RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 DMP1Q13316 513 aaPredicted RBP26.08■■□□□ 1.77
TSPAN4-203ENST00000397397 CAPSQ13938 189 aa26.08■■□□□ 1.77
TSPAN4-203ENST00000397397 TFDP1Q14186 410 aa26.08■■□□□ 1.77
TSPAN4-203ENST00000397397 KMT5BQ4FZB7 885 aa26.08■■□□□ 1.77
TSPAN4-203ENST00000397397 ODR4Q5SWX8 454 aa26.08■■□□□ 1.77
TSPAN4-203ENST00000397397 PRPF38BQ5VTL8 546 aaKnown RBP26.08■■□□□ 1.77
TSPAN4-203ENST00000397397 CCDC155Q8N6L0 562 aa26.08■■□□□ 1.77
TSPAN4-203ENST00000397397 NLRP4Q96MN2 994 aa26.08■■□□□ 1.77
TSPAN4-203ENST00000397397 EXOC1Q9NV70 894 aa26.08■■□□□ 1.77
TSPAN4-203ENST00000397397 CCDC169A6NNP5 214 aa26.07■■□□□ 1.76
TSPAN4-203ENST00000397397 M0QZ92 97 aa26.07■■□□□ 1.76
TSPAN4-203ENST00000397397 GPC3P51654 580 aa26.07■■□□□ 1.76
TSPAN4-203ENST00000397397 MRPS6P82932 125 aaKnown RBP26.07■■□□□ 1.76
TSPAN4-203ENST00000397397 CDC42EP1Q00587 391 aa26.07■■□□□ 1.76
TSPAN4-203ENST00000397397 NLRP7Q8WX94 980 aa26.07■■□□□ 1.76
TSPAN4-203ENST00000397397 SCLT1Q96NL6 688 aa26.07■■□□□ 1.76
TSPAN4-203ENST00000397397 KIAA1468Q9P260 1216 aa26.07■■□□□ 1.76
TSPAN4-203ENST00000397397 SEL1LQ9UBV2 794 aa26.07■■□□□ 1.76
TSPAN4-203ENST00000397397 LRRIQ4A6NIV6 560 aa26.06■■□□□ 1.76
TSPAN4-203ENST00000397397 CLTBP09497 229 aa26.06■■□□□ 1.76
TSPAN4-203ENST00000397397 CTSHP09668 335 aa26.06■■□□□ 1.76
TSPAN4-203ENST00000397397 NAMPTP43490 491 aa26.06■■□□□ 1.76
TSPAN4-203ENST00000397397 NPTX2P47972 431 aa26.06■■□□□ 1.76
TSPAN4-203ENST00000397397 BFSP2Q13515 415 aa26.06■■□□□ 1.76
TSPAN4-203ENST00000397397 KIZQ2M2Z5 673 aa26.06■■□□□ 1.76
TSPAN4-203ENST00000397397 RNF149Q8NC42 400 aa26.06■■□□□ 1.76
TSPAN4-203ENST00000397397 SPATA20Q8TB22 786 aa26.06■■□□□ 1.76
TSPAN4-203ENST00000397397 CAGE1Q8TC20 777 aa26.06■■□□□ 1.76
TSPAN4-203ENST00000397397 DPF3Q92784 378 aa26.06■■□□□ 1.76
TSPAN4-203ENST00000397397 GSDMAQ96QA5 445 aa26.06■■□□□ 1.76
TSPAN4-203ENST00000397397 KMT5AQ9NQR1 393 aa26.06■■□□□ 1.76
TSPAN4-203ENST00000397397 TBC1D7Q9P0N9 293 aa26.06■■□□□ 1.76
TSPAN4-203ENST00000397397 KCNG1Q9UIX4 513 aa26.06■■□□□ 1.76
TSPAN4-203ENST00000397397 GINS2Q9Y248 185 aa26.06■■□□□ 1.76
TSPAN4-203ENST00000397397 ALPK3Q96L96 1907 aa26.06■■□□□ 1.76
TSPAN4-203ENST00000397397 A0A087WZ62 844 aa26.05■■□□□ 1.76
TSPAN4-203ENST00000397397 CAND2O75155 1236 aa26.05■■□□□ 1.76
TSPAN4-203ENST00000397397 GPR32O75388 356 aa26.05■■□□□ 1.76
TSPAN4-203ENST00000397397 SARSP49591 514 aaKnown RBP26.05■■□□□ 1.76
TSPAN4-203ENST00000397397 SMTNP53814 917 aa26.05■■□□□ 1.76
TSPAN4-203ENST00000397397 KCNB1Q14721 858 aa26.05■■□□□ 1.76
TSPAN4-203ENST00000397397 FAM178BQ8IXR5 827 aa26.05■■□□□ 1.76
TSPAN4-203ENST00000397397 ZNF710Q8N1W2 664 aa26.05■■□□□ 1.76
TSPAN4-203ENST00000397397 DEPTORQ8TB45 409 aa26.05■■□□□ 1.76
TSPAN4-203ENST00000397397 SPIRE2Q8WWL2 714 aa26.05■■□□□ 1.76
TSPAN4-203ENST00000397397 HPS3Q969F9 1004 aa26.05■■□□□ 1.76
TSPAN4-203ENST00000397397 FDXACB1Q9BRP7 624 aaPredicted RBP26.05■■□□□ 1.76
TSPAN4-203ENST00000397397 HTATIP2Q9BUP3 242 aa26.05■■□□□ 1.76
TSPAN4-203ENST00000397397 ADAMTS10Q9H324 1103 aa26.05■■□□□ 1.76
TSPAN4-203ENST00000397397 TMEM39AQ9NV64 488 aa26.05■■□□□ 1.76
TSPAN4-203ENST00000397397 RMND1Q9NWS8 449 aa26.05■■□□□ 1.76
TSPAN4-203ENST00000397397 TRPV2Q9Y5S1 764 aa26.05■■□□□ 1.76
TSPAN4-203ENST00000397397 CDY2AQ9Y6F7 541 aa26.05■■□□□ 1.76
TSPAN4-203ENST00000397397 CKBP12277 381 aa26.05■■□□□ 1.76
TSPAN4-203ENST00000397397 ZNF410Q86VK4 478 aa26.05■■□□□ 1.76
TSPAN4-203ENST00000397397 KIFC3Q9BVG8 833 aa26.05■■□□□ 1.76
TSPAN4-203ENST00000397397 CELF4Q9BZC1 486 aaKnown RBP26.05■■□□□ 1.76
TSPAN4-203ENST00000397397 MRPL44Q9H9J2 332 aaKnown RBP26.05■■□□□ 1.76
TSPAN4-203ENST00000397397 SLC16A4O15374 487 aa26.04■■□□□ 1.76
TSPAN4-203ENST00000397397 EHHADHQ08426 723 aa26.04■■□□□ 1.76
TSPAN4-203ENST00000397397 RBL2Q08999 1139 aa26.04■■□□□ 1.76
TSPAN4-203ENST00000397397 FAM26FQ5R3K3 315 aa26.04■■□□□ 1.76
TSPAN4-203ENST00000397397 ZNF618Q5T7W0 954 aa26.04■■□□□ 1.76
TSPAN4-203ENST00000397397 NT5DC1Q5TFE4 455 aa26.04■■□□□ 1.76
TSPAN4-203ENST00000397397 OSMRQ99650 979 aa26.04■■□□□ 1.76
TSPAN4-203ENST00000397397 NOC4LQ9BVI4 516 aaKnown RBP26.04■■□□□ 1.76
TSPAN4-203ENST00000397397 HIPK3Q9H422 1215 aa26.04■■□□□ 1.76
TSPAN4-203ENST00000397397 CDHR5Q9HBB8 845 aa26.04■■□□□ 1.76
TSPAN4-203ENST00000397397 OLFML3Q9NRN5 406 aa26.04■■□□□ 1.76
TSPAN4-203ENST00000397397 MAN1B1Q9UKM7 699 aa26.04■■□□□ 1.76
TSPAN4-203ENST00000397397 TBX21Q9UL17 535 aa26.04■■□□□ 1.76
TSPAN4-203ENST00000397397 DNAH12Q6ZR08 3092 aa26.03■■□□□ 1.76
TSPAN4-203ENST00000397397 K7ENM7 598 aa26.03■■□□□ 1.76
TSPAN4-203ENST00000397397 RHOBTB3O94955 611 aa26.03■■□□□ 1.76
TSPAN4-203ENST00000397397 CHRNA1P02708 482 aa26.03■■□□□ 1.76
TSPAN4-203ENST00000397397 NMT1P30419 496 aaKnown RBP26.03■■□□□ 1.76
TSPAN4-203ENST00000397397 PHKA2P46019 1235 aa26.03■■□□□ 1.76
TSPAN4-203ENST00000397397 NCKAP1LP55160 1127 aa26.03■■□□□ 1.76
TSPAN4-203ENST00000397397 POU5F1BQ06416 359 aa26.03■■□□□ 1.76
TSPAN4-203ENST00000397397 MGAT3Q09327 533 aa26.03■■□□□ 1.76
TSPAN4-203ENST00000397397 PSMD2Q13200 908 aa26.03■■□□□ 1.76
TSPAN4-203ENST00000397397 ZBTB8OSQ8IWT0 167 aa26.03■■□□□ 1.76
TSPAN4-203ENST00000397397 NTPCRQ9BSD7 190 aaKnown RBP26.03■■□□□ 1.76
TSPAN4-203ENST00000397397 GCOM2Q9BZD3 368 aaPredicted RBP26.03■■□□□ 1.76
TSPAN4-203ENST00000397397 PRDM5Q9NQX1 630 aaPredicted RBP26.03■■□□□ 1.76
TSPAN4-203ENST00000397397 BIN1O00499 593 aa26.02■■□□□ 1.76
TSPAN4-203ENST00000397397 MAPTP10636 758 aaKnown RBP26.02■■□□□ 1.76
TSPAN4-203ENST00000397397 CRYBB1P53674 252 aaPredicted RBP26.02■■□□□ 1.76
TSPAN4-203ENST00000397397 PTENP60484 403 aa26.02■■□□□ 1.76
TSPAN4-203ENST00000397397 FAM26DQ5JW98 314 aa26.02■■□□□ 1.76
TSPAN4-203ENST00000397397 ISM2Q6H9L7 571 aa26.02■■□□□ 1.76
TSPAN4-203ENST00000397397 RBM43Q6ZSC3 357 aaKnown RBP26.02■■□□□ 1.76
TSPAN4-203ENST00000397397 SLC17A8Q8NDX2 589 aa26.02■■□□□ 1.76
TSPAN4-203ENST00000397397 FIZ1Q96SL8 496 aa26.02■■□□□ 1.76
TSPAN4-203ENST00000397397 PPP1R12CQ9BZL4 782 aa26.02■■□□□ 1.76
TSPAN4-203ENST00000397397 C2orf40Q9H1Z8 148 aa26.02■■□□□ 1.76
TSPAN4-203ENST00000397397 IFT122Q9HBG6 1241 aa26.02■■□□□ 1.76
TSPAN4-203ENST00000397397 SLC39A2Q9NP94 309 aa26.02■■□□□ 1.76
TSPAN4-203ENST00000397397 ADGRA3Q8IWK6 1321 aa26.02■■□□□ 1.76
TSPAN4-203ENST00000397397 H0YCG3 227 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms