RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 RHBDL3P58872 404 aa6.48□□□□□ -1.37
HMGB1P13-201ENST00000406019 FAPQ12884 760 aa6.48□□□□□ -1.37
HMGB1P13-201ENST00000406019 DUSP8Q13202 625 aa6.48□□□□□ -1.37
HMGB1P13-201ENST00000406019 NFYCQ13952 458 aa6.48□□□□□ -1.37
HMGB1P13-201ENST00000406019 MYBPC3Q14896 1274 aa6.48□□□□□ -1.37
HMGB1P13-201ENST00000406019 RNF151Q2KHN1 245 aa6.48□□□□□ -1.37
HMGB1P13-201ENST00000406019 ATP13A4Q4VNC1 1196 aa6.48□□□□□ -1.37
HMGB1P13-201ENST00000406019 SLFN13Q68D06 897 aa6.48□□□□□ -1.37
HMGB1P13-201ENST00000406019 TTC9BQ8N6N2 239 aa6.48□□□□□ -1.37
HMGB1P13-201ENST00000406019 SAMD11Q96NU1 681 aa6.48□□□□□ -1.37
HMGB1P13-201ENST00000406019 SLC13A1Q9BZW2 595 aa6.48□□□□□ -1.37
HMGB1P13-201ENST00000406019 KIAA1683Q9H0B3 1180 aa6.48□□□□□ -1.37
HMGB1P13-201ENST00000406019 TCF7L1Q9HCS4 588 aa6.48□□□□□ -1.37
HMGB1P13-201ENST00000406019 CD248Q9HCU0 757 aa6.48□□□□□ -1.37
HMGB1P13-201ENST00000406019 SPTLC3Q9NUV7 552 aa6.48□□□□□ -1.37
HMGB1P13-201ENST00000406019 ZKSCAN5Q9Y2L8 839 aa6.48□□□□□ -1.37
HMGB1P13-201ENST00000406019 A0A0G2JNJ9 132 aa6.47□□□□□ -1.37
HMGB1P13-201ENST00000406019 ULK1O75385 1050 aa6.47□□□□□ -1.37
HMGB1P13-201ENST00000406019 ATF3P18847 181 aa6.47□□□□□ -1.37
HMGB1P13-201ENST00000406019 APEX1P27695 318 aaKnown RBP6.47□□□□□ -1.37
HMGB1P13-201ENST00000406019 SMAD3P84022 425 aaKnown RBP6.47□□□□□ -1.37
HMGB1P13-201ENST00000406019 OCRLQ01968 901 aa6.47□□□□□ -1.37
HMGB1P13-201ENST00000406019 UBE4AQ14139 1066 aa6.47□□□□□ -1.37
HMGB1P13-201ENST00000406019 IQSEC1Q6DN90 963 aa6.47□□□□□ -1.37
HMGB1P13-201ENST00000406019 GRAMD4Q6IC98 578 aa6.47□□□□□ -1.37
HMGB1P13-201ENST00000406019 ARHGEF18Q6ZSZ5 1173 aa6.47□□□□□ -1.37
HMGB1P13-201ENST00000406019 KANSL1Q7Z3B3 1105 aa6.47□□□□□ -1.37
HMGB1P13-201ENST00000406019 EFHBQ8N7U6 833 aa6.47□□□□□ -1.37
HMGB1P13-201ENST00000406019 CHTF18Q8WVB6 975 aa6.47□□□□□ -1.37
HMGB1P13-201ENST00000406019 ERCC4Q92889 916 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P13-201ENST00000406019 SLC39A13Q96H72 371 aa6.47□□□□□ -1.37
HMGB1P13-201ENST00000406019 MAML3Q96JK9 1138 aa6.47□□□□□ -1.37
HMGB1P13-201ENST00000406019 WWC2-AS2Q96NR7 200 aa6.47□□□□□ -1.37
HMGB1P13-201ENST00000406019 GPR101Q96P66 508 aaPredicted RBP6.47□□□□□ -1.37
HMGB1P13-201ENST00000406019 MYH16Q9H6N6 1097 aa6.47□□□□□ -1.37
HMGB1P13-201ENST00000406019 VTA1Q9NP79 307 aa6.47□□□□□ -1.37
HMGB1P13-201ENST00000406019 THG1LQ9NWX6 298 aaKnown RBP6.47□□□□□ -1.37
HMGB1P13-201ENST00000406019 Q9UFV3 132 aa6.47□□□□□ -1.37
HMGB1P13-201ENST00000406019 ZNF180Q9UJW8 692 aa6.47□□□□□ -1.37
HMGB1P13-201ENST00000406019 PATE3B3GLJ2 98 aa6.46□□□□□ -1.38
HMGB1P13-201ENST00000406019 PRPF3O43395 683 aaKnown RBP6.46□□□□□ -1.38
HMGB1P13-201ENST00000406019 HMGCRP04035 888 aa6.46□□□□□ -1.38
HMGB1P13-201ENST00000406019 KCNQ1P51787 676 aa6.46□□□□□ -1.38
HMGB1P13-201ENST00000406019 SLC6A3Q01959 620 aa6.46□□□□□ -1.38
HMGB1P13-201ENST00000406019 HGFACQ04756 655 aa6.46□□□□□ -1.38
HMGB1P13-201ENST00000406019 ICAM4Q14773 271 aa6.46□□□□□ -1.38
HMGB1P13-201ENST00000406019 PCOLCEQ15113 449 aa6.46□□□□□ -1.38
HMGB1P13-201ENST00000406019 LCE5AQ5TCM9 118 aa6.46□□□□□ -1.38
HMGB1P13-201ENST00000406019 AGBL4Q5VU57 503 aa6.46□□□□□ -1.38
HMGB1P13-201ENST00000406019 MAGEB6Q8N7X4 407 aa6.46□□□□□ -1.38
HMGB1P13-201ENST00000406019 CALML6Q8TD86 181 aa6.46□□□□□ -1.38
HMGB1P13-201ENST00000406019 SCYL1Q96KG9 808 aa6.46□□□□□ -1.38
HMGB1P13-201ENST00000406019 PCIF1Q9H4Z3 704 aa6.46□□□□□ -1.38
HMGB1P13-201ENST00000406019 ARNT2Q9HBZ2 717 aa6.46□□□□□ -1.38
HMGB1P13-201ENST00000406019 CDC42EP3Q9UKI2 254 aa6.46□□□□□ -1.38
HMGB1P13-201ENST00000406019 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P13-201ENST00000406019 UBA6A0AVT1 1052 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P13-201ENST00000406019 ZSCAN20P17040 1043 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P13-201ENST00000406019 MAGEA10P43363 369 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P13-201ENST00000406019 KPNA1P52294 538 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P13-201ENST00000406019 ANTXR2P58335 489 aa6.45□□□□□ -1.38
HMGB1P13-201ENST00000406019 KRT85P78386 507 aa6.45□□□□□ -1.38
HMGB1P13-201ENST00000406019 KLF1Q13351 362 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P13-201ENST00000406019 MLC1Q15049 377 aa6.45□□□□□ -1.38
HMGB1P13-201ENST00000406019 ABCB5Q2M3G0 1257 aa6.45□□□□□ -1.38
HMGB1P13-201ENST00000406019 SPATS1Q496A3 300 aa6.45□□□□□ -1.38
HMGB1P13-201ENST00000406019 ERICH6BQ5W0A0 696 aa6.45□□□□□ -1.38
HMGB1P13-201ENST00000406019 PRRT2Q7Z6L0 340 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P13-201ENST00000406019 EXOC8Q8IYI6 725 aa6.45□□□□□ -1.38
HMGB1P13-201ENST00000406019 IFNL2Q8IZJ0 200 aa6.45□□□□□ -1.38
HMGB1P13-201ENST00000406019 CLRN3Q8NCR9 226 aa6.45□□□□□ -1.38
HMGB1P13-201ENST00000406019 OR5AN1Q8NGI8 311 aa6.45□□□□□ -1.38
HMGB1P13-201ENST00000406019 MORC4Q8TE76 937 aa6.45□□□□□ -1.38
HMGB1P13-201ENST00000406019 JPH3Q8WXH2 748 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P13-201ENST00000406019 NKD2Q969F2 451 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P13-201ENST00000406019 NEIL1Q96FI4 390 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P13-201ENST00000406019 FUBP3Q96I24 572 aaKnown RBP eCLIP6.45□□□□□ -1.38
HMGB1P13-201ENST00000406019 C1QTNF3Q9BXJ4 246 aa6.45□□□□□ -1.38
HMGB1P13-201ENST00000406019 PITHD1Q9GZP4 211 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P13-201ENST00000406019 SEMA4AQ9H3S1 761 aa6.45□□□□□ -1.38
HMGB1P13-201ENST00000406019 IARSP41252 1262 aaKnown RBP6.44□□□□□ -1.38
HMGB1P13-201ENST00000406019 STAT5BP51692 787 aa6.44□□□□□ -1.38
HMGB1P13-201ENST00000406019 RRADP55042 308 aa6.44□□□□□ -1.38
HMGB1P13-201ENST00000406019 SESN3P58005 492 aa6.44□□□□□ -1.38
HMGB1P13-201ENST00000406019 ADAM17P78536 824 aa6.44□□□□□ -1.38
HMGB1P13-201ENST00000406019 ROM1Q03395 351 aa6.44□□□□□ -1.38
HMGB1P13-201ENST00000406019 LRRC32Q14392 662 aa6.44□□□□□ -1.38
HMGB1P13-201ENST00000406019 NOLC1Q14978 699 aaKnown RBP eCLIP6.44□□□□□ -1.38
HMGB1P13-201ENST00000406019 CDSNQ15517 529 aa6.44□□□□□ -1.38
HMGB1P13-201ENST00000406019 ZNF174Q15697 407 aa6.44□□□□□ -1.38
HMGB1P13-201ENST00000406019 PTPN21Q16825 1174 aa6.44□□□□□ -1.38
HMGB1P13-201ENST00000406019 TTC38Q5R3I4 469 aa6.44□□□□□ -1.38
HMGB1P13-201ENST00000406019 GORABQ5T7V8 394 aa6.44□□□□□ -1.38
HMGB1P13-201ENST00000406019 GPR158Q5T848 1215 aa6.44□□□□□ -1.38
HMGB1P13-201ENST00000406019 SLFN12LQ6IEE8 588 aa6.44□□□□□ -1.38
HMGB1P13-201ENST00000406019 CXorf57Q6NSI4 855 aaKnown RBP6.44□□□□□ -1.38
HMGB1P13-201ENST00000406019 OTOP2Q7RTS6 562 aa6.44□□□□□ -1.38
HMGB1P13-201ENST00000406019 C11orf74Q86VG3 221 aa6.44□□□□□ -1.38
HMGB1P13-201ENST00000406019 SMC5Q8IY18 1101 aa6.44□□□□□ -1.38
HMGB1P13-201ENST00000406019 E2F7Q96AV8 911 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms