RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 XKR9Q5GH70 373 aa28.31■■■□□ 2.12
U2AF1-203ENST00000398137 AXDND1Q5T1B0 1012 aaPredicted RBP28.31■■■□□ 2.12
U2AF1-203ENST00000398137 IER5Q5VY09 327 aa28.31■■■□□ 2.12
U2AF1-203ENST00000398137 OTUD6AQ7L8S5 288 aa28.31■■■□□ 2.12
U2AF1-203ENST00000398137 KIAA0319LQ8IZA0 1049 aa28.31■■■□□ 2.12
U2AF1-203ENST00000398137 RASSF8Q8NHQ8 419 aa28.31■■■□□ 2.12
U2AF1-203ENST00000398137 CEP170P1Q96L14 293 aa28.31■■■□□ 2.12
U2AF1-203ENST00000398137 CCDC43Q96MW1 224 aaKnown RBP28.31■■■□□ 2.12
U2AF1-203ENST00000398137 NACC1Q96RE7 527 aa28.31■■■□□ 2.12
U2AF1-203ENST00000398137 CELF4Q9BZC1 486 aaKnown RBP28.31■■■□□ 2.12
U2AF1-203ENST00000398137 CDHR5Q9HBB8 845 aa28.31■■■□□ 2.12
U2AF1-203ENST00000398137 LMCD1Q9NZU5 365 aa28.31■■■□□ 2.12
U2AF1-203ENST00000398137 SQORQ9Y6N5 450 aa28.31■■■□□ 2.12
U2AF1-203ENST00000398137 TCF20Q9UGU0 1960 aaKnown RBP28.3■■■□□ 2.12
U2AF1-203ENST00000398137 ARID2Q68CP9 1835 aa28.3■■■□□ 2.12
U2AF1-203ENST00000398137 RPLP2P05387 115 aaKnown RBP28.3■■■□□ 2.12
U2AF1-203ENST00000398137 KARSQ15046 597 aaKnown RBP28.3■■■□□ 2.12
U2AF1-203ENST00000398137 TMEM119Q4V9L6 283 aa28.3■■■□□ 2.12
U2AF1-203ENST00000398137 HYIQ5T013 277 aa28.3■■■□□ 2.12
U2AF1-203ENST00000398137 CEP89Q96ST8 783 aa28.3■■■□□ 2.12
U2AF1-203ENST00000398137 ANKEF1Q9NU02 776 aa28.3■■■□□ 2.12
U2AF1-203ENST00000398137 ATG2AQ2TAZ0 1938 aa28.3■■■□□ 2.12
U2AF1-203ENST00000398137 TBC1D8BQ0IIM8 1120 aa28.29■■■□□ 2.12
U2AF1-203ENST00000398137 EPC2Q52LR7 807 aa28.29■■■□□ 2.12
U2AF1-203ENST00000398137 KCNK18Q7Z418 384 aa28.29■■■□□ 2.12
U2AF1-203ENST00000398137 FBXO22Q8NEZ5 403 aa28.29■■■□□ 2.12
U2AF1-203ENST00000398137 CALML4Q96GE6 196 aa28.29■■■□□ 2.12
U2AF1-203ENST00000398137 CCSER1Q9C0I3 900 aa28.29■■■□□ 2.12
U2AF1-203ENST00000398137 TMX1Q9H3N1 280 aa28.29■■■□□ 2.12
U2AF1-203ENST00000398137 PADI3Q9ULW8 664 aa28.29■■■□□ 2.12
U2AF1-203ENST00000398137 SLC26A4O43511 780 aa28.28■■■□□ 2.12
U2AF1-203ENST00000398137 TXLNAP40222 546 aa28.28■■■□□ 2.12
U2AF1-203ENST00000398137 RARRES1P49788 294 aa28.28■■■□□ 2.12
U2AF1-203ENST00000398137 SHC4Q6S5L8 630 aa28.28■■■□□ 2.12
U2AF1-203ENST00000398137 NME8Q8N427 588 aa28.28■■■□□ 2.12
U2AF1-203ENST00000398137 TMEM40Q8WWA1 233 aa28.28■■■□□ 2.12
U2AF1-203ENST00000398137 ZNF689Q96CS4 500 aaPredicted RBP28.28■■■□□ 2.12
U2AF1-203ENST00000398137 NT5C3AQ9H0P0 336 aa28.28■■■□□ 2.12
U2AF1-203ENST00000398137 BMP2KQ9NSY1 1161 aaPredicted RBP28.28■■■□□ 2.12
U2AF1-203ENST00000398137 DBR1Q9UK59 544 aaKnown RBP28.28■■■□□ 2.12
U2AF1-203ENST00000398137 E9PMD0 336 aa28.27■■■□□ 2.12
U2AF1-203ENST00000398137 BMP1P13497 986 aa28.27■■■□□ 2.12
U2AF1-203ENST00000398137 PLCG1P19174 1290 aa28.27■■■□□ 2.12
U2AF1-203ENST00000398137 KCNQ1P51787 676 aa28.27■■■□□ 2.12
U2AF1-203ENST00000398137 SKIV2LQ15477 1246 aaKnown RBP28.27■■■□□ 2.12
U2AF1-203ENST00000398137 ARHGEF35A5YM69 484 aa28.26■■■□□ 2.11
U2AF1-203ENST00000398137 MAGEB2O15479 319 aa28.26■■■□□ 2.11
U2AF1-203ENST00000398137 XRCC6P12956 609 aaKnown RBP eCLIP28.26■■■□□ 2.11
U2AF1-203ENST00000398137 POLGP54098 1239 aaPredicted RBP28.26■■■□□ 2.11
U2AF1-203ENST00000398137 TMEM192Q8IY95 271 aa28.26■■■□□ 2.11
U2AF1-203ENST00000398137 LRRC71Q8N4P6 559 aa28.26■■■□□ 2.11
U2AF1-203ENST00000398137 METTL13Q8N6R0 699 aa28.26■■■□□ 2.11
U2AF1-203ENST00000398137 BHMT2Q9H2M3 363 aa28.26■■■□□ 2.11
U2AF1-203ENST00000398137 DNM3Q9UQ16 869 aa28.26■■■□□ 2.11
U2AF1-203ENST00000398137 PPME1Q9Y570 386 aa28.26■■■□□ 2.11
U2AF1-203ENST00000398137 BRWD1Q9NSI6 2320 aa28.26■■■□□ 2.11
U2AF1-203ENST00000398137 KIAA1671Q9BY89 1806 aa28.25■■■□□ 2.11
U2AF1-203ENST00000398137 USO1O60763 962 aaKnown RBP28.25■■■□□ 2.11
U2AF1-203ENST00000398137 RFC5P40937 340 aa28.25■■■□□ 2.11
U2AF1-203ENST00000398137 CLCN3P51790 818 aa28.25■■■□□ 2.11
U2AF1-203ENST00000398137 TPRNQ4KMQ1 711 aa28.25■■■□□ 2.11
U2AF1-203ENST00000398137 LINC01465Q8N7H1 131 aa28.25■■■□□ 2.11
U2AF1-203ENST00000398137 ADAMTS19Q8TE59 1207 aa28.25■■■□□ 2.11
U2AF1-203ENST00000398137 LRRC15Q8TF66 581 aa28.25■■■□□ 2.11
U2AF1-203ENST00000398137 TSPYL2Q9H2G4 693 aaPredicted RBP28.25■■■□□ 2.11
U2AF1-203ENST00000398137 ADGRA3Q8IWK6 1321 aa28.24■■■□□ 2.11
U2AF1-203ENST00000398137 H3BNC9 293 aa28.24■■■□□ 2.11
U2AF1-203ENST00000398137 M0QZ92 97 aa28.24■■■□□ 2.11
U2AF1-203ENST00000398137 MGEA5O60502 916 aa28.24■■■□□ 2.11
U2AF1-203ENST00000398137 MAFO75444 373 aaPredicted RBP28.24■■■□□ 2.11
U2AF1-203ENST00000398137 DGKIO75912 1065 aa28.24■■■□□ 2.11
U2AF1-203ENST00000398137 EYA4O95677 639 aa28.24■■■□□ 2.11
U2AF1-203ENST00000398137 EMC2Q15006 297 aa28.24■■■□□ 2.11
U2AF1-203ENST00000398137 RESP18Q5W5W9 173 aa28.24■■■□□ 2.11
U2AF1-203ENST00000398137 EFCAB12Q6NXP0 572 aa28.24■■■□□ 2.11
U2AF1-203ENST00000398137 SLC7A3Q8WY07 619 aa28.24■■■□□ 2.11
U2AF1-203ENST00000398137 SAMD11Q96NU1 681 aa28.24■■■□□ 2.11
U2AF1-203ENST00000398137 ERVK-5Q9HDB9 667 aa28.24■■■□□ 2.11
U2AF1-203ENST00000398137 CCDC39Q9UFE4 941 aa28.24■■■□□ 2.11
U2AF1-203ENST00000398137 NOC2LQ9Y3T9 749 aaKnown RBP28.24■■■□□ 2.11
U2AF1-203ENST00000398137 A0A087X0B3 334 aa28.23■■■□□ 2.11
U2AF1-203ENST00000398137 PAK2Q13177 524 aa28.23■■■□□ 2.11
U2AF1-203ENST00000398137 PANK2Q9BZ23 570 aa28.23■■■□□ 2.11
U2AF1-203ENST00000398137 DHX33Q9H6R0 707 aaKnown RBP28.23■■■□□ 2.11
U2AF1-203ENST00000398137 GPR32O75388 356 aa28.22■■■□□ 2.11
U2AF1-203ENST00000398137 SSBP05455 408 aaKnown RBP eCLIP28.22■■■□□ 2.11
U2AF1-203ENST00000398137 DRP2Q13474 957 aa28.22■■■□□ 2.11
U2AF1-203ENST00000398137 PADI6Q6TGC4 694 aa28.22■■■□□ 2.11
U2AF1-203ENST00000398137 FIBCD1Q8N539 461 aa28.22■■■□□ 2.11
U2AF1-203ENST00000398137 PDILTQ8N807 584 aa28.22■■■□□ 2.11
U2AF1-203ENST00000398137 NECAB3Q96P71 396 aaPredicted RBP28.22■■■□□ 2.11
U2AF1-203ENST00000398137 PPP1R16BQ96T49 567 aa28.22■■■□□ 2.11
U2AF1-203ENST00000398137 JPH2Q9BR39 696 aaPredicted RBP28.22■■■□□ 2.11
U2AF1-203ENST00000398137 FTHL17Q9BXU8 183 aa28.22■■■□□ 2.11
U2AF1-203ENST00000398137 ATP6V0A4Q9HBG4 840 aa28.22■■■□□ 2.11
U2AF1-203ENST00000398137 BLOC1S4Q9NUP1 217 aa28.22■■■□□ 2.11
U2AF1-203ENST00000398137 COG5Q9UP83 839 aa28.22■■■□□ 2.11
U2AF1-203ENST00000398137 GINS2Q9Y248 185 aa28.22■■■□□ 2.11
U2AF1-203ENST00000398137 IGKV6-21A0A0C4DH24 114 aa28.21■■■□□ 2.11
U2AF1-203ENST00000398137 C5orf67F2Z3F1 127 aa28.21■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms