RNA–Protein interactions for RNA: ENST00000400771.7

ATG4B-202, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 663 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-202ENST00000400771 THEGQ9P2T0 379 aa17.24■□□□□ 0.35
ATG4B-202ENST00000400771 NOL7Q9UMY1 257 aaKnown RBP17.24■□□□□ 0.35
ATG4B-202ENST00000400771 KIF3AQ9Y496 699 aa17.24■□□□□ 0.35
ATG4B-202ENST00000400771 GTF3C3Q9Y5Q9 886 aa17.24■□□□□ 0.35
ATG4B-202ENST00000400771 TRIP11Q15643 1979 aa17.23■□□□□ 0.35
ATG4B-202ENST00000400771 BMPR1AP36894 532 aa17.23■□□□□ 0.35
ATG4B-202ENST00000400771 DNM2P50570 870 aa17.23■□□□□ 0.35
ATG4B-202ENST00000400771 LAMTOR4Q0VGL1 99 aa17.23■□□□□ 0.35
ATG4B-202ENST00000400771 PTGDRQ13258 359 aa17.23■□□□□ 0.35
ATG4B-202ENST00000400771 IL17AQ16552 155 aa17.23■□□□□ 0.35
ATG4B-202ENST00000400771 ECM1Q16610 540 aa17.23■□□□□ 0.35
ATG4B-202ENST00000400771 FAM102BQ5T8I3 360 aa17.23■□□□□ 0.35
ATG4B-202ENST00000400771 OTUD6AQ7L8S5 288 aa17.23■□□□□ 0.35
ATG4B-202ENST00000400771 FERMT3Q86UX7 667 aa17.23■□□□□ 0.35
ATG4B-202ENST00000400771 ECHDC2Q86YB7 292 aa17.23■□□□□ 0.35
ATG4B-202ENST00000400771 IGSF22Q8N9C0 903 aa17.23■□□□□ 0.35
ATG4B-202ENST00000400771 ASAP3Q8TDY4 903 aa17.23■□□□□ 0.35
ATG4B-202ENST00000400771 PRPF31Q8WWY3 499 aaKnown RBP17.23■□□□□ 0.35
ATG4B-202ENST00000400771 IBSPP21815 317 aaPredicted RBP17.22■□□□□ 0.35
ATG4B-202ENST00000400771 SFPQP23246 707 aaKnown RBP eCLIP17.22■□□□□ 0.35
ATG4B-202ENST00000400771 RPA1P27694 616 aa17.22■□□□□ 0.35
ATG4B-202ENST00000400771 CDC42EP1Q00587 391 aa17.22■□□□□ 0.35
ATG4B-202ENST00000400771 GPM6BQ13491 265 aa17.22■□□□□ 0.35
ATG4B-202ENST00000400771 CAPSQ13938 189 aa17.22■□□□□ 0.35
ATG4B-202ENST00000400771 CLLU1OSQ5K130 101 aa17.22■□□□□ 0.35
ATG4B-202ENST00000400771 MRPL38Q96DV4 380 aaKnown RBP17.22■□□□□ 0.35
ATG4B-202ENST00000400771 TRAIPQ9BWF2 469 aa17.22■□□□□ 0.35
ATG4B-202ENST00000400771 ATP6V0A4Q9HBG4 840 aa17.22■□□□□ 0.35
ATG4B-202ENST00000400771 AGPAT5Q9NUQ2 364 aa17.22■□□□□ 0.35
ATG4B-202ENST00000400771 LRFN2Q9ULH4 789 aa17.22■□□□□ 0.35
ATG4B-202ENST00000400771 SMC3Q9UQE7 1217 aa17.22■□□□□ 0.35
ATG4B-202ENST00000400771 RWDD3Q9Y3V2 267 aa17.22■□□□□ 0.35
ATG4B-202ENST00000400771 GRM6O15303 877 aa17.21■□□□□ 0.35
ATG4B-202ENST00000400771 USO1O60763 962 aaKnown RBP17.21■□□□□ 0.35
ATG4B-202ENST00000400771 DGAT1O75907 488 aa17.21■□□□□ 0.35
ATG4B-202ENST00000400771 CAMK1Q14012 370 aa17.21■□□□□ 0.35
ATG4B-202ENST00000400771 IFNLR1Q8IU57 520 aaPredicted RBP17.21■□□□□ 0.35
ATG4B-202ENST00000400771 EXOC8Q8IYI6 725 aa17.21■□□□□ 0.35
ATG4B-202ENST00000400771 TCP11Q8WWU5 503 aa17.21■□□□□ 0.35
ATG4B-202ENST00000400771 CASD1Q96PB1 797 aa17.21■□□□□ 0.35
ATG4B-202ENST00000400771 C11orf84Q9BUA3 381 aaPredicted RBP17.21■□□□□ 0.35
ATG4B-202ENST00000400771 COL25A1Q9BXS0 654 aaPredicted RBP17.21■□□□□ 0.35
ATG4B-202ENST00000400771 CWH43Q9H720 699 aa17.21■□□□□ 0.35
ATG4B-202ENST00000400771 DBR1Q9UK59 544 aaKnown RBP17.21■□□□□ 0.35
ATG4B-202ENST00000400771 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.21■□□□□ 0.35
ATG4B-202ENST00000400771 PCDHB7Q9Y5E2 793 aa17.21■□□□□ 0.35
ATG4B-202ENST00000400771 PDCD11Q14690 1871 aaKnown RBP17.2■□□□□ 0.34
ATG4B-202ENST00000400771 A0A0U1RQF3 1178 aa17.2■□□□□ 0.34
ATG4B-202ENST00000400771 TBKBP1A7MCY6 615 aa17.2■□□□□ 0.34
ATG4B-202ENST00000400771 PP2D1A8MPX8 630 aa17.2■□□□□ 0.34
ATG4B-202ENST00000400771 ITGB1P05556 798 aa17.2■□□□□ 0.34
ATG4B-202ENST00000400771 RB1P06400 928 aa17.2■□□□□ 0.34
ATG4B-202ENST00000400771 GLRA2P23416 452 aa17.2■□□□□ 0.34
ATG4B-202ENST00000400771 DNAJB1P25685 340 aa17.2■□□□□ 0.34
ATG4B-202ENST00000400771 ARL2P36404 184 aa17.2■□□□□ 0.34
ATG4B-202ENST00000400771 PRPHP41219 470 aa17.2■□□□□ 0.34
ATG4B-202ENST00000400771 ATP2C1P98194 919 aaPredicted RBP17.2■□□□□ 0.34
ATG4B-202ENST00000400771 TFF2Q03403 129 aa17.2■□□□□ 0.34
ATG4B-202ENST00000400771 AMHR2Q16671 573 aa17.2■□□□□ 0.34
ATG4B-202ENST00000400771 RILPL1Q5EBL4 403 aa17.2■□□□□ 0.34
ATG4B-202ENST00000400771 MCTP1Q6DN14 999 aa17.2■□□□□ 0.34
ATG4B-202ENST00000400771 LRRC55Q6ZSA7 311 aa17.2■□□□□ 0.34
ATG4B-202ENST00000400771 RNF149Q8NC42 400 aa17.2■□□□□ 0.34
ATG4B-202ENST00000400771 P2RX5Q93086 422 aa17.2■□□□□ 0.34
ATG4B-202ENST00000400771 MMTAG2Q9BU76 263 aaKnown RBP17.2■□□□□ 0.34
ATG4B-202ENST00000400771 PLVAPQ9BX97 442 aa17.2■□□□□ 0.34
ATG4B-202ENST00000400771 GPRC5CQ9NQ84 441 aa17.2■□□□□ 0.34
ATG4B-202ENST00000400771 PIN4Q9Y237 131 aaKnown RBP17.2■□□□□ 0.34
ATG4B-202ENST00000400771 MEIS3P2A8K0S8 358 aa17.19■□□□□ 0.34
ATG4B-202ENST00000400771 XRCC6P12956 609 aaKnown RBP eCLIP17.19■□□□□ 0.34
ATG4B-202ENST00000400771 ZSCAN20P17040 1043 aaPredicted RBP17.19■□□□□ 0.34
ATG4B-202ENST00000400771 HOXA11P31270 313 aaPredicted RBP17.19■□□□□ 0.34
ATG4B-202ENST00000400771 PHKA2P46019 1235 aa17.19■□□□□ 0.34
ATG4B-202ENST00000400771 PTENP60484 403 aa17.19■□□□□ 0.34
ATG4B-202ENST00000400771 COL19A1Q14993 1142 aa17.19■□□□□ 0.34
ATG4B-202ENST00000400771 UBXN11Q5T124 520 aa17.19■□□□□ 0.34
ATG4B-202ENST00000400771 HAUS3Q68CZ6 603 aa17.19■□□□□ 0.34
ATG4B-202ENST00000400771 CATSPER4Q7RTX7 472 aa17.19■□□□□ 0.34
ATG4B-202ENST00000400771 SRGAP1Q7Z6B7 1085 aa17.19■□□□□ 0.34
ATG4B-202ENST00000400771 TMEM117Q9H0C3 514 aa17.19■□□□□ 0.34
ATG4B-202ENST00000400771 POLR3FQ9H1D9 316 aaPredicted RBP17.19■□□□□ 0.34
ATG4B-202ENST00000400771 CHST12Q9NRB3 414 aa17.19■□□□□ 0.34
ATG4B-202ENST00000400771 C5orf42Q9H799 3197 aa17.18■□□□□ 0.34
ATG4B-202ENST00000400771 H3BQV1 296 aa17.18■□□□□ 0.34
ATG4B-202ENST00000400771 LAD1O00515 517 aa17.18■□□□□ 0.34
ATG4B-202ENST00000400771 SRGAP2CP0DJJ0 459 aa17.18■□□□□ 0.34
ATG4B-202ENST00000400771 MUTP22033 750 aa17.18■□□□□ 0.34
ATG4B-202ENST00000400771 MBTD1Q05BQ5 628 aa17.18■□□□□ 0.34
ATG4B-202ENST00000400771 TIGD5Q53EQ6 642 aa17.18■□□□□ 0.34
ATG4B-202ENST00000400771 COLGALT1Q8NBJ5 622 aa17.18■□□□□ 0.34
ATG4B-202ENST00000400771 ERMNQ8TAM6 284 aa17.18■□□□□ 0.34
ATG4B-202ENST00000400771 ATXN2LQ8WWM7 1075 aaKnown RBP17.18■□□□□ 0.34
ATG4B-202ENST00000400771 BSNDQ8WZ55 320 aa17.18■□□□□ 0.34
ATG4B-202ENST00000400771 INO80BQ9C086 356 aaPredicted RBP17.18■□□□□ 0.34
ATG4B-202ENST00000400771 LMAN2LQ9H0V9 348 aa17.18■□□□□ 0.34
ATG4B-202ENST00000400771 ALG13Q9NP73 1137 aaKnown RBP17.18■□□□□ 0.34
ATG4B-202ENST00000400771 DACT1Q9NYF0 836 aa17.18■□□□□ 0.34
ATG4B-202ENST00000400771 LRWD1Q9UFC0 647 aa17.18■□□□□ 0.34
ATG4B-202ENST00000400771 PLAGL2Q9UPG8 496 aa17.18■□□□□ 0.34
ATG4B-202ENST00000400771 CITO14578 2027 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms