RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 RNF103-CHMP3A0A140T963 221 aa12.57□□□□□ -0.4
TMF1-201ENST00000398559 CCNA1P78396 465 aa12.57□□□□□ -0.4
TMF1-201ENST00000398559 GUCY1A3Q02108 690 aa12.57□□□□□ -0.4
TMF1-201ENST00000398559 PDIA2Q13087 525 aaKnown RBP12.57□□□□□ -0.4
TMF1-201ENST00000398559 TEDDM1Q5T9Z0 273 aa12.57□□□□□ -0.4
TMF1-201ENST00000398559 DSTYKQ6XUX3 929 aa12.57□□□□□ -0.4
TMF1-201ENST00000398559 ANO5Q75V66 913 aa12.57□□□□□ -0.4
TMF1-201ENST00000398559 FSD1LQ9BXM9 530 aa12.57□□□□□ -0.4
TMF1-201ENST00000398559 CHRNA3P32297 505 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 HADHAP40939 763 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 FAM83BQ5T0W9 1011 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 TMEM270Q6UE05 265 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 MIGA2Q7L4E1 593 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 ZBED8Q8IZ13 594 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 STRBPQ96SI9 672 aaKnown RBP12.56□□□□□ -0.4
TMF1-201ENST00000398559 IRAK4Q9NWZ3 460 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 E9PMD0 336 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 BNIP3LO60238 219 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 PPARGP37231 505 aaPredicted RBP12.56□□□□□ -0.4
TMF1-201ENST00000398559 SLC26A7Q8TE54 656 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 CYP26B1Q9NR63 512 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 FBXL5Q9UKA1 691 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 SUFUQ9UMX1 484 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 ERVK-7P63135 1459 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 CFAP69A5D8W1 941 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 CSPG5O95196 566 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 DAB2P98082 770 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 SLC27A3Q5K4L6 730 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 CCDC137Q6PK04 289 aaKnown RBP12.56□□□□□ -0.4
TMF1-201ENST00000398559 CCNYL1Q8N7R7 359 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.56□□□□□ -0.4
TMF1-201ENST00000398559 C11orf70Q9BRQ4 267 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 KIF17Q9P2E2 1029 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 TTC26A0AVF1 554 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 USP17L5A8MUK1 530 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 KRT14P02533 472 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 CALB1P05937 261 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 KCNA1Q09470 495 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 THNSL1Q8IYQ7 743 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 TMEM35BQ8NCS4 154 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 PRMT1Q99873 361 aaKnown RBP12.56□□□□□ -0.4
TMF1-201ENST00000398559 UBE4BO95155 1302 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 PTCH1Q13635 1447 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 NCAPHQ15003 741 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 FLAD1Q8NFF5 587 aa12.56□□□□□ -0.4
TMF1-201ENST00000398559 FTLP02792 175 aaPredicted RBP12.55□□□□□ -0.4
TMF1-201ENST00000398559 SMARCA1P28370 1054 aa12.55□□□□□ -0.4
TMF1-201ENST00000398559 TFDP2Q14188 446 aa12.55□□□□□ -0.4
TMF1-201ENST00000398559 ZNF746Q6NUN9 644 aaPredicted RBP12.55□□□□□ -0.4
TMF1-201ENST00000398559 FAM160B2Q86V87 743 aa12.55□□□□□ -0.4
TMF1-201ENST00000398559 SH3RF3Q8TEJ3 882 aaPredicted RBP12.55□□□□□ -0.4
TMF1-201ENST00000398559 SCG3Q8WXD2 468 aaKnown RBP12.55□□□□□ -0.4
TMF1-201ENST00000398559 MXD3Q9BW11 206 aa12.55□□□□□ -0.4
TMF1-201ENST00000398559 RANBP1P43487 201 aa12.55□□□□□ -0.4
TMF1-201ENST00000398559 PRELPP51888 382 aa12.55□□□□□ -0.4
TMF1-201ENST00000398559 POU5F1BQ06416 359 aa12.55□□□□□ -0.4
TMF1-201ENST00000398559 SZRD1Q7Z422 152 aa12.55□□□□□ -0.4
TMF1-201ENST00000398559 OLFM3Q96PB7 478 aa12.55□□□□□ -0.4
TMF1-201ENST00000398559 FAM187AA6NFU0 413 aa12.55□□□□□ -0.4
TMF1-201ENST00000398559 CYP2D6P10635 497 aa12.55□□□□□ -0.4
TMF1-201ENST00000398559 DRAP1Q14919 205 aaPredicted RBP12.55□□□□□ -0.4
TMF1-201ENST00000398559 IMPG1Q17R60 797 aa12.55□□□□□ -0.4
TMF1-201ENST00000398559 ARHGAP27Q6ZUM4 889 aa12.55□□□□□ -0.4
TMF1-201ENST00000398559 XXYLT1Q8NBI6 393 aa12.55□□□□□ -0.4
TMF1-201ENST00000398559 BEGAINQ9BUH8 593 aa12.55□□□□□ -0.4
TMF1-201ENST00000398559 INTS2Q9H0H0 1204 aaKnown RBP12.55□□□□□ -0.4
TMF1-201ENST00000398559 POLD4Q9HCU8 107 aa12.55□□□□□ -0.4
TMF1-201ENST00000398559 TMEM2Q9UHN6 1383 aa12.55□□□□□ -0.4
TMF1-201ENST00000398559 FGFR4P22455 802 aa12.55□□□□□ -0.4
TMF1-201ENST00000398559 AP3B2Q13367 1082 aa12.55□□□□□ -0.4
TMF1-201ENST00000398559 SMAD1Q15797 465 aaKnown RBP12.55□□□□□ -0.4
TMF1-201ENST00000398559 ZNF699Q32M78 642 aa12.55□□□□□ -0.4
TMF1-201ENST00000398559 CAPRIN2Q6IMN6 1127 aaKnown RBP12.55□□□□□ -0.4
TMF1-201ENST00000398559 ARL8AQ96BM9 186 aa12.55□□□□□ -0.4
TMF1-201ENST00000398559 SPATA17Q96L03 361 aa12.55□□□□□ -0.4
TMF1-201ENST00000398559 FAM213AQ9BRX8 229 aa12.55□□□□□ -0.4
TMF1-201ENST00000398559 STX18Q9P2W9 335 aaKnown RBP12.55□□□□□ -0.4
TMF1-201ENST00000398559 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.55□□□□□ -0.4
TMF1-201ENST00000398559 EDEM3Q9BZQ6 932 aa12.55□□□□□ -0.4
TMF1-201ENST00000398559 WNT8AQ9H1J5 351 aa12.55□□□□□ -0.4
TMF1-201ENST00000398559 PCSK1NQ9UHG2 260 aa12.55□□□□□ -0.4
TMF1-201ENST00000398559 LCMT1Q9UIC8 334 aa12.55□□□□□ -0.4
TMF1-201ENST00000398559 TMEM247A6NEH6 219 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 PCYT1AP49585 367 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 AARSP49588 968 aaKnown RBP eCLIP12.54□□□□□ -0.4
TMF1-201ENST00000398559 KNOP1Q1ED39 458 aaKnown RBP12.54□□□□□ -0.4
TMF1-201ENST00000398559 KIAA1841Q6NSI8 718 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 GCOM2Q9BZD3 368 aaPredicted RBP12.54□□□□□ -0.4
TMF1-201ENST00000398559 GGT7Q9UJ14 662 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 VAMP7P51809 220 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 TTC8Q8TAM2 541 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 COG1Q8WTW3 980 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 C1orf54Q8WWF1 131 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 IFT43Q96FT9 208 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 BRIP1Q9BX63 1249 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 ATP7BP35670 1465 aa12.54□□□□□ -0.4
TMF1-201ENST00000398559 RPAP1Q9BWH6 1393 aaPredicted RBP12.54□□□□□ -0.4
TMF1-201ENST00000398559 TARSL2A2RTX5 802 aaKnown RBP12.54□□□□□ -0.4
TMF1-201ENST00000398559 HSPA9P38646 679 aaKnown RBP12.54□□□□□ -0.4
TMF1-201ENST00000398559 JAK3P52333 1124 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms