RNA–Protein interactions for RNA: ENST00000400540.5

LINC00544-201, long intergenic non-protein coding RNA 544, humanhuman

TSL 5 BASIC

Gene LINC00544, Length 1,031 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00544-201ENST00000400540 KREMEN2Q8NCW0 462 aa13.45□□□□□ -0.26
LINC00544-201ENST00000400540 AUTS2Q8WXX7 1259 aa13.45□□□□□ -0.26
LINC00544-201ENST00000400540 CASP10Q92851 521 aa13.45□□□□□ -0.26
LINC00544-201ENST00000400540 SLC5A5Q92911 643 aa13.45□□□□□ -0.26
LINC00544-201ENST00000400540 LPPQ93052 612 aa13.45□□□□□ -0.26
LINC00544-201ENST00000400540 CCDC136Q96JN2 1154 aa13.45□□□□□ -0.26
LINC00544-201ENST00000400540 SLC26A6Q9BXS9 759 aa13.45□□□□□ -0.26
LINC00544-201ENST00000400540 NRBP2Q9NSY0 501 aa13.45□□□□□ -0.26
LINC00544-201ENST00000400540 SEPT9Q9UHD8 586 aaPredicted RBP13.45□□□□□ -0.26
LINC00544-201ENST00000400540 SNX14Q9Y5W7 946 aa13.45□□□□□ -0.26
LINC00544-201ENST00000400540 ZFHX2Q9C0A1 2572 aaPredicted RBP13.44□□□□□ -0.26
LINC00544-201ENST00000400540 MEIS3P2A8K0S8 358 aa13.44□□□□□ -0.26
LINC00544-201ENST00000400540 GAS7O60861 476 aa13.44□□□□□ -0.26
LINC00544-201ENST00000400540 CDC45O75419 566 aa13.44□□□□□ -0.26
LINC00544-201ENST00000400540 BRD1O95696 1058 aa13.44□□□□□ -0.26
LINC00544-201ENST00000400540 HOXB8P17481 243 aaPredicted RBP13.44□□□□□ -0.26
LINC00544-201ENST00000400540 TBC1D8BQ0IIM8 1120 aa13.44□□□□□ -0.26
LINC00544-201ENST00000400540 TARBP2Q15633 366 aaKnown RBP13.44□□□□□ -0.26
LINC00544-201ENST00000400540 RARS2Q5T160 578 aaKnown RBP13.44□□□□□ -0.26
LINC00544-201ENST00000400540 BCL7CQ8WUZ0 217 aaPredicted RBP13.44□□□□□ -0.26
LINC00544-201ENST00000400540 KCNB2Q92953 911 aa13.44□□□□□ -0.26
LINC00544-201ENST00000400540 RIPOR3Q96MK2 946 aa13.44□□□□□ -0.26
LINC00544-201ENST00000400540 CEP89Q96ST8 783 aa13.44□□□□□ -0.26
LINC00544-201ENST00000400540 PRRX2Q99811 253 aa13.44□□□□□ -0.26
LINC00544-201ENST00000400540 TEKT3Q9BXF9 490 aa13.44□□□□□ -0.26
LINC00544-201ENST00000400540 ZBP1Q9H171 429 aa13.44□□□□□ -0.26
LINC00544-201ENST00000400540 ADAM7Q9H2U9 754 aa13.44□□□□□ -0.26
LINC00544-201ENST00000400540 NCOA5Q9HCD5 579 aaKnown RBP13.44□□□□□ -0.26
LINC00544-201ENST00000400540 A0A087WZ62 844 aa13.43□□□□□ -0.26
LINC00544-201ENST00000400540 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.43□□□□□ -0.26
LINC00544-201ENST00000400540 ZC3H11AO75152 810 aaKnown RBP eCLIP13.43□□□□□ -0.26
LINC00544-201ENST00000400540 STBD1O95210 358 aa13.43□□□□□ -0.26
LINC00544-201ENST00000400540 TDP2O95551 362 aa13.43□□□□□ -0.26
LINC00544-201ENST00000400540 EOMESO95936 686 aa13.43□□□□□ -0.26
LINC00544-201ENST00000400540 ASGR2P07307 311 aa13.43□□□□□ -0.26
LINC00544-201ENST00000400540 EPCAMP16422 314 aa13.43□□□□□ -0.26
LINC00544-201ENST00000400540 SFNP31947 248 aa13.43□□□□□ -0.26
LINC00544-201ENST00000400540 PHKA2P46019 1235 aa13.43□□□□□ -0.26
LINC00544-201ENST00000400540 JAK3P52333 1124 aa13.43□□□□□ -0.26
LINC00544-201ENST00000400540 CCT2P78371 535 aaKnown RBP13.43□□□□□ -0.26
LINC00544-201ENST00000400540 TPRNQ4KMQ1 711 aa13.43□□□□□ -0.26
LINC00544-201ENST00000400540 CES5AQ6NT32 575 aa13.43□□□□□ -0.26
LINC00544-201ENST00000400540 BLOC1S2Q6QNY1 142 aa13.43□□□□□ -0.26
LINC00544-201ENST00000400540 VPS52Q8N1B4 723 aa13.43□□□□□ -0.26
LINC00544-201ENST00000400540 CCDC148Q8NFR7 591 aa13.43□□□□□ -0.26
LINC00544-201ENST00000400540 BICD2Q8TD16 824 aa13.43□□□□□ -0.26
LINC00544-201ENST00000400540 TMEM169Q96HH4 297 aa13.43□□□□□ -0.26
LINC00544-201ENST00000400540 RIT2Q99578 217 aa13.43□□□□□ -0.26
LINC00544-201ENST00000400540 FDXACB1Q9BRP7 624 aaPredicted RBP13.43□□□□□ -0.26
LINC00544-201ENST00000400540 RNF26Q9BY78 433 aaPredicted RBP13.43□□□□□ -0.26
LINC00544-201ENST00000400540 MRPL9Q9BYD2 267 aaKnown RBP13.43□□□□□ -0.26
LINC00544-201ENST00000400540 NR2E1Q9Y466 385 aa13.43□□□□□ -0.26
LINC00544-201ENST00000400540 DCHS1Q96JQ0 3298 aa13.43□□□□□ -0.26
LINC00544-201ENST00000400540 CACNA1HO95180 2353 aa13.43□□□□□ -0.26
LINC00544-201ENST00000400540 MTCL1Q9Y4B5 1905 aaKnown RBP13.43□□□□□ -0.26
LINC00544-201ENST00000400540 H0Y858 1186 aa13.42□□□□□ -0.26
LINC00544-201ENST00000400540 B4GALT3O60512 393 aa13.42□□□□□ -0.26
LINC00544-201ENST00000400540 PSMD10O75832 226 aa13.42□□□□□ -0.26
LINC00544-201ENST00000400540 CXCL14O95715 111 aa13.42□□□□□ -0.26
LINC00544-201ENST00000400540 IFNAR1P17181 557 aa13.42□□□□□ -0.26
LINC00544-201ENST00000400540 RPS6KB1P23443 525 aa13.42□□□□□ -0.26
LINC00544-201ENST00000400540 HSPA4P34932 840 aa13.42□□□□□ -0.26
LINC00544-201ENST00000400540 AKAP17AQ02040 695 aaKnown RBP13.42□□□□□ -0.26
LINC00544-201ENST00000400540 ITIH3Q06033 890 aa13.42□□□□□ -0.26
LINC00544-201ENST00000400540 MTMR3Q13615 1198 aa13.42□□□□□ -0.26
LINC00544-201ENST00000400540 TWF2Q6IBS0 349 aaKnown RBP13.42□□□□□ -0.26
LINC00544-201ENST00000400540 MIER3Q7Z3K6 550 aa13.42□□□□□ -0.26
LINC00544-201ENST00000400540 KSR1Q8IVT5 923 aa13.42□□□□□ -0.26
LINC00544-201ENST00000400540 TBCKQ8TEA7 893 aa13.42□□□□□ -0.26
LINC00544-201ENST00000400540 ATOH1Q92858 354 aaPredicted RBP13.42□□□□□ -0.26
LINC00544-201ENST00000400540 NECTIN4Q96NY8 510 aa13.42□□□□□ -0.26
LINC00544-201ENST00000400540 VN1R3Q9BXE9 311 aa13.42□□□□□ -0.26
LINC00544-201ENST00000400540 AGXT2Q9BYV1 514 aa13.42□□□□□ -0.26
LINC00544-201ENST00000400540 GCOM2Q9BZD3 368 aaPredicted RBP13.42□□□□□ -0.26
LINC00544-201ENST00000400540 NRDE2Q9H7Z3 1164 aa13.42□□□□□ -0.26
LINC00544-201ENST00000400540 DACT1Q9NYF0 836 aa13.42□□□□□ -0.26
LINC00544-201ENST00000400540 DNAJB4Q9UDY4 337 aa13.42□□□□□ -0.26
LINC00544-201ENST00000400540 SORCS3Q9UPU3 1222 aa13.42□□□□□ -0.26
LINC00544-201ENST00000400540 PIN4Q9Y237 131 aaKnown RBP13.42□□□□□ -0.26
LINC00544-201ENST00000400540 INPP5FQ9Y2H2 1132 aa13.42□□□□□ -0.26
LINC00544-201ENST00000400540 FRYLO94915 3013 aa13.42□□□□□ -0.26
LINC00544-201ENST00000400540 IGKV6-21A0A0C4DH24 114 aa13.41□□□□□ -0.26
LINC00544-201ENST00000400540 GFRA3O60609 400 aa13.41□□□□□ -0.26
LINC00544-201ENST00000400540 ALDH7A1P49419 539 aaKnown RBP13.41□□□□□ -0.26
LINC00544-201ENST00000400540 USP11P51784 963 aa13.41□□□□□ -0.26
LINC00544-201ENST00000400540 NLRP5P59047 1200 aa13.41□□□□□ -0.26
LINC00544-201ENST00000400540 Q4G0T1 1027 aa13.41□□□□□ -0.26
LINC00544-201ENST00000400540 PLA2G4FQ68DD2 849 aa13.41□□□□□ -0.26
LINC00544-201ENST00000400540 B3GNT9Q6UX72 402 aa13.41□□□□□ -0.26
LINC00544-201ENST00000400540 RHPN2Q8IUC4 686 aa13.41□□□□□ -0.26
LINC00544-201ENST00000400540 ZNF710Q8N1W2 664 aa13.41□□□□□ -0.26
LINC00544-201ENST00000400540 TMEM105Q8N8V8 129 aa13.41□□□□□ -0.26
LINC00544-201ENST00000400540 IGSF21Q96ID5 467 aa13.41□□□□□ -0.26
LINC00544-201ENST00000400540 NIFKQ9BYG3 293 aaKnown RBP13.41□□□□□ -0.26
LINC00544-201ENST00000400540 GBP3Q9H0R5 595 aa13.41□□□□□ -0.26
LINC00544-201ENST00000400540 FAM105AQ9NUU6 356 aa13.41□□□□□ -0.26
LINC00544-201ENST00000400540 TBC1D13Q9NVG8 400 aa13.41□□□□□ -0.26
LINC00544-201ENST00000400540 ST18O60284 1047 aa13.4□□□□□ -0.26
LINC00544-201ENST00000400540 CTSAP10619 480 aa13.4□□□□□ -0.26
LINC00544-201ENST00000400540 SFPQP23246 707 aaKnown RBP eCLIP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms