RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 ABI1Q8IZP0 508 aa13.57□□□□□ -0.24
TFF3-202ENST00000398431 FEZF2Q8TBJ5 459 aa13.57□□□□□ -0.24
TFF3-202ENST00000398431 BICD2Q8TD16 824 aa13.57□□□□□ -0.24
TFF3-202ENST00000398431 CASP10Q92851 521 aa13.57□□□□□ -0.24
TFF3-202ENST00000398431 SH2D3AQ9BRG2 576 aa13.57□□□□□ -0.24
TFF3-202ENST00000398431 TRAIPQ9BWF2 469 aa13.57□□□□□ -0.24
TFF3-202ENST00000398431 SLC26A6Q9BXS9 759 aa13.57□□□□□ -0.24
TFF3-202ENST00000398431 ADAM7Q9H2U9 754 aa13.57□□□□□ -0.24
TFF3-202ENST00000398431 NCOA5Q9HCD5 579 aaKnown RBP13.57□□□□□ -0.24
TFF3-202ENST00000398431 CYP3A7-CYP3A51PA0A087WV96 503 aa13.56□□□□□ -0.24
TFF3-202ENST00000398431 A0A087WZ62 844 aa13.56□□□□□ -0.24
TFF3-202ENST00000398431 MEIS3P2A8K0S8 358 aa13.56□□□□□ -0.24
TFF3-202ENST00000398431 CHMP2AO43633 222 aa13.56□□□□□ -0.24
TFF3-202ENST00000398431 CXCL14O95715 111 aa13.56□□□□□ -0.24
TFF3-202ENST00000398431 SRGAP2BP0DMP2 458 aa13.56□□□□□ -0.24
TFF3-202ENST00000398431 SP100P23497 879 aaPredicted RBP13.56□□□□□ -0.24
TFF3-202ENST00000398431 CYP3A7P24462 503 aa13.56□□□□□ -0.24
TFF3-202ENST00000398431 PHKA2P46019 1235 aa13.56□□□□□ -0.24
TFF3-202ENST00000398431 JAK3P52333 1124 aa13.56□□□□□ -0.24
TFF3-202ENST00000398431 BCAR1P56945 870 aa13.56□□□□□ -0.24
TFF3-202ENST00000398431 AKAP17AQ02040 695 aaKnown RBP13.56□□□□□ -0.24
TFF3-202ENST00000398431 TBC1D8BQ0IIM8 1120 aa13.56□□□□□ -0.24
TFF3-202ENST00000398431 SMC1AQ14683 1233 aaKnown RBP13.56□□□□□ -0.24
TFF3-202ENST00000398431 NPY5RQ15761 445 aa13.56□□□□□ -0.24
TFF3-202ENST00000398431 Q4G0T1 1027 aa13.56□□□□□ -0.24
TFF3-202ENST00000398431 KANK3Q6NY19 840 aa13.56□□□□□ -0.24
TFF3-202ENST00000398431 CENPQQ7L2Z9 268 aaPredicted RBP13.56□□□□□ -0.24
TFF3-202ENST00000398431 TBCKQ8TEA7 893 aa13.56□□□□□ -0.24
TFF3-202ENST00000398431 RIPOR3Q96MK2 946 aa13.56□□□□□ -0.24
TFF3-202ENST00000398431 MBOAT7Q96N66 472 aa13.56□□□□□ -0.24
TFF3-202ENST00000398431 PRRX2Q99811 253 aa13.56□□□□□ -0.24
TFF3-202ENST00000398431 FDXACB1Q9BRP7 624 aaPredicted RBP13.56□□□□□ -0.24
TFF3-202ENST00000398431 TEKT3Q9BXF9 490 aa13.56□□□□□ -0.24
TFF3-202ENST00000398431 POMKQ9H5K3 350 aa13.56□□□□□ -0.24
TFF3-202ENST00000398431 SH3GLB2Q9NR46 395 aa13.56□□□□□ -0.24
TFF3-202ENST00000398431 CHST12Q9NRB3 414 aa13.56□□□□□ -0.24
TFF3-202ENST00000398431 TSHZ2Q9NRE2 1034 aa13.56□□□□□ -0.24
TFF3-202ENST00000398431 TCEAL9Q9UHQ7 104 aa13.56□□□□□ -0.24
TFF3-202ENST00000398431 C2CD4DB7Z1M9 353 aa13.55□□□□□ -0.24
TFF3-202ENST00000398431 TDP2O95551 362 aa13.55□□□□□ -0.24
TFF3-202ENST00000398431 NLRP5P59047 1200 aa13.55□□□□□ -0.24
TFF3-202ENST00000398431 TOB2Q14106 344 aaPredicted RBP13.55□□□□□ -0.24
TFF3-202ENST00000398431 MTERF2Q49AM1 385 aa13.55□□□□□ -0.24
TFF3-202ENST00000398431 XKR3Q5GH77 459 aa13.55□□□□□ -0.24
TFF3-202ENST00000398431 MIER3Q7Z3K6 550 aa13.55□□□□□ -0.24
TFF3-202ENST00000398431 C12orf76Q8N812 135 aaPredicted RBP13.55□□□□□ -0.24
TFF3-202ENST00000398431 CCDC148Q8NFR7 591 aa13.55□□□□□ -0.24
TFF3-202ENST00000398431 RDM1Q8NG50 284 aa13.55□□□□□ -0.24
TFF3-202ENST00000398431 SLC22A17Q8WUG5 538 aa13.55□□□□□ -0.24
TFF3-202ENST00000398431 BCL7CQ8WUZ0 217 aaPredicted RBP13.55□□□□□ -0.24
TFF3-202ENST00000398431 NLRP7Q8WX94 980 aa13.55□□□□□ -0.24
TFF3-202ENST00000398431 AUTS2Q8WXX7 1259 aa13.55□□□□□ -0.24
TFF3-202ENST00000398431 LPPQ93052 612 aa13.55□□□□□ -0.24
TFF3-202ENST00000398431 GCOM2Q9BZD3 368 aaPredicted RBP13.55□□□□□ -0.24
TFF3-202ENST00000398431 ZBP1Q9H171 429 aa13.55□□□□□ -0.24
TFF3-202ENST00000398431 NRDE2Q9H7Z3 1164 aa13.55□□□□□ -0.24
TFF3-202ENST00000398431 DACT1Q9NYF0 836 aa13.55□□□□□ -0.24
TFF3-202ENST00000398431 IRAK3Q9Y616 596 aa13.55□□□□□ -0.24
TFF3-202ENST00000398431 EML1O00423 815 aa13.54□□□□□ -0.24
TFF3-202ENST00000398431 B4GALT3O60512 393 aa13.54□□□□□ -0.24
TFF3-202ENST00000398431 ZNF623O75123 536 aa13.54□□□□□ -0.24
TFF3-202ENST00000398431 MAFO75444 373 aaPredicted RBP13.54□□□□□ -0.24
TFF3-202ENST00000398431 OFD1O75665 1012 aa13.54□□□□□ -0.24
TFF3-202ENST00000398431 BRD1O95696 1058 aa13.54□□□□□ -0.24
TFF3-202ENST00000398431 GALTP07902 379 aa13.54□□□□□ -0.24
TFF3-202ENST00000398431 WEE2P0C1S8 567 aa13.54□□□□□ -0.24
TFF3-202ENST00000398431 ALDH7A1P49419 539 aaKnown RBP13.54□□□□□ -0.24
TFF3-202ENST00000398431 CDC42EP1Q00587 391 aa13.54□□□□□ -0.24
TFF3-202ENST00000398431 ITIH3Q06033 890 aa13.54□□□□□ -0.24
TFF3-202ENST00000398431 LONRF3Q496Y0 759 aa13.54□□□□□ -0.24
TFF3-202ENST00000398431 TPRNQ4KMQ1 711 aa13.54□□□□□ -0.24
TFF3-202ENST00000398431 ANO5Q75V66 913 aa13.54□□□□□ -0.24
TFF3-202ENST00000398431 KSR1Q8IVT5 923 aa13.54□□□□□ -0.24
TFF3-202ENST00000398431 VPS52Q8N1B4 723 aa13.54□□□□□ -0.24
TFF3-202ENST00000398431 KREMEN2Q8NCW0 462 aa13.54□□□□□ -0.24
TFF3-202ENST00000398431 ETNPPLQ8TBG4 499 aa13.54□□□□□ -0.24
TFF3-202ENST00000398431 VN1R3Q9BXE9 311 aa13.54□□□□□ -0.24
TFF3-202ENST00000398431 MRPL9Q9BYD2 267 aaKnown RBP13.54□□□□□ -0.24
TFF3-202ENST00000398431 SMOC2Q9H3U7 446 aa13.54□□□□□ -0.24
TFF3-202ENST00000398431 TBC1D13Q9NVG8 400 aa13.54□□□□□ -0.24
TFF3-202ENST00000398431 PPP4R2Q9NY27 417 aa13.54□□□□□ -0.24
TFF3-202ENST00000398431 SEPT9Q9UHD8 586 aaPredicted RBP13.54□□□□□ -0.24
TFF3-202ENST00000398431 PCDHA4Q9UN74 947 aa13.54□□□□□ -0.24
TFF3-202ENST00000398431 CACNA1HO95180 2353 aa13.54□□□□□ -0.24
TFF3-202ENST00000398431 DDX11L8A8MPP1 907 aa13.53□□□□□ -0.24
TFF3-202ENST00000398431 CTSAP10619 480 aa13.53□□□□□ -0.24
TFF3-202ENST00000398431 EPCAMP16422 314 aa13.53□□□□□ -0.24
TFF3-202ENST00000398431 AFF1P51825 1210 aaKnown RBP13.53□□□□□ -0.24
TFF3-202ENST00000398431 CES5AQ6NT32 575 aa13.53□□□□□ -0.24
TFF3-202ENST00000398431 DDX53Q86TM3 631 aaKnown RBP13.53□□□□□ -0.24
TFF3-202ENST00000398431 ZNF579Q8NAF0 562 aaKnown RBP13.53□□□□□ -0.24
TFF3-202ENST00000398431 IGSF21Q96ID5 467 aa13.53□□□□□ -0.24
TFF3-202ENST00000398431 SCLT1Q96NL6 688 aa13.53□□□□□ -0.24
TFF3-202ENST00000398431 AIFM3Q96NN9 605 aa13.53□□□□□ -0.24
TFF3-202ENST00000398431 NECTIN4Q96NY8 510 aa13.53□□□□□ -0.24
TFF3-202ENST00000398431 LARP6Q9BRS8 491 aaKnown RBP13.53□□□□□ -0.24
TFF3-202ENST00000398431 IFT122Q9HBG6 1241 aa13.53□□□□□ -0.24
TFF3-202ENST00000398431 ZSWIM6Q9HCJ5 1215 aa13.53□□□□□ -0.24
TFF3-202ENST00000398431 FAM105AQ9NUU6 356 aa13.53□□□□□ -0.24
TFF3-202ENST00000398431 FAM86C1Q9NVL1 165 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms