RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 PHOSPHO2Q8TCD6 241 aa19.58■□□□□ 0.72
CTNS-203ENST00000399306 LRRC15Q8TF66 581 aa19.58■□□□□ 0.72
CTNS-203ENST00000399306 TMEM40Q8WWA1 233 aa19.58■□□□□ 0.72
CTNS-203ENST00000399306 KCNN1Q92952 543 aa19.58■□□□□ 0.72
CTNS-203ENST00000399306 PLIN2Q99541 437 aa19.58■□□□□ 0.72
CTNS-203ENST00000399306 FDXACB1Q9BRP7 624 aaPredicted RBP19.58■□□□□ 0.72
CTNS-203ENST00000399306 LRRC27Q9C0I9 530 aa19.58■□□□□ 0.72
CTNS-203ENST00000399306 AGO3Q9H9G7 860 aaKnown RBP19.58■□□□□ 0.72
CTNS-203ENST00000399306 IFT122Q9HBG6 1241 aa19.58■□□□□ 0.72
CTNS-203ENST00000399306 ERVK-5Q9HDB9 667 aa19.58■□□□□ 0.72
CTNS-203ENST00000399306 USP25Q9UHP3 1055 aa19.58■□□□□ 0.72
CTNS-203ENST00000399306 PADI3Q9ULW8 664 aa19.58■□□□□ 0.72
CTNS-203ENST00000399306 TRIOBPQ9H2D6 2365 aa19.57■□□□□ 0.72
CTNS-203ENST00000399306 SFPQP23246 707 aaKnown RBP eCLIP19.57■□□□□ 0.72
CTNS-203ENST00000399306 CAPSQ13938 189 aa19.57■□□□□ 0.72
CTNS-203ENST00000399306 SHHQ15465 462 aa19.57■□□□□ 0.72
CTNS-203ENST00000399306 E2F4Q16254 413 aa19.57■□□□□ 0.72
CTNS-203ENST00000399306 FAM102BQ5T8I3 360 aa19.57■□□□□ 0.72
CTNS-203ENST00000399306 SV2BQ7L1I2 683 aa19.57■□□□□ 0.72
CTNS-203ENST00000399306 RNF149Q8NC42 400 aa19.57■□□□□ 0.72
CTNS-203ENST00000399306 ASAP3Q8TDY4 903 aa19.57■□□□□ 0.72
CTNS-203ENST00000399306 IFT74Q96LB3 600 aa19.57■□□□□ 0.72
CTNS-203ENST00000399306 NLRP4Q96MN2 994 aa19.57■□□□□ 0.72
CTNS-203ENST00000399306 SCLT1Q96NL6 688 aa19.57■□□□□ 0.72
CTNS-203ENST00000399306 RUSC1Q9BVN2 902 aa19.57■□□□□ 0.72
CTNS-203ENST00000399306 C2orf40Q9H1Z8 148 aa19.57■□□□□ 0.72
CTNS-203ENST00000399306 TNMDQ9H2S6 317 aa19.57■□□□□ 0.72
CTNS-203ENST00000399306 CHST12Q9NRB3 414 aa19.57■□□□□ 0.72
CTNS-203ENST00000399306 RNF216Q9NWF9 866 aaPredicted RBP19.57■□□□□ 0.72
CTNS-203ENST00000399306 COLQQ9Y215 455 aaPredicted RBP19.57■□□□□ 0.72
CTNS-203ENST00000399306 GINS2Q9Y248 185 aa19.57■□□□□ 0.72
CTNS-203ENST00000399306 NOC2LQ9Y3T9 749 aaKnown RBP19.57■□□□□ 0.72
CTNS-203ENST00000399306 SSBP05455 408 aaKnown RBP eCLIP19.56■□□□□ 0.72
CTNS-203ENST00000399306 CD52P31358 61 aa19.56■□□□□ 0.72
CTNS-203ENST00000399306 MCM6Q14566 821 aa19.56■□□□□ 0.72
CTNS-203ENST00000399306 LRIT3Q3SXY7 679 aa19.56■□□□□ 0.72
CTNS-203ENST00000399306 ARSHQ5FYA8 562 aa19.56■□□□□ 0.72
CTNS-203ENST00000399306 C9orf50Q5SZB4 431 aa19.56■□□□□ 0.72
CTNS-203ENST00000399306 CDCA2Q69YH5 1023 aaPredicted RBP19.56■□□□□ 0.72
CTNS-203ENST00000399306 CLEC17AQ6ZS10 378 aa19.56■□□□□ 0.72
CTNS-203ENST00000399306 FAM228AQ86W67 206 aa19.56■□□□□ 0.72
CTNS-203ENST00000399306 RNPC3Q96LT9 517 aaKnown RBP19.56■□□□□ 0.72
CTNS-203ENST00000399306 SLC9A7Q96T83 725 aa19.56■□□□□ 0.72
CTNS-203ENST00000399306 NTPCRQ9BSD7 190 aaKnown RBP19.56■□□□□ 0.72
CTNS-203ENST00000399306 BMP2KQ9NSY1 1161 aaPredicted RBP19.56■□□□□ 0.72
CTNS-203ENST00000399306 KCNH3Q9ULD8 1083 aa19.56■□□□□ 0.72
CTNS-203ENST00000399306 ST3GAL5Q9UNP4 418 aa19.56■□□□□ 0.72
CTNS-203ENST00000399306 HPSEQ9Y251 543 aa19.56■□□□□ 0.72
CTNS-203ENST00000399306 A0A087X0B3 334 aa19.55■□□□□ 0.72
CTNS-203ENST00000399306 HIP1RO75146 1068 aa19.55■□□□□ 0.72
CTNS-203ENST00000399306 ZNF131P52739 623 aa19.55■□□□□ 0.72
CTNS-203ENST00000399306 TTC3P53804 2025 aa19.55■□□□□ 0.72
CTNS-203ENST00000399306 AMPD3Q01432 767 aa19.55■□□□□ 0.72
CTNS-203ENST00000399306 MAPK7Q13164 816 aa19.55■□□□□ 0.72
CTNS-203ENST00000399306 CNNM4Q6P4Q7 775 aa19.55■□□□□ 0.72
CTNS-203ENST00000399306 OTOP2Q7RTS6 562 aa19.55■□□□□ 0.72
CTNS-203ENST00000399306 GPBP1Q86WP2 473 aa19.55■□□□□ 0.72
CTNS-203ENST00000399306 KSR1Q8IVT5 923 aa19.55■□□□□ 0.72
CTNS-203ENST00000399306 DAW1Q8N136 415 aa19.55■□□□□ 0.72
CTNS-203ENST00000399306 SPIRE2Q8WWL2 714 aa19.55■□□□□ 0.72
CTNS-203ENST00000399306 CHAMP1Q96JM3 812 aa19.55■□□□□ 0.72
CTNS-203ENST00000399306 OSBPL7Q9BZF2 842 aa19.55■□□□□ 0.72
CTNS-203ENST00000399306 GPRC5CQ9NQ84 441 aa19.55■□□□□ 0.72
CTNS-203ENST00000399306 KBTBD4Q9NVX7 518 aa19.55■□□□□ 0.72
CTNS-203ENST00000399306 LARSQ9P2J5 1176 aaKnown RBP19.55■□□□□ 0.72
CTNS-203ENST00000399306 SRGAP2CP0DJJ0 459 aa19.54■□□□□ 0.72
CTNS-203ENST00000399306 AXLP30530 894 aa19.54■□□□□ 0.72
CTNS-203ENST00000399306 ABCD1P33897 745 aa19.54■□□□□ 0.72
CTNS-203ENST00000399306 KCNJ6P48051 423 aa19.54■□□□□ 0.72
CTNS-203ENST00000399306 EFNA5P52803 228 aa19.54■□□□□ 0.72
CTNS-203ENST00000399306 FAM187BQ17R55 369 aa19.54■□□□□ 0.72
CTNS-203ENST00000399306 PPP4R3CPQ6ZMV5 832 aa19.54■□□□□ 0.72
CTNS-203ENST00000399306 ZBTB8OSQ8IWT0 167 aa19.54■□□□□ 0.72
CTNS-203ENST00000399306 TMEM87AQ8NBN3 555 aa19.54■□□□□ 0.72
CTNS-203ENST00000399306 MRPS27Q92552 414 aaKnown RBP19.54■□□□□ 0.72
CTNS-203ENST00000399306 PRIMPOLQ96LW4 560 aa19.54■□□□□ 0.72
CTNS-203ENST00000399306 TRAIPQ9BWF2 469 aa19.54■□□□□ 0.72
CTNS-203ENST00000399306 TSPYL2Q9H2G4 693 aaPredicted RBP19.54■□□□□ 0.72
CTNS-203ENST00000399306 C1orf112Q9NSG2 853 aa19.54■□□□□ 0.72
CTNS-203ENST00000399306 SLC4A7Q9Y6M7 1214 aa19.54■□□□□ 0.72
CTNS-203ENST00000399306 H0YCG3 227 aa19.53■□□□□ 0.72
CTNS-203ENST00000399306 POLR2DO15514 142 aaKnown RBP19.53■□□□□ 0.72
CTNS-203ENST00000399306 PLS3P13797 630 aa19.53■□□□□ 0.72
CTNS-203ENST00000399306 PFKFB1P16118 471 aa19.53■□□□□ 0.72
CTNS-203ENST00000399306 WDR5P61964 334 aaKnown RBP19.53■□□□□ 0.72
CTNS-203ENST00000399306 NFX1Q12986 1120 aaKnown RBP19.53■□□□□ 0.72
CTNS-203ENST00000399306 DMP1Q13316 513 aaPredicted RBP19.53■□□□□ 0.72
CTNS-203ENST00000399306 DSC3Q14574 896 aa19.53■□□□□ 0.72
CTNS-203ENST00000399306 MAEAQ7L5Y9 396 aa19.53■□□□□ 0.72
CTNS-203ENST00000399306 PDILTQ8N807 584 aa19.53■□□□□ 0.72
CTNS-203ENST00000399306 SLC17A8Q8NDX2 589 aa19.53■□□□□ 0.72
CTNS-203ENST00000399306 PPP1R16BQ96T49 567 aa19.53■□□□□ 0.72
CTNS-203ENST00000399306 RGS18Q9NS28 235 aa19.53■□□□□ 0.72
CTNS-203ENST00000399306 PRMT7Q9NVM4 692 aaPredicted RBP19.53■□□□□ 0.72
CTNS-203ENST00000399306 DACT1Q9NYF0 836 aa19.53■□□□□ 0.72
CTNS-203ENST00000399306 PCDH10Q9P2E7 1040 aa19.53■□□□□ 0.72
CTNS-203ENST00000399306 SEL1LQ9UBV2 794 aa19.53■□□□□ 0.72
CTNS-203ENST00000399306 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.52■□□□□ 0.72
CTNS-203ENST00000399306 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.52■□□□□ 0.72
CTNS-203ENST00000399306 GOLGA6L4A6NEF3 574 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms