RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 TUBE1Q9UJT0 475 aa14.25□□□□□ -0.13
SNED1-205ENST00000405547 PCDHA6Q9UN73 950 aa14.25□□□□□ -0.13
SNED1-205ENST00000405547 PCDHA8Q9Y5H6 950 aa14.25□□□□□ -0.13
SNED1-205ENST00000405547 USP32Q8NFA0 1604 aa14.25□□□□□ -0.13
SNED1-205ENST00000405547 SPDYE16A6NNV3 312 aaPredicted RBP14.25□□□□□ -0.13
SNED1-205ENST00000405547 GSG1L2A8MUP6 293 aa14.25□□□□□ -0.13
SNED1-205ENST00000405547 SRGNP10124 158 aa14.25□□□□□ -0.13
SNED1-205ENST00000405547 SMARCA1P28370 1054 aa14.25□□□□□ -0.13
SNED1-205ENST00000405547 HOXA13P31271 388 aaPredicted RBP14.25□□□□□ -0.13
SNED1-205ENST00000405547 SPDYE2Q495Y8 402 aa14.25□□□□□ -0.13
SNED1-205ENST00000405547 SYDE1Q6ZW31 735 aaPredicted RBP14.25□□□□□ -0.13
SNED1-205ENST00000405547 NCAPG2Q86XI2 1143 aa14.25□□□□□ -0.13
SNED1-205ENST00000405547 PNPLA7Q6ZV29 1317 aa14.25□□□□□ -0.13
SNED1-205ENST00000405547 LRIG3Q6UXM1 1119 aa14.25□□□□□ -0.13
SNED1-205ENST00000405547 CCNI2Q6ZMN8 369 aaPredicted RBP14.25□□□□□ -0.13
SNED1-205ENST00000405547 INPP1P49441 399 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 DYNC1I2Q13409 638 aaKnown RBP14.24□□□□□ -0.13
SNED1-205ENST00000405547 TFDP2Q14188 446 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 PIGBQ92521 554 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 RNPC3Q96LT9 517 aaKnown RBP14.24□□□□□ -0.13
SNED1-205ENST00000405547 DONSONQ9NYP3 566 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 HSPA4LO95757 839 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 PAMP19021 973 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 ARHGAP18Q8N392 663 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 SH3RF3Q8TEJ3 882 aaPredicted RBP14.24□□□□□ -0.13
SNED1-205ENST00000405547 MSTO1Q9BUK6 570 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 DCP1AQ9NPI6 582 aaPredicted RBP14.24□□□□□ -0.13
SNED1-205ENST00000405547 LSP1P33241 339 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 SOX5P35711 763 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 PRELPP51888 382 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 OCRLQ01968 901 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 CAPRIN2Q6IMN6 1127 aaKnown RBP14.24□□□□□ -0.13
SNED1-205ENST00000405547 STOX1Q6ZVD7 989 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 IRX2Q9BZI1 471 aaPredicted RBP14.24□□□□□ -0.13
SNED1-205ENST00000405547 UTYO14607 1347 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 ORC4O43929 436 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 ZSCAN20P17040 1043 aaPredicted RBP14.24□□□□□ -0.13
SNED1-205ENST00000405547 USP11P51784 963 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 ACTN3Q08043 901 aaPredicted RBP14.24□□□□□ -0.13
SNED1-205ENST00000405547 GPS1Q13098 491 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 PDIA5Q14554 519 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 ATP11CQ8NB49 1132 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 MCUQ8NE86 351 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 OLFM3Q96PB7 478 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 TRIM9Q9C026 710 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 AMACRQ9UHK6 382 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 HPCAL4Q9UM19 191 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 DLC1Q96QB1 1528 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 CFLARO15519 480 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 CASP2P42575 452 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 ARL13BQ3SXY8 428 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 SUSD4Q5VX71 490 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 ANKRD40Q6AI12 368 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 RSRC2Q7L4I2 434 aaKnown RBP14.24□□□□□ -0.13
SNED1-205ENST00000405547 TRIM59Q8IWR1 403 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 ABTB1Q969K4 478 aaPredicted RBP14.24□□□□□ -0.13
SNED1-205ENST00000405547 EEF1DP29692 281 aaKnown RBP14.24□□□□□ -0.13
SNED1-205ENST00000405547 DPYDQ12882 1025 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 PRKG1Q13976 671 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 ACAD11Q709F0 780 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 SESTD1Q86VW0 696 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 TC2NQ8N9U0 490 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 HSPH1Q92598 858 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 DPF2Q92785 391 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 ATP6V1E2Q96A05 226 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 SLC12A6Q9UHW9 1150 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 CCDC22O60826 627 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 HAUS5O94927 633 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 GCLMP48507 274 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 PDXDC1Q6P996 788 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 C7orf31Q8N865 590 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 CEP95Q96GE4 821 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 ANGPTL3Q9Y5C1 460 aa14.24□□□□□ -0.13
SNED1-205ENST00000405547 FOXN1O15353 648 aa14.23□□□□□ -0.13
SNED1-205ENST00000405547 GDF11O95390 407 aa14.23□□□□□ -0.13
SNED1-205ENST00000405547 RABL6Q3YEC7 729 aaPredicted RBP14.23□□□□□ -0.13
SNED1-205ENST00000405547 RHOT1Q8IXI2 618 aa14.23□□□□□ -0.13
SNED1-205ENST00000405547 VPS39Q96JC1 886 aa14.23□□□□□ -0.13
SNED1-205ENST00000405547 ARL2BPQ9Y2Y0 163 aa14.23□□□□□ -0.13
SNED1-205ENST00000405547 RASSF10A6NK89 507 aa14.23□□□□□ -0.13
SNED1-205ENST00000405547 USP17L5A8MUK1 530 aa14.23□□□□□ -0.13
SNED1-205ENST00000405547 LPXNO60711 386 aa14.23□□□□□ -0.13
SNED1-205ENST00000405547 AGTP01019 485 aa14.23□□□□□ -0.13
SNED1-205ENST00000405547 STAT4Q14765 748 aa14.23□□□□□ -0.13
SNED1-205ENST00000405547 MTERF2Q49AM1 385 aa14.23□□□□□ -0.13
SNED1-205ENST00000405547 ANO5Q75V66 913 aa14.23□□□□□ -0.13
SNED1-205ENST00000405547 HEXIM2Q96MH2 286 aaKnown RBP14.23□□□□□ -0.13
SNED1-205ENST00000405547 PLEKHG2Q9H7P9 1386 aa14.23□□□□□ -0.13
SNED1-205ENST00000405547 MYO10Q9HD67 2058 aa14.23□□□□□ -0.13
SNED1-205ENST00000405547 POTEB3A0JP26 581 aa14.23□□□□□ -0.13
SNED1-205ENST00000405547 KPNA7A9QM74 516 aa14.23□□□□□ -0.13
SNED1-205ENST00000405547 POTECB2RU33 542 aa14.23□□□□□ -0.13
SNED1-205ENST00000405547 PSMD14O00487 310 aa14.23□□□□□ -0.13
SNED1-205ENST00000405547 ABL1P00519 1130 aa14.23□□□□□ -0.13
SNED1-205ENST00000405547 IGBP1P78318 339 aa14.23□□□□□ -0.13
SNED1-205ENST00000405547 POTEBQ6S5H4 581 aa14.23□□□□□ -0.13
SNED1-205ENST00000405547 ARMCX2Q7L311 632 aa14.23□□□□□ -0.13
SNED1-205ENST00000405547 ICA1LQ8NDH6 482 aa14.23□□□□□ -0.13
SNED1-205ENST00000405547 ZWILCHQ9H900 591 aa14.23□□□□□ -0.13
SNED1-205ENST00000405547 INO80Q9ULG1 1556 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms