RNA–Protein interactions for RNA: ENST00000402105.7

HPS4-203, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best) BASIC

Gene HPS4, Length 3,562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-203ENST00000402105 SLITRK6Q9H5Y7 841 aa9.91□□□□□ -0.82
HPS4-203ENST00000402105 ABCB11O95342 1321 aa9.9□□□□□ -0.82
HPS4-203ENST00000402105 A0A1B0GUA9 196 aa9.9□□□□□ -0.82
HPS4-203ENST00000402105 ATP6V1G2O95670 118 aa9.9□□□□□ -0.82
HPS4-203ENST00000402105 POLD1P28340 1107 aa9.9□□□□□ -0.82
HPS4-203ENST00000402105 SOX5P35711 763 aa9.9□□□□□ -0.82
HPS4-203ENST00000402105 GCLMP48507 274 aa9.9□□□□□ -0.82
HPS4-203ENST00000402105 ELF3P78545 371 aaPredicted RBP9.9□□□□□ -0.82
HPS4-203ENST00000402105 EPHA7Q15375 998 aa9.9□□□□□ -0.82
HPS4-203ENST00000402105 CBWD6Q4V339 395 aa9.9□□□□□ -0.82
HPS4-203ENST00000402105 CBWD3Q5JTY5 395 aa9.9□□□□□ -0.82
HPS4-203ENST00000402105 CBWD5Q5RIA9 395 aa9.9□□□□□ -0.82
HPS4-203ENST00000402105 SEL1L2Q5TEA6 688 aa9.9□□□□□ -0.82
HPS4-203ENST00000402105 BARGINQ6ZT62 677 aa9.9□□□□□ -0.82
HPS4-203ENST00000402105 FAM178BQ8IXR5 827 aa9.9□□□□□ -0.82
HPS4-203ENST00000402105 DDX4Q9NQI0 724 aaKnown RBP9.9□□□□□ -0.82
HPS4-203ENST00000402105 SUCLA2Q9P2R7 463 aaPredicted RBP9.9□□□□□ -0.82
HPS4-203ENST00000402105 TMEM59LQ9UK28 342 aa9.9□□□□□ -0.82
HPS4-203ENST00000402105 CCNL1Q9UK58 526 aaPredicted RBP9.9□□□□□ -0.82
HPS4-203ENST00000402105 TIAM2Q8IVF5 1701 aa9.9□□□□□ -0.82
HPS4-203ENST00000402105 PSMC2P35998 433 aaKnown RBP9.9□□□□□ -0.82
HPS4-203ENST00000402105 RPL21P46778 160 aaKnown RBP9.9□□□□□ -0.82
HPS4-203ENST00000402105 PREPLQ4J6C6 727 aaPredicted RBP9.9□□□□□ -0.82
HPS4-203ENST00000402105 GRIPAP1Q4V328 841 aa9.9□□□□□ -0.82
HPS4-203ENST00000402105 EPC2Q52LR7 807 aa9.9□□□□□ -0.82
HPS4-203ENST00000402105 C10orf76Q5T2E6 689 aa9.9□□□□□ -0.82
HPS4-203ENST00000402105 AGBL2Q5U5Z8 902 aa9.9□□□□□ -0.82
HPS4-203ENST00000402105 DCAF12L1Q5VU92 463 aa9.9□□□□□ -0.82
HPS4-203ENST00000402105 SLFN13Q68D06 897 aa9.9□□□□□ -0.82
HPS4-203ENST00000402105 FRMD5Q7Z6J6 570 aa9.9□□□□□ -0.82
HPS4-203ENST00000402105 CCDC50Q8IVM0 306 aa9.9□□□□□ -0.82
HPS4-203ENST00000402105 PPM1KQ8N3J5 372 aa9.9□□□□□ -0.82
HPS4-203ENST00000402105 SLC17A8Q8NDX2 589 aa9.9□□□□□ -0.82
HPS4-203ENST00000402105 HEMGNQ9BXL5 484 aa9.9□□□□□ -0.82
HPS4-203ENST00000402105 FAM129AQ9BZQ8 928 aa9.9□□□□□ -0.82
HPS4-203ENST00000402105 LMNB1P20700 586 aa9.9□□□□□ -0.83
HPS4-203ENST00000402105 SLC12A3P55017 1021 aa9.9□□□□□ -0.83
HPS4-203ENST00000402105 MTM1Q13496 603 aa9.9□□□□□ -0.83
HPS4-203ENST00000402105 BYSLQ13895 437 aaKnown RBP9.9□□□□□ -0.83
HPS4-203ENST00000402105 CCDC174Q6PII3 467 aa9.9□□□□□ -0.83
HPS4-203ENST00000402105 TRPM8Q7Z2W7 1104 aa9.9□□□□□ -0.83
HPS4-203ENST00000402105 UBL4BQ8N7F7 174 aa9.9□□□□□ -0.83
HPS4-203ENST00000402105 SLC30A5Q8TAD4 765 aa9.9□□□□□ -0.83
HPS4-203ENST00000402105 ATG4AQ8WYN0 398 aa9.9□□□□□ -0.83
HPS4-203ENST00000402105 RFFLQ8WZ73 363 aa9.9□□□□□ -0.83
HPS4-203ENST00000402105 CCT6BQ92526 530 aa9.9□□□□□ -0.83
HPS4-203ENST00000402105 CALR3Q96L12 384 aaKnown RBP9.9□□□□□ -0.83
HPS4-203ENST00000402105 NSRP1Q9H0G5 558 aaKnown RBP9.9□□□□□ -0.83
HPS4-203ENST00000402105 TAOK3Q9H2K8 898 aa9.9□□□□□ -0.83
HPS4-203ENST00000402105 PABPC3Q9H361 631 aaKnown RBP9.9□□□□□ -0.83
HPS4-203ENST00000402105 ECT2Q9H8V3 914 aa9.9□□□□□ -0.83
HPS4-203ENST00000402105 ZNF142P52746 1687 aaPredicted RBP9.9□□□□□ -0.83
HPS4-203ENST00000402105 ANP32DO95626 131 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 HOXD13P35453 343 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 MYL7Q01449 175 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 DDR1Q08345 913 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 ERMARDQ5T6L9 678 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 CYP4F22Q6NT55 531 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 RPUSD2Q8IZ73 545 aaKnown RBP9.89□□□□□ -0.83
HPS4-203ENST00000402105 ARHGEF2Q92974 986 aaKnown RBP9.89□□□□□ -0.83
HPS4-203ENST00000402105 KAT5Q92993 513 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 CNOT10Q9H9A5 744 aaKnown RBP9.89□□□□□ -0.83
HPS4-203ENST00000402105 MCM8Q9UJA3 840 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 PNMA3Q9UL41 463 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 COG5Q9UP83 839 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 DAGLAQ9Y4D2 1042 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 NUP98P52948 1817 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 A0A1W2PRG0 241 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 ANKRD63C9JTQ0 380 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 FAM86B1E9PN63 330 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 EML1O00423 815 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 IGF2BP3O00425 579 aaKnown RBP eCLIP9.89□□□□□ -0.83
HPS4-203ENST00000402105 FAM86B2P0C5J1 330 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 COMTP21964 271 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 SLC8A1P32418 973 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 STX2P32856 288 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 GCKP35557 465 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 ERFP50548 548 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 NFIAQ12857 509 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 GRAPQ13588 217 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 SEPT2Q15019 361 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 EDRF1Q3B7T1 1238 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 DAB2IPQ5VWQ8 1189 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 KIAA0825Q8IV33 1275 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 ZFPM1Q8IX07 1006 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 SRRM1Q8IYB3 904 aaKnown RBP9.89□□□□□ -0.83
HPS4-203ENST00000402105 GRAPLQ8TC17 118 aaPredicted RBP9.89□□□□□ -0.83
HPS4-203ENST00000402105 DYDC2Q96IM9 177 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 FAM84AQ96KN4 292 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 NAP1L3Q99457 506 aaPredicted RBP9.89□□□□□ -0.83
HPS4-203ENST00000402105 INTS2Q9H0H0 1204 aaKnown RBP9.89□□□□□ -0.83
HPS4-203ENST00000402105 METTL14Q9HCE5 456 aaKnown RBP9.89□□□□□ -0.83
HPS4-203ENST00000402105 TYW1Q9NV66 732 aaKnown RBP9.89□□□□□ -0.83
HPS4-203ENST00000402105 PCDHA2Q9Y5H9 948 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 CASZ1Q86V15 1759 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 DDX60Q8IY21 1712 aaKnown RBP9.89□□□□□ -0.83
HPS4-203ENST00000402105 GPR75-ASB3A0A0A6YYF3 556 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 ESYT2A0FGR8 921 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 H0Y3Z8 333 aa9.89□□□□□ -0.83
HPS4-203ENST00000402105 HLA-DOAP06340 250 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms