RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 NR3C1P04150 777 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 GLRA2P23416 452 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 EEF1GP26641 437 aaKnown RBP4.07□□□□□ -1.76
RTN4-208ENST00000404909 CPT1AP50416 773 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 CACNB2Q08289 660 aaPredicted RBP4.07□□□□□ -1.76
RTN4-208ENST00000404909 PPFIA1Q13136 1202 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 FSCN1Q16658 493 aaKnown RBP4.07□□□□□ -1.76
RTN4-208ENST00000404909 KIAA0753Q2KHM9 967 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 GNASQ5JWF2 1037 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 EFCAB12Q6NXP0 572 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 LRRC55Q6ZSA7 311 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.07□□□□□ -1.76
RTN4-208ENST00000404909 NLRP4Q96MN2 994 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 ACCSQ96QU6 501 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 PCIF1Q9H4Z3 704 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 SETD4Q9NVD3 440 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 SUCLA2Q9P2R7 463 aaPredicted RBP4.07□□□□□ -1.76
RTN4-208ENST00000404909 SRRDQ9UH36 339 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 LIMA1Q9UHB6 759 aaKnown RBP4.07□□□□□ -1.76
RTN4-208ENST00000404909 ZSWIM8A7E2V4 1837 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 MYH11P35749 1972 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 A6NJR5 290 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 HNRNPDLO14979 420 aaKnown RBP4.07□□□□□ -1.76
RTN4-208ENST00000404909 FKTNO75072 461 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 RARBP10826 455 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 CYBAP13498 195 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 RPL13P26373 211 aaKnown RBP4.07□□□□□ -1.76
RTN4-208ENST00000404909 KLRC1P26715 233 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 CCND3P30281 292 aaPredicted RBP4.07□□□□□ -1.76
RTN4-208ENST00000404909 CASP4P49662 377 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 DNM2P50570 870 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 NCKAP1LP55160 1127 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 GTF2BQ00403 316 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 ARID5BQ14865 1188 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 NR1I3Q14994 352 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 BMT2Q1RMZ1 405 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 EDRF1Q3B7T1 1238 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 TCERG1LQ5VWI1 586 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 PPP4R3CPQ6ZMV5 832 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 APTXQ7Z2E3 356 aaKnown RBP4.07□□□□□ -1.76
RTN4-208ENST00000404909 RNF149Q8NC42 400 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 RETREG2Q8NC44 543 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 CPLX3Q8WVH0 158 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 PSPC1Q8WXF1 523 aaKnown RBP4.07□□□□□ -1.76
RTN4-208ENST00000404909 PCMTD1Q96MG8 357 aaPredicted RBP4.07□□□□□ -1.76
RTN4-208ENST00000404909 SCLT1Q96NL6 688 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 CEP89Q96ST8 783 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 TMEM206Q9H813 350 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 C17orf75Q9HAS0 396 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 RTN4Q9NQC3 1192 aaKnown RBP4.07□□□□□ -1.76
RTN4-208ENST00000404909 AGPAT3Q9NRZ7 376 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 TBX20Q9UMR3 447 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 TRAF3IP3Q9Y228 551 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 AKT3Q9Y243 479 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 GINS2Q9Y248 185 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 WDR81Q562E7 1941 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 ZMYM2Q9UBW7 1377 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 MKI67P46013 3256 aaKnown RBP4.07□□□□□ -1.76
RTN4-208ENST00000404909 MYADML2A6NDP7 307 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 K7ERI5 159 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 EXOC3O60645 756 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 PPP1R37O75864 691 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 AKAP3O75969 853 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 MAPTP10636 758 aaKnown RBP4.07□□□□□ -1.76
RTN4-208ENST00000404909 CDC25BP30305 580 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 ARL2P36404 184 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 GOLGA8FQ08AF8 430 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 GOLGA8DPQ0D2H9 430 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 LAMTOR4Q0VGL1 99 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 STRN3Q13033 797 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 MKRN4PQ13434 485 aaPredicted RBP4.07□□□□□ -1.76
RTN4-208ENST00000404909 ALCAMQ13740 583 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 PPP2R5AQ15172 486 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 GRIK4Q16099 956 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 DCAF17Q5H9S7 520 aaPredicted RBP4.07□□□□□ -1.76
RTN4-208ENST00000404909 VSTM4Q8IW00 320 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 SLC17A8Q8NDX2 589 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 SPIRE2Q8WWL2 714 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 ERO1AQ96HE7 468 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 CEP63Q96MT8 703 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 JPH2Q9BR39 696 aaPredicted RBP4.07□□□□□ -1.76
RTN4-208ENST00000404909 CBWD1Q9BRT8 395 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 SPC25Q9HBM1 224 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 FRMD4BQ9Y2L6 1034 aa4.07□□□□□ -1.76
RTN4-208ENST00000404909 LRRC10BA6NIK2 292 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 SEPT4O43236 478 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 DUSP11O75319 330 aaKnown RBP4.06□□□□□ -1.76
RTN4-208ENST00000404909 CSDE1O75534 798 aaKnown RBP4.06□□□□□ -1.76
RTN4-208ENST00000404909 C22orf31O95567 290 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 VTNP04004 478 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 EPB41P11171 864 aaKnown RBP4.06□□□□□ -1.76
RTN4-208ENST00000404909 TMOD1P28289 359 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 MATR3P43243 847 aaKnown RBP eCLIP4.06□□□□□ -1.762e-7■■□□□ 13.8
RTN4-208ENST00000404909 NAMPTP43490 491 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 TMEM62Q0P6H9 643 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 CAPSQ13938 189 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 TMEM132AQ24JP5 1023 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 ZNF484Q5JVG2 852 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 FKBP15Q5T1M5 1219 aa4.06□□□□□ -1.76
RTN4-208ENST00000404909 IER5Q5VY09 327 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms