RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 ZNF410Q86VK4 478 aa28.13■■■□□ 2.09
TMEM55B-202ENST00000398020 TDHQ8IZJ6 230 aa28.13■■■□□ 2.09
TMEM55B-202ENST00000398020 BSNDQ8WZ55 320 aa28.13■■■□□ 2.09
TMEM55B-202ENST00000398020 DHX58Q96C10 678 aa28.13■■■□□ 2.09
TMEM55B-202ENST00000398020 GCOM2Q9BZD3 368 aaPredicted RBP28.13■■■□□ 2.09
TMEM55B-202ENST00000398020 IFT122Q9HBG6 1241 aa28.13■■■□□ 2.09
TMEM55B-202ENST00000398020 A0A1B0GVL5 298 aa28.12■■■□□ 2.09
TMEM55B-202ENST00000398020 ASAP2O43150 1006 aa28.12■■■□□ 2.09
TMEM55B-202ENST00000398020 FAM228AQ86W67 206 aa28.12■■■□□ 2.09
TMEM55B-202ENST00000398020 DAW1Q8N136 415 aa28.12■■■□□ 2.09
TMEM55B-202ENST00000398020 ZNF710Q8N1W2 664 aa28.12■■■□□ 2.09
TMEM55B-202ENST00000398020 USP38Q8NB14 1042 aa28.12■■■□□ 2.09
TMEM55B-202ENST00000398020 RNPC3Q96LT9 517 aaKnown RBP28.12■■■□□ 2.09
TMEM55B-202ENST00000398020 SQORQ9Y6N5 450 aa28.12■■■□□ 2.09
TMEM55B-202ENST00000398020 POLR2DO15514 142 aaKnown RBP28.11■■■□□ 2.09
TMEM55B-202ENST00000398020 ACTN1P12814 892 aa28.11■■■□□ 2.09
TMEM55B-202ENST00000398020 E2F4Q16254 413 aa28.11■■■□□ 2.09
TMEM55B-202ENST00000398020 ST3GAL5Q9UNP4 418 aa28.11■■■□□ 2.09
TMEM55B-202ENST00000398020 SFI1A8K8P3 1242 aa28.1■■■□□ 2.09
TMEM55B-202ENST00000398020 PFKFB1P16118 471 aa28.1■■■□□ 2.09
TMEM55B-202ENST00000398020 CMA1P23946 247 aa28.1■■■□□ 2.09
TMEM55B-202ENST00000398020 GUCY2CP25092 1073 aa28.1■■■□□ 2.09
TMEM55B-202ENST00000398020 HERVK_113Q902F9 699 aa28.1■■■□□ 2.09
TMEM55B-202ENST00000398020 MINDY3Q9H8M7 445 aa28.1■■■□□ 2.09
TMEM55B-202ENST00000398020 KCNH3Q9ULD8 1083 aa28.1■■■□□ 2.09
TMEM55B-202ENST00000398020 TRIOBPQ9H2D6 2365 aa28.1■■■□□ 2.09
TMEM55B-202ENST00000398020 LRRIQ4A6NIV6 560 aa28.1■■■□□ 2.09
TMEM55B-202ENST00000398020 MAPK7Q13164 816 aa28.1■■■□□ 2.09
TMEM55B-202ENST00000398020 IKBKEQ14164 716 aa28.1■■■□□ 2.09
TMEM55B-202ENST00000398020 TFDP1Q14186 410 aa28.1■■■□□ 2.09
TMEM55B-202ENST00000398020 STAMQ92783 540 aa28.1■■■□□ 2.09
TMEM55B-202ENST00000398020 KIFAP3Q92845 792 aa28.1■■■□□ 2.09
TMEM55B-202ENST00000398020 ERVK-5Q9HDB9 667 aa28.1■■■□□ 2.09
TMEM55B-202ENST00000398020 SV2BQ7L1I2 683 aa28.09■■■□□ 2.09
TMEM55B-202ENST00000398020 REEP2Q9BRK0 252 aa28.09■■■□□ 2.09
TMEM55B-202ENST00000398020 KCND2Q9NZV8 630 aa28.09■■■□□ 2.09
TMEM55B-202ENST00000398020 KRT18P05783 430 aaKnown RBP28.08■■■□□ 2.09
TMEM55B-202ENST00000398020 PHKA2P46019 1235 aa28.08■■■□□ 2.09
TMEM55B-202ENST00000398020 IQUBQ8NA54 791 aa28.08■■■□□ 2.09
TMEM55B-202ENST00000398020 APBB2Q92870 758 aa28.08■■■□□ 2.09
TMEM55B-202ENST00000398020 KIFC3Q9BVG8 833 aa28.08■■■□□ 2.09
TMEM55B-202ENST00000398020 TMX1Q9H3N1 280 aa28.08■■■□□ 2.09
TMEM55B-202ENST00000398020 GPR182O15218 404 aa28.07■■■□□ 2.08
TMEM55B-202ENST00000398020 DYMQ7RTS9 669 aa28.07■■■□□ 2.08
TMEM55B-202ENST00000398020 FSIP1Q8NA03 581 aa28.07■■■□□ 2.08
TMEM55B-202ENST00000398020 DRC1Q96MC2 740 aa28.07■■■□□ 2.08
TMEM55B-202ENST00000398020 GOLPH3LQ9H4A5 285 aa28.07■■■□□ 2.08
TMEM55B-202ENST00000398020 A0A1W2PQ27 194 aa28.07■■■□□ 2.08
TMEM55B-202ENST00000398020 A0A1W2PQ64 194 aa28.07■■■□□ 2.08
TMEM55B-202ENST00000398020 A0A1W2PQD8 194 aa28.07■■■□□ 2.08
TMEM55B-202ENST00000398020 NDUFA8P51970 172 aa28.07■■■□□ 2.08
TMEM55B-202ENST00000398020 PEX3P56589 373 aa28.07■■■□□ 2.08
TMEM55B-202ENST00000398020 PTENP60484 403 aa28.07■■■□□ 2.08
TMEM55B-202ENST00000398020 RASIP1Q5U651 963 aa28.07■■■□□ 2.08
TMEM55B-202ENST00000398020 IFT74Q96LB3 600 aa28.07■■■□□ 2.08
TMEM55B-202ENST00000398020 TIPINQ9BVW5 301 aa28.07■■■□□ 2.08
TMEM55B-202ENST00000398020 HPSEQ9Y251 543 aa28.07■■■□□ 2.08
TMEM55B-202ENST00000398020 MICAL3Q7RTP6 2002 aa28.06■■■□□ 2.08
TMEM55B-202ENST00000398020 ABHD14A-ACY1A0A1B0GW23 586 aa28.06■■■□□ 2.08
TMEM55B-202ENST00000398020 GOLGA6L4A6NEF3 574 aa28.06■■■□□ 2.08
TMEM55B-202ENST00000398020 MYMKA6NI61 221 aa28.06■■■□□ 2.08
TMEM55B-202ENST00000398020 BAIAP3O94812 1187 aa28.06■■■□□ 2.08
TMEM55B-202ENST00000398020 WDR5P61964 334 aaKnown RBP28.06■■■□□ 2.08
TMEM55B-202ENST00000398020 GIT2Q14161 759 aa28.06■■■□□ 2.08
TMEM55B-202ENST00000398020 LIN28BQ6ZN17 250 aaKnown RBP eCLIP28.06■■■□□ 2.08
TMEM55B-202ENST00000398020 MRPS27Q92552 414 aaKnown RBP28.06■■■□□ 2.08
TMEM55B-202ENST00000398020 INO80BQ9C086 356 aaPredicted RBP28.06■■■□□ 2.08
TMEM55B-202ENST00000398020 MTIF3Q9H2K0 278 aaKnown RBP28.06■■■□□ 2.08
TMEM55B-202ENST00000398020 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.05■■■□□ 2.08
TMEM55B-202ENST00000398020 INO80B-WBP1J3KQ70 363 aa28.05■■■□□ 2.08
TMEM55B-202ENST00000398020 MGEA5O60502 916 aa28.05■■■□□ 2.08
TMEM55B-202ENST00000398020 SFPQP23246 707 aaKnown RBP eCLIP28.05■■■□□ 2.08
TMEM55B-202ENST00000398020 NAMPTP43490 491 aa28.05■■■□□ 2.08
TMEM55B-202ENST00000398020 DEFB103AP81534 67 aa28.05■■■□□ 2.08
TMEM55B-202ENST00000398020 CATSPER4Q7RTX7 472 aa28.05■■■□□ 2.08
TMEM55B-202ENST00000398020 SRGAP1Q7Z6B7 1085 aa28.05■■■□□ 2.08
TMEM55B-202ENST00000398020 TMCO2Q7Z6W1 182 aaPredicted RBP28.05■■■□□ 2.08
TMEM55B-202ENST00000398020 LINC01599Q8WXQ3 324 aa28.05■■■□□ 2.08
TMEM55B-202ENST00000398020 DDX12PQ92771 950 aa28.05■■■□□ 2.08
TMEM55B-202ENST00000398020 SLC4A7Q9Y6M7 1214 aa28.05■■■□□ 2.08
TMEM55B-202ENST00000398020 ADGRA3Q8IWK6 1321 aa28.05■■■□□ 2.08
TMEM55B-202ENST00000398020 MYH11P35749 1972 aa28.04■■■□□ 2.08
TMEM55B-202ENST00000398020 LOC101059915A0A1B0GWI6 518 aaPredicted RBP28.04■■■□□ 2.08
TMEM55B-202ENST00000398020 CCDC169A6NNP5 214 aa28.04■■■□□ 2.08
TMEM55B-202ENST00000398020 KCNJ6P48051 423 aa28.04■■■□□ 2.08
TMEM55B-202ENST00000398020 PPP2R5AQ15172 486 aa28.04■■■□□ 2.08
TMEM55B-202ENST00000398020 FAM109BQ6ICB4 259 aaPredicted RBP28.04■■■□□ 2.08
TMEM55B-202ENST00000398020 RTN4RL1Q86UN2 441 aaPredicted RBP28.04■■■□□ 2.08
TMEM55B-202ENST00000398020 DEPTORQ8TB45 409 aa28.04■■■□□ 2.08
TMEM55B-202ENST00000398020 ZHX3Q9H4I2 956 aa28.04■■■□□ 2.08
TMEM55B-202ENST00000398020 SERTAD1Q9UHV2 236 aa28.04■■■□□ 2.08
TMEM55B-202ENST00000398020 NPTX2P47972 431 aa28.03■■■□□ 2.08
TMEM55B-202ENST00000398020 MBTD1Q05BQ5 628 aa28.03■■■□□ 2.08
TMEM55B-202ENST00000398020 POU5F1BQ06416 359 aa28.03■■■□□ 2.08
TMEM55B-202ENST00000398020 ODR4Q5SWX8 454 aa28.03■■■□□ 2.08
TMEM55B-202ENST00000398020 CUEDC2Q9H467 287 aa28.03■■■□□ 2.08
TMEM55B-202ENST00000398020 ODF2LQ9ULJ1 636 aa28.03■■■□□ 2.08
TMEM55B-202ENST00000398020 LIG1P18858 919 aa28.03■■■□□ 2.08
TMEM55B-202ENST00000398020 IBSPP21815 317 aaPredicted RBP28.03■■■□□ 2.08
TMEM55B-202ENST00000398020 SYKP43405 635 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms