RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 TUFT1Q9NNX1 390 aa9.38□□□□□ -0.91
USP16-202ENST00000399973 LRWD1Q9UFC0 647 aa9.38□□□□□ -0.91
USP16-202ENST00000399973 PPME1Q9Y570 386 aa9.38□□□□□ -0.91
USP16-202ENST00000399973 TDRD15B5MCY1 1934 aaKnown RBP9.38□□□□□ -0.91
USP16-202ENST00000399973 ARHGEF35A5YM69 484 aa9.37□□□□□ -0.91
USP16-202ENST00000399973 C9IYK1 514 aa9.37□□□□□ -0.91
USP16-202ENST00000399973 GAS2O43903 313 aaKnown RBP9.37□□□□□ -0.91
USP16-202ENST00000399973 LPXNO60711 386 aa9.37□□□□□ -0.91
USP16-202ENST00000399973 ERLIN2O94905 339 aa9.37□□□□□ -0.91
USP16-202ENST00000399973 PHKA2P46019 1235 aa9.37□□□□□ -0.91
USP16-202ENST00000399973 TOB1P50616 345 aaPredicted RBP9.37□□□□□ -0.91
USP16-202ENST00000399973 LAMTOR4Q0VGL1 99 aa9.37□□□□□ -0.91
USP16-202ENST00000399973 DSC3Q14574 896 aa9.37□□□□□ -0.91
USP16-202ENST00000399973 ZRSR1Q15695 479 aaKnown RBP9.37□□□□□ -0.91
USP16-202ENST00000399973 LONRF3Q496Y0 759 aa9.37□□□□□ -0.91
USP16-202ENST00000399973 RILPL1Q5EBL4 403 aa9.37□□□□□ -0.91
USP16-202ENST00000399973 TWF2Q6IBS0 349 aaKnown RBP9.37□□□□□ -0.91
USP16-202ENST00000399973 FERMT3Q86UX7 667 aa9.37□□□□□ -0.91
USP16-202ENST00000399973 CATSPER3Q86XQ3 398 aa9.37□□□□□ -0.91
USP16-202ENST00000399973 RNF149Q8NC42 400 aa9.37□□□□□ -0.91
USP16-202ENST00000399973 ZNF689Q96CS4 500 aaPredicted RBP9.37□□□□□ -0.91
USP16-202ENST00000399973 HSD17B14Q9BPX1 270 aa9.37□□□□□ -0.91
USP16-202ENST00000399973 C11orf84Q9BUA3 381 aaPredicted RBP9.37□□□□□ -0.91
USP16-202ENST00000399973 RAB34Q9BZG1 259 aa9.37□□□□□ -0.91
USP16-202ENST00000399973 INO80BQ9C086 356 aaPredicted RBP9.37□□□□□ -0.91
USP16-202ENST00000399973 POLR3FQ9H1D9 316 aaPredicted RBP9.37□□□□□ -0.91
USP16-202ENST00000399973 XPNPEP1Q9NQW7 623 aa9.37□□□□□ -0.91
USP16-202ENST00000399973 ANKEF1Q9NU02 776 aa9.37□□□□□ -0.91
USP16-202ENST00000399973 TMEM161AQ9NX61 479 aa9.37□□□□□ -0.91
USP16-202ENST00000399973 HCSTQ9UBK5 93 aa9.37□□□□□ -0.91
USP16-202ENST00000399973 RWDD3Q9Y3V2 267 aa9.37□□□□□ -0.91
USP16-202ENST00000399973 TCF20Q9UGU0 1960 aaKnown RBP9.37□□□□□ -0.91
USP16-202ENST00000399973 LRRIQ4A6NIV6 560 aa9.36□□□□□ -0.91
USP16-202ENST00000399973 PP2D1A8MPX8 630 aa9.36□□□□□ -0.91
USP16-202ENST00000399973 INO80B-WBP1J3KQ70 363 aa9.36□□□□□ -0.91
USP16-202ENST00000399973 DGAT1O75907 488 aa9.36□□□□□ -0.91
USP16-202ENST00000399973 LYPLA2O95372 231 aa9.36□□□□□ -0.91
USP16-202ENST00000399973 SPATA31C1P0DKV0 1188 aa9.36□□□□□ -0.91
USP16-202ENST00000399973 RARRES1P49788 294 aa9.36□□□□□ -0.91
USP16-202ENST00000399973 FXR2P51116 673 aaKnown RBP eCLIP9.36□□□□□ -0.91
USP16-202ENST00000399973 CDC42EP1Q00587 391 aa9.36□□□□□ -0.91
USP16-202ENST00000399973 CAPSQ13938 189 aa9.36□□□□□ -0.91
USP16-202ENST00000399973 TFDP1Q14186 410 aa9.36□□□□□ -0.91
USP16-202ENST00000399973 PTPROQ16827 1216 aa9.36□□□□□ -0.91
USP16-202ENST00000399973 TIGD5Q53EQ6 642 aa9.36□□□□□ -0.91
USP16-202ENST00000399973 FAM102BQ5T8I3 360 aa9.36□□□□□ -0.91
USP16-202ENST00000399973 ECHDC2Q86YB7 292 aa9.36□□□□□ -0.91
USP16-202ENST00000399973 HELQQ8TDG4 1101 aa9.36□□□□□ -0.91
USP16-202ENST00000399973 ASAP3Q8TDY4 903 aa9.36□□□□□ -0.91
USP16-202ENST00000399973 NACC1Q96RE7 527 aa9.36□□□□□ -0.91
USP16-202ENST00000399973 ALG13Q9NP73 1137 aaKnown RBP9.36□□□□□ -0.91
USP16-202ENST00000399973 GPRC5CQ9NQ84 441 aa9.36□□□□□ -0.91
USP16-202ENST00000399973 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.36□□□□□ -0.91
USP16-202ENST00000399973 DACT1Q9NYF0 836 aa9.36□□□□□ -0.91
USP16-202ENST00000399973 REV3LO60673 3130 aa9.36□□□□□ -0.91
USP16-202ENST00000399973 VWA3AA6NCI4 1184 aa9.35□□□□□ -0.91
USP16-202ENST00000399973 H3BNC9 293 aa9.35□□□□□ -0.91
USP16-202ENST00000399973 K7ELQ4 463 aaPredicted RBP9.35□□□□□ -0.91
USP16-202ENST00000399973 LAD1O00515 517 aa9.35□□□□□ -0.91
USP16-202ENST00000399973 GRM6O15303 877 aa9.35□□□□□ -0.91
USP16-202ENST00000399973 HOXA2O43364 376 aa9.35□□□□□ -0.91
USP16-202ENST00000399973 LIG1P18858 919 aa9.35□□□□□ -0.91
USP16-202ENST00000399973 RPA1P27694 616 aa9.35□□□□□ -0.91
USP16-202ENST00000399973 BMPR1AP36894 532 aa9.35□□□□□ -0.91
USP16-202ENST00000399973 TFF2Q03403 129 aa9.35□□□□□ -0.91
USP16-202ENST00000399973 CUL4AQ13619 759 aa9.35□□□□□ -0.91
USP16-202ENST00000399973 MXD4Q14582 209 aaPredicted RBP9.35□□□□□ -0.91
USP16-202ENST00000399973 TMEM132AQ24JP5 1023 aa9.35□□□□□ -0.91
USP16-202ENST00000399973 KRT79Q5XKE5 535 aa9.35□□□□□ -0.91
USP16-202ENST00000399973 DTHD1Q6ZMT9 781 aa9.35□□□□□ -0.91
USP16-202ENST00000399973 EP400NLQ6ZTU2 488 aa9.35□□□□□ -0.91
USP16-202ENST00000399973 CRIPAKQ8N1N5 446 aa9.35□□□□□ -0.91
USP16-202ENST00000399973 LRRC43Q8N309 656 aa9.35□□□□□ -0.91
USP16-202ENST00000399973 C4orf32Q8N8J7 132 aa9.35□□□□□ -0.91
USP16-202ENST00000399973 LPPQ93052 612 aa9.35□□□□□ -0.91
USP16-202ENST00000399973 MRPL38Q96DV4 380 aaKnown RBP9.35□□□□□ -0.91
USP16-202ENST00000399973 POLR3CQ9BUI4 534 aaPredicted RBP9.35□□□□□ -0.91
USP16-202ENST00000399973 TMEM117Q9H0C3 514 aa9.35□□□□□ -0.91
USP16-202ENST00000399973 ELAC1Q9H777 363 aaKnown RBP9.35□□□□□ -0.91
USP16-202ENST00000399973 MINDY3Q9H8M7 445 aa9.35□□□□□ -0.91
USP16-202ENST00000399973 IFT122Q9HBG6 1241 aa9.35□□□□□ -0.91
USP16-202ENST00000399973 AAASQ9NRG9 546 aa9.35□□□□□ -0.91
USP16-202ENST00000399973 AGPAT5Q9NUQ2 364 aa9.35□□□□□ -0.91
USP16-202ENST00000399973 DDX19AQ9NUU7 478 aaKnown RBP9.35□□□□□ -0.91
USP16-202ENST00000399973 KIAA1024Q9UPX6 916 aa9.35□□□□□ -0.91
USP16-202ENST00000399973 INPP5FQ9Y2H2 1132 aa9.35□□□□□ -0.91
USP16-202ENST00000399973 UNC80Q8N2C7 3258 aa9.35□□□□□ -0.91
USP16-202ENST00000399973 ASAP2O43150 1006 aa9.34□□□□□ -0.91
USP16-202ENST00000399973 SSBP05455 408 aaKnown RBP eCLIP9.34□□□□□ -0.91
USP16-202ENST00000399973 RB1P06400 928 aa9.34□□□□□ -0.91
USP16-202ENST00000399973 HSP90AA1P07900 732 aaKnown RBP9.34□□□□□ -0.91
USP16-202ENST00000399973 LINC00271P0C7V0 271 aa9.34□□□□□ -0.91
USP16-202ENST00000399973 LAG3P18627 525 aa9.34□□□□□ -0.91
USP16-202ENST00000399973 POU3F3P20264 500 aaPredicted RBP9.34□□□□□ -0.91
USP16-202ENST00000399973 PDCP20941 246 aa9.34□□□□□ -0.91
USP16-202ENST00000399973 GLRA2P23416 452 aa9.34□□□□□ -0.91
USP16-202ENST00000399973 CDC25AP30304 524 aa9.34□□□□□ -0.91
USP16-202ENST00000399973 PBX3P40426 434 aa9.34□□□□□ -0.91
USP16-202ENST00000399973 PRPHP41219 470 aa9.34□□□□□ -0.91
USP16-202ENST00000399973 RAB27AP51159 221 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms