RNA–Protein interactions for RNA: ENST00000399793.6

RETREG1-202, Transcript of reticulophagy regulator 1, humanhuman

TSL 1 (best) BASIC

Gene RETREG1, Length 3,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-202ENST00000399793 MKRN3Q13064 507 aaKnown RBP9.37□□□□□ -0.91
RETREG1-202ENST00000399793 ZNF174Q15697 407 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 VSTM1Q6UX27 236 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 IQCF2Q8IXL9 164 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 MYOCDQ8IZQ8 938 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 METTL13Q8N6R0 699 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 DQX1Q8TE96 717 aaKnown RBP9.37□□□□□ -0.91
RETREG1-202ENST00000399793 GAB3Q8WWW8 586 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 BAP1Q92560 729 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 HSPBAP1Q96EW2 488 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 FAIMQ9NVQ4 179 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 UBAP1Q9NZ09 502 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 STX18Q9P2W9 335 aaKnown RBP9.37□□□□□ -0.91
RETREG1-202ENST00000399793 TRAFD1O14545 582 aaPredicted RBP9.37□□□□□ -0.91
RETREG1-202ENST00000399793 BIRC5O15392 142 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 LDHAP00338 332 aaKnown RBP9.37□□□□□ -0.91
RETREG1-202ENST00000399793 PTPN4P29074 926 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 HOXD11P31277 338 aaPredicted RBP9.37□□□□□ -0.91
RETREG1-202ENST00000399793 RGS2P41220 211 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 USP11P51784 963 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 ARFIP2P53365 341 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 PLTPP55058 493 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 KLRC3Q07444 240 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 DCTN2Q13561 401 aaKnown RBP9.37□□□□□ -0.91
RETREG1-202ENST00000399793 KLHL35Q6PF15 583 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 BTNL9Q6UXG8 535 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 CROCCP2Q86T23 111 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 NELFCDQ8IXH7 590 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 OGFOD1Q8N543 542 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 CLIP3Q96DZ5 547 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 MIPEPQ99797 713 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 PACSIN1Q9BY11 444 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 PITPNM3Q9BZ71 974 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 TAOK3Q9H2K8 898 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 METTL14Q9HCE5 456 aaKnown RBP9.37□□□□□ -0.91
RETREG1-202ENST00000399793 TBCCD1Q9NVR7 557 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 TUBA8Q9NY65 449 aaPredicted RBP9.37□□□□□ -0.91
RETREG1-202ENST00000399793 ZNF212Q9UDV6 495 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 CNOT7Q9UIV1 285 aaKnown RBP9.37□□□□□ -0.91
RETREG1-202ENST00000399793 RASAL2Q9UJF2 1139 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 WASF2Q9Y6W5 498 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 UMODL1Q5DID0 1318 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 PNPLA7Q6ZV29 1317 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 IGSF1Q8N6C5 1336 aa9.37□□□□□ -0.91
RETREG1-202ENST00000399793 SMIM31A0A1B0GVY4 71 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 DDX3XO00571 662 aaKnown RBP eCLIP9.36□□□□□ -0.91
RETREG1-202ENST00000399793 MAPK13O15264 365 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 GSTT2P0CG29 244 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 GSTT2BP0CG30 244 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 PDE1BQ01064 536 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 ANKRD40Q6AI12 368 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 PDXDC1Q6P996 788 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 TRIM22Q8IYM9 498 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 RPTORQ8N122 1335 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 CMTR1Q8N1G2 835 aaKnown RBP9.36□□□□□ -0.91
RETREG1-202ENST00000399793 ESR2Q92731 530 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 GRAMD1AQ96CP6 724 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 TMEM109Q9BVC6 243 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 NLRC4Q9NPP4 1024 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 SPO11Q9Y5K1 396 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 DIP2AQ14689 1571 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 KANSL1LA0AUZ9 987 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 FOXO6A8MYZ6 492 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 B4E1Z4 1266 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 PDE5AO76074 875 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 STX2P32856 288 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 VPS41P49754 854 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 TIMM10P62072 90 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 POU5F1Q01860 360 aaKnown RBP9.36□□□□□ -0.91
RETREG1-202ENST00000399793 MPP2Q14168 576 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 CCDC174Q6PII3 467 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 IZUMO2Q6UXV1 221 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 B3GNT6Q6ZMB0 384 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 BARGINQ6ZT62 677 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 TBC1D10CQ8IV04 446 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 CEP70Q8NHQ1 597 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 FNDC8Q8TC99 324 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 IGDCC4Q8TDY8 1250 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 DGCR14Q96DF8 476 aaKnown RBP9.36□□□□□ -0.91
RETREG1-202ENST00000399793 MAML3Q96JK9 1138 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 CADM1Q9BY67 442 aaKnown RBP9.36□□□□□ -0.91
RETREG1-202ENST00000399793 NT5C3AQ9H0P0 336 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 TUT1Q9H6E5 874 aaKnown RBP9.36□□□□□ -0.91
RETREG1-202ENST00000399793 LY9Q9HBG7 655 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 KIAA1522Q9P206 1035 aaPredicted RBP9.36□□□□□ -0.91
RETREG1-202ENST00000399793 HESX1Q9UBX0 185 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 CCDC61Q9Y6R9 512 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 WDR46O15213 610 aaKnown RBP9.36□□□□□ -0.91
RETREG1-202ENST00000399793 SERPINB7O75635 380 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 IGKV5-2P06315 115 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 PDGFRBP09619 1106 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 PLCG2P16885 1265 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 XBP1P17861 261 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 CDR2Q01850 454 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 FBXO25Q8TCJ0 367 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 STMN2Q93045 179 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 HNRNPABQ99729 332 aaKnown RBP9.36□□□□□ -0.91
RETREG1-202ENST00000399793 SYNCQ9H7C4 482 aa9.36□□□□□ -0.91
RETREG1-202ENST00000399793 ZFYP08048 801 aaPredicted RBP9.35□□□□□ -0.91
RETREG1-202ENST00000399793 IFIT1P09914 478 aaKnown RBP9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms