□□□ 0.42
CDK11B-204ENST00000407249 FLT3P36888 993 aa17.67■□□□□ 0.42
CDK11B-204ENST00000407249 GCLCP48506 637 aaPredicted RBP17.67■□□□□ 0.42
CDK11B-204ENST00000407249 EIF6P56537 245 aaKnown RBP17.67■□□□□ 0.42
CDK11B-204ENST00000407249 QPCTQ16769 361 aa17.67■□□□□ 0.42
CDK11B-204ENST00000407249 DPY19L2P1Q6NXN4 242 aa17.67■□□□□ 0.42
CDK11B-204ENST00000407249 RBM41Q96IZ5 413 aaKnown RBP17.67■□□□□ 0.42
CDK11B-204ENST00000407249 DNAAF2Q9NVR5 837 aaKnown RBP17.67■□□□□ 0.42
CDK11B-204ENST00000407249 NAGPAQ9UK23 515 aa17.67■□□□□ 0.42
CDK11B-204ENST00000407249 NOC2LQ9Y3T9 749 aaKnown RBP17.67■□□□□ 0.42
CDK11B-204ENST00000407249 SSBP05455 408 aaKnown RBP eCLIP17.67■□□□□ 0.42
CDK11B-204ENST00000407249 PAEPP09466 180 aa17.67■□□□□ 0.42
CDK11B-204ENST00000407249 TNNI2P48788 182 aa17.67■□□□□ 0.42
CDK11B-204ENST00000407249 PPP2R2AP63151 447 aa17.67■□□□□ 0.42
CDK11B-204ENST00000407249 PPARDQ03181 441 aa17.67■□□□□ 0.42
CDK11B-204ENST00000407249 MTMR3Q13615 1198 aa17.67■□□□□ 0.42
CDK11B-204ENST00000407249 AGBL2Q5U5Z8 902 aa17.67■□□□□ 0.42
CDK11B-204ENST00000407249 TMEM110Q86TL2 294 aa17.67■□□□□ 0.42
CDK11B-204ENST00000407249 ZFPM1Q8IX07 1006 aa17.67■□□□□ 0.42
CDK11B-204ENST00000407249 KCTD17Q8N5Z5 321 aa17.67■□□□□ 0.42
CDK11B-204ENST00000407249 TTLL6Q8N841 843 aa17.67■□□□□ 0.42
CDK11B-204ENST00000407249 SLC16A10Q8TF71 515 aa17.67■□□□□ 0.42
CDK11B-204ENST00000407249 GJA10Q969M2 543 aa17.67■□□□□ 0.42
CDK11B-204ENST00000407249 ZNF219Q9P2Y4 722 aaPredicted RBP17.67■□□□□ 0.42
CDK11B-204ENST00000407249 CNOT8Q9UFF9 292 aaKnown RBP17.67■□□□□ 0.42
CDK11B-204ENST00000407249 BZW2Q9Y6E2 419 aaKnown RBP17.67■□□□□ 0.42
CDK11B-204ENST00000407249 DDTLA6NHG4 134 aaPredicted RBP17.66■□□□□ 0.42
CDK11B-204ENST00000407249 CCDC188H7C350 402 aa17.66■□□□□ 0.42
CDK11B-204ENST00000407249 ACTN1P12814 892 aa17.66■□□□□ 0.42
CDK11B-204ENST00000407249 ROR2Q01974 943 aaKnown RBP17.66■□□□□ 0.42
CDK11B-204ENST00000407249 ODF2Q5BJF6 829 aa17.66■□□□□ 0.42
CDK11B-204ENST00000407249 HYIQ5T013 277 aa17.66■□□□□ 0.42
CDK11B-204ENST00000407249 CAPRIN2Q6IMN6 1127 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms