RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 MMS22LQ6ZRQ5 1243 aa13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 VSTM4Q8IW00 320 aa13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 PIDD1Q9HB75 910 aa13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 PI4KBQ9UBF8 816 aa13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 SRPRBQ9Y5M8 271 aaKnown RBP13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 ABCC4O15439 1325 aa13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 ASAP2O43150 1006 aa13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 HAUS5O94927 633 aa13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 TBC1D19Q8N5T2 526 aa13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 TOPORSQ9NS56 1045 aaPredicted RBP13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 SAMSN1Q9NSI8 373 aaKnown RBP13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 SENP1Q9P0U3 644 aa13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 PALMO75781 387 aa13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 PHKA2P46019 1235 aa13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 CRKLP46109 303 aaKnown RBP13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 MAPRE2Q15555 327 aa13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 NAALADL2Q58DX5 795 aa13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 THEMIS2Q5TEJ8 643 aa13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 ITPRIPL1Q6GPH6 555 aa13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 PCDHGB4Q9UN71 923 aa13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 ARHGAP10A1A4S6 786 aa13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 KRT87PA6NCN2 255 aa13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 PASD1Q8IV76 773 aa13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 KIAA1586Q9HCI6 787 aa13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 CNOT8Q9UFF9 292 aaKnown RBP13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.1□□□□□ -0.31
CACNA1C-219ENST00000399649 UBA6A0AVT1 1052 aaPredicted RBP13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 H0Y3Z8 333 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 WBP4O75554 376 aaKnown RBP13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 ADD2P35612 726 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 BEND6Q5SZJ8 279 aaPredicted RBP13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 EMBQ6PCB8 327 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 PLEKHM3Q6ZWE6 761 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 FAM167AQ96KS9 214 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 RUBCNLQ9H714 662 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 ABCB6Q9NP58 842 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 ZFYVE16Q7Z3T8 1539 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 GSNP06396 782 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 HOXA13P31271 388 aaPredicted RBP13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 SERPINB10P48595 397 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 SLC10A4Q96EP9 437 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 SERPINB13Q9UIV8 391 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 DNAJC12Q9UKB3 198 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 POTEB3A0JP26 581 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 SH2B2O14492 632 aaPredicted RBP13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 ROR1Q01973 937 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 NFX1Q12986 1120 aaKnown RBP13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 TBC1D9BQ66K14 1250 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 USP17L2Q6R6M4 530 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 POTEBQ6S5H4 581 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 EFHBQ8N7U6 833 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 SPDYE5A6NIY4 337 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 F5H423 210 aaPredicted RBP13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 PIK3R2O00459 728 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 EIF2AK2P19525 551 aaKnown RBP13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 SNAP25P60880 206 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 GPC5P78333 572 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 KIF23Q02241 960 aaPredicted RBP13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 SPDYE7PQ495Y7 208 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 OLFM3Q96PB7 478 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 GPR108Q9NPR9 543 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 ZNF229Q9UJW7 825 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 PDHA1P08559 390 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 IL10P22301 178 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 MIGA2Q7L4E1 593 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 THNSL1Q8IYQ7 743 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 TMEM35BQ8NCS4 154 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 NSUN7Q8NE18 718 aaKnown RBP13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 YIPF2Q9BWQ6 316 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 ECT2Q9H8V3 914 aa13.09□□□□□ -0.31
CACNA1C-219ENST00000399649 M0QYV0 167 aa13.08□□□□□ -0.31
CACNA1C-219ENST00000399649 KDM1AO60341 852 aa13.08□□□□□ -0.31
CACNA1C-219ENST00000399649 KCNA2P16389 499 aa13.08□□□□□ -0.31
CACNA1C-219ENST00000399649 PMS2P54278 862 aa13.08□□□□□ -0.31
CACNA1C-219ENST00000399649 DMC1Q14565 340 aa13.08□□□□□ -0.31
CACNA1C-219ENST00000399649 HEATR6Q6AI08 1181 aaKnown RBP13.08□□□□□ -0.31
CACNA1C-219ENST00000399649 ALKBH5Q6P6C2 394 aaKnown RBP13.08□□□□□ -0.31
CACNA1C-219ENST00000399649 BTN2A2Q8WVV5 523 aa13.08□□□□□ -0.31
CACNA1C-219ENST00000399649 HEMGNQ9BXL5 484 aa13.08□□□□□ -0.31
CACNA1C-219ENST00000399649 CEP72Q9P209 647 aa13.08□□□□□ -0.31
CACNA1C-219ENST00000399649 ERBB4Q15303 1308 aa13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 A0A1B0GW55 424 aa13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 PRR23D1E9PI22 279 aaPredicted RBP13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 CLDN3O15551 220 aa13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 DUX4L2P0CJ85 424 aa13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 DUX4L3P0CJ86 424 aa13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 DUX4L4P0CJ87 422 aa13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 DUX4L5P0CJ88 424 aa13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 DUX4L6P0CJ89 424 aa13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 DUX4L7P0CJ90 424 aa13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 PRR23D2P0DMB1 279 aaPredicted RBP13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 PRAMEP78395 509 aa13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 ZNF394Q53GI3 561 aa13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 YAF2Q8IY57 180 aa13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 ZNF555Q8NEP9 628 aa13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 SH3GLB2Q9NR46 395 aa13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 DDX28Q9NUL7 540 aaKnown RBP13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 DDX56Q9NY93 547 aaKnown RBP13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 DUX4Q9UBX2 424 aa13.08□□□□□ -0.32
CACNA1C-219ENST00000399649 IP6K2Q9UHH9 426 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms