RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 CAPSQ13938 189 aa23.51■■□□□ 1.35
TSPAN4-206ENST00000397408 CHAMP1Q96JM3 812 aa23.51■■□□□ 1.35
TSPAN4-206ENST00000397408 RUSC1Q9BVN2 902 aa23.51■■□□□ 1.35
TSPAN4-206ENST00000397408 PBX4Q9BYU1 374 aa23.51■■□□□ 1.35
TSPAN4-206ENST00000397408 IFT122Q9HBG6 1241 aa23.51■■□□□ 1.35
TSPAN4-206ENST00000397408 ATP6V1DQ9Y5K8 247 aa23.51■■□□□ 1.35
TSPAN4-206ENST00000397408 PLA2G4BP0C869 781 aa23.5■■□□□ 1.35
TSPAN4-206ENST00000397408 SFPQP23246 707 aaKnown RBP eCLIP23.5■■□□□ 1.352e-6■■■■□ 23.9
TSPAN4-206ENST00000397408 PBX2P40425 430 aa23.5■■□□□ 1.35
TSPAN4-206ENST00000397408 NUCB2P80303 420 aa23.5■■□□□ 1.35
TSPAN4-206ENST00000397408 TFDP1Q14186 410 aa23.5■■□□□ 1.35
TSPAN4-206ENST00000397408 LRRC15Q8TF66 581 aa23.5■■□□□ 1.35
TSPAN4-206ENST00000397408 INO80BQ9C086 356 aaPredicted RBP23.5■■□□□ 1.35
TSPAN4-206ENST00000397408 GBF1Q92538 1859 aa23.5■■□□□ 1.35
TSPAN4-206ENST00000397408 ENPP3O14638 875 aa23.5■■□□□ 1.35
TSPAN4-206ENST00000397408 MGEA5O60502 916 aa23.5■■□□□ 1.35
TSPAN4-206ENST00000397408 DNAJB2P25686 324 aa23.5■■□□□ 1.35
TSPAN4-206ENST00000397408 PHKA2P46019 1235 aa23.5■■□□□ 1.35
TSPAN4-206ENST00000397408 KRT85P78386 507 aa23.5■■□□□ 1.35
TSPAN4-206ENST00000397408 RINT1Q6NUQ1 792 aa23.5■■□□□ 1.35
TSPAN4-206ENST00000397408 FAM117BQ6P1L5 589 aa23.5■■□□□ 1.35
TSPAN4-206ENST00000397408 SYT2Q8N9I0 419 aaPredicted RBP23.5■■□□□ 1.35
TSPAN4-206ENST00000397408 TSPYL2Q9H2G4 693 aaPredicted RBP23.5■■□□□ 1.35
TSPAN4-206ENST00000397408 CCDC39Q9UFE4 941 aa23.5■■□□□ 1.35
TSPAN4-206ENST00000397408 DENND3A2RUS2 1198 aa23.49■■□□□ 1.35
TSPAN4-206ENST00000397408 CUTAO60888 179 aa23.49■■□□□ 1.35
TSPAN4-206ENST00000397408 ME1P48163 572 aa23.49■■□□□ 1.35
TSPAN4-206ENST00000397408 SLC12A3P55017 1021 aa23.49■■□□□ 1.35
TSPAN4-206ENST00000397408 RAB30Q15771 203 aa23.49■■□□□ 1.35
TSPAN4-206ENST00000397408 SRGAP1Q7Z6B7 1085 aa23.49■■□□□ 1.35
TSPAN4-206ENST00000397408 RTN4RL1Q86UN2 441 aaPredicted RBP23.49■■□□□ 1.35
TSPAN4-206ENST00000397408 ADAM2Q99965 735 aa23.49■■□□□ 1.35
TSPAN4-206ENST00000397408 ZBED2Q9BTP6 218 aa23.49■■□□□ 1.35
TSPAN4-206ENST00000397408 POLD4Q9HCU8 107 aa23.49■■□□□ 1.35
TSPAN4-206ENST00000397408 BLOC1S4Q9NUP1 217 aa23.49■■□□□ 1.35
TSPAN4-206ENST00000397408 MSRAQ9UJ68 235 aa23.49■■□□□ 1.35
TSPAN4-206ENST00000397408 LRRIQ4A6NIV6 560 aa23.48■■□□□ 1.35
TSPAN4-206ENST00000397408 GJB5O95377 273 aa23.48■■□□□ 1.35
TSPAN4-206ENST00000397408 C1orf186Q6ZWK4 172 aa23.48■■□□□ 1.35
TSPAN4-206ENST00000397408 CATSPER4Q7RTX7 472 aa23.48■■□□□ 1.35
TSPAN4-206ENST00000397408 BSNDQ8WZ55 320 aa23.48■■□□□ 1.35
TSPAN4-206ENST00000397408 RAD54LQ92698 747 aa23.48■■□□□ 1.35
TSPAN4-206ENST00000397408 KIFAP3Q92845 792 aa23.48■■□□□ 1.35
TSPAN4-206ENST00000397408 MINDY3Q9H8M7 445 aa23.48■■□□□ 1.35
TSPAN4-206ENST00000397408 RCOR1Q9UKL0 485 aa23.48■■□□□ 1.35
TSPAN4-206ENST00000397408 YBX2Q9Y2T7 364 aaKnown RBP23.48■■□□□ 1.35
TSPAN4-206ENST00000397408 PCDHA11Q9Y5I1 949 aa23.48■■□□□ 1.35
TSPAN4-206ENST00000397408 TTC3P53804 2025 aa23.47■■□□□ 1.35
TSPAN4-206ENST00000397408 TLL1O43897 1013 aa23.47■■□□□ 1.35
TSPAN4-206ENST00000397408 HIP1RO75146 1068 aa23.47■■□□□ 1.35
TSPAN4-206ENST00000397408 UPP2O95045 317 aa23.47■■□□□ 1.35
TSPAN4-206ENST00000397408 MYOGP15173 224 aa23.47■■□□□ 1.35
TSPAN4-206ENST00000397408 PTENP60484 403 aa23.47■■□□□ 1.35
TSPAN4-206ENST00000397408 POU5F1BQ06416 359 aa23.47■■□□□ 1.35
TSPAN4-206ENST00000397408 DHX8Q14562 1220 aaKnown RBP23.47■■□□□ 1.35
TSPAN4-206ENST00000397408 MCM6Q14566 821 aa23.47■■□□□ 1.35
TSPAN4-206ENST00000397408 AXDND1Q5T1B0 1012 aaPredicted RBP23.47■■□□□ 1.35
TSPAN4-206ENST00000397408 FAM43BQ6ZT52 329 aaPredicted RBP23.47■■□□□ 1.35
TSPAN4-206ENST00000397408 TOP1MTQ969P6 601 aa23.47■■□□□ 1.35
TSPAN4-206ENST00000397408 TIFAQ96CG3 184 aa23.47■■□□□ 1.35
TSPAN4-206ENST00000397408 INO80B-WBP1J3KQ70 363 aa23.46■■□□□ 1.35
TSPAN4-206ENST00000397408 IBSPP21815 317 aaPredicted RBP23.46■■□□□ 1.35
TSPAN4-206ENST00000397408 GUCY2CP25092 1073 aa23.46■■□□□ 1.35
TSPAN4-206ENST00000397408 RAD51AP2Q09MP3 1159 aa23.46■■□□□ 1.35
TSPAN4-206ENST00000397408 DSC3Q14574 896 aa23.46■■□□□ 1.35
TSPAN4-206ENST00000397408 RRAGBQ5VZM2 374 aa23.46■■□□□ 1.35
TSPAN4-206ENST00000397408 IFNLR1Q8IU57 520 aaPredicted RBP23.46■■□□□ 1.35
TSPAN4-206ENST00000397408 LARP4BQ92615 738 aaKnown RBP23.46■■□□□ 1.35
TSPAN4-206ENST00000397408 NKX2-4Q9H2Z4 354 aa23.46■■□□□ 1.35
TSPAN4-206ENST00000397408 RGS18Q9NS28 235 aa23.46■■□□□ 1.35
TSPAN4-206ENST00000397408 C1orf112Q9NSG2 853 aa23.46■■□□□ 1.35
TSPAN4-206ENST00000397408 STK17AQ9UEE5 414 aa23.46■■□□□ 1.35
TSPAN4-206ENST00000397408 PCDHA7Q9UN72 937 aa23.46■■□□□ 1.35
TSPAN4-206ENST00000397408 SZT2Q5T011 3432 aa23.46■■□□□ 1.35
TSPAN4-206ENST00000397408 ZSCAN20P17040 1043 aaPredicted RBP23.45■■□□□ 1.34
TSPAN4-206ENST00000397408 NAMPTP43490 491 aa23.45■■□□□ 1.34
TSPAN4-206ENST00000397408 PPP2R5AQ15172 486 aa23.45■■□□□ 1.34
TSPAN4-206ENST00000397408 GPR153Q6NV75 609 aa23.45■■□□□ 1.34
TSPAN4-206ENST00000397408 SHC4Q6S5L8 630 aa23.45■■□□□ 1.34
TSPAN4-206ENST00000397408 GPBP1Q86WP2 473 aa23.45■■□□□ 1.34
TSPAN4-206ENST00000397408 DAW1Q8N136 415 aa23.45■■□□□ 1.34
TSPAN4-206ENST00000397408 LEO1Q8WVC0 666 aaPredicted RBP23.45■■□□□ 1.34
TSPAN4-206ENST00000397408 IFT74Q96LB3 600 aa23.45■■□□□ 1.34
TSPAN4-206ENST00000397408 SPATA32Q96LK8 384 aa23.45■■□□□ 1.34
TSPAN4-206ENST00000397408 DRC1Q96MC2 740 aa23.45■■□□□ 1.34
TSPAN4-206ENST00000397408 TIPINQ9BVW5 301 aa23.45■■□□□ 1.34
TSPAN4-206ENST00000397408 NFKBIZQ9BYH8 718 aa23.45■■□□□ 1.34
TSPAN4-206ENST00000397408 KCND2Q9NZV8 630 aa23.45■■□□□ 1.34
TSPAN4-206ENST00000397408 PIN4Q9Y237 131 aaKnown RBP23.45■■□□□ 1.34
TSPAN4-206ENST00000397408 TCHHQ07283 1943 aa23.44■■□□□ 1.34
TSPAN4-206ENST00000397408 A0A087X0B3 334 aa23.44■■□□□ 1.34
TSPAN4-206ENST00000397408 CA3P07451 260 aa23.44■■□□□ 1.34
TSPAN4-206ENST00000397408 SARSP49591 514 aaKnown RBP23.44■■□□□ 1.34
TSPAN4-206ENST00000397408 MBTD1Q05BQ5 628 aa23.44■■□□□ 1.34
TSPAN4-206ENST00000397408 MAPK7Q13164 816 aa23.44■■□□□ 1.34
TSPAN4-206ENST00000397408 CDCA2Q69YH5 1023 aaPredicted RBP23.44■■□□□ 1.34
TSPAN4-206ENST00000397408 CCDC73Q6ZRK6 1079 aa23.44■■□□□ 1.34
TSPAN4-206ENST00000397408 SLC24A5Q71RS6 500 aa23.44■■□□□ 1.34
TSPAN4-206ENST00000397408 PDILTQ8N807 584 aa23.44■■□□□ 1.34
TSPAN4-206ENST00000397408 DEPTORQ8TB45 409 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms