RNA–Protein interactions for RNA: ENST00000397108.8

FGFR1-208, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FGFR1, Length 2,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-208ENST00000397108 C3orf20Q8ND61 904 aa12.79□□□□□ -0.36
FGFR1-208ENST00000397108 XPO6Q96QU8 1125 aaKnown RBP12.79□□□□□ -0.36
FGFR1-208ENST00000397108 AGTPBP1Q9UPW5 1226 aa12.79□□□□□ -0.36
FGFR1-208ENST00000397108 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.79□□□□□ -0.36
FGFR1-208ENST00000397108 SH3BP1Q9Y3L3 701 aa12.79□□□□□ -0.36
FGFR1-208ENST00000397108 MYH4Q9Y623 1939 aa12.78□□□□□ -0.36
FGFR1-208ENST00000397108 EVI5O60447 810 aa12.78□□□□□ -0.36
FGFR1-208ENST00000397108 FCER1AP12319 257 aa12.78□□□□□ -0.36
FGFR1-208ENST00000397108 IFNAR2P48551 515 aa12.78□□□□□ -0.36
FGFR1-208ENST00000397108 RAB27AP51159 221 aa12.78□□□□□ -0.36
FGFR1-208ENST00000397108 ALDH5A1P51649 535 aaPredicted RBP12.78□□□□□ -0.36
FGFR1-208ENST00000397108 TAF1CQ15572 869 aaPredicted RBP12.78□□□□□ -0.36
FGFR1-208ENST00000397108 LRRC34Q8IZ02 419 aa12.78□□□□□ -0.36
FGFR1-208ENST00000397108 KIAA1683Q9H0B3 1180 aa12.78□□□□□ -0.36
FGFR1-208ENST00000397108 DDX47Q9H0S4 455 aaKnown RBP12.78□□□□□ -0.36
FGFR1-208ENST00000397108 SLC5A4Q9NY91 659 aa12.78□□□□□ -0.36
FGFR1-208ENST00000397108 PLIN4Q96Q06 1357 aa12.78□□□□□ -0.36
FGFR1-208ENST00000397108 KCNK3O14649 394 aa12.78□□□□□ -0.36
FGFR1-208ENST00000397108 DAPK3O43293 454 aa12.78□□□□□ -0.36
FGFR1-208ENST00000397108 VIMP08670 466 aaKnown RBP12.78□□□□□ -0.36
FGFR1-208ENST00000397108 USP17L2Q6R6M4 530 aa12.78□□□□□ -0.36
FGFR1-208ENST00000397108 LRIG3Q6UXM1 1119 aa12.78□□□□□ -0.36
FGFR1-208ENST00000397108 ANKS4BQ8N8V4 417 aa12.78□□□□□ -0.36
FGFR1-208ENST00000397108 ISCUQ9H1K1 167 aa12.78□□□□□ -0.36
FGFR1-208ENST00000397108 DPH5Q9H2P9 285 aa12.78□□□□□ -0.36
FGFR1-208ENST00000397108 R3HDMLQ9H3Y0 253 aa12.78□□□□□ -0.36
FGFR1-208ENST00000397108 ZFYVE28Q9HCC9 887 aa12.78□□□□□ -0.36
FGFR1-208ENST00000397108 TMOD4Q9NZQ9 345 aa12.78□□□□□ -0.36
FGFR1-208ENST00000397108 FGRP09769 529 aa12.77□□□□□ -0.36
FGFR1-208ENST00000397108 CHN1P15882 459 aa12.77□□□□□ -0.36
FGFR1-208ENST00000397108 KLRC1P26715 233 aa12.77□□□□□ -0.36
FGFR1-208ENST00000397108 STK4Q13043 487 aa12.77□□□□□ -0.36
FGFR1-208ENST00000397108 BIRC3Q13489 604 aa12.77□□□□□ -0.36
FGFR1-208ENST00000397108 NAALADL2Q58DX5 795 aa12.77□□□□□ -0.36
FGFR1-208ENST00000397108 CRELD2Q6UXH1 353 aaPredicted RBP12.77□□□□□ -0.36
FGFR1-208ENST00000397108 C1orf131Q8NDD1 294 aaKnown RBP12.77□□□□□ -0.36
FGFR1-208ENST00000397108 ACER1Q8TDN7 264 aa12.77□□□□□ -0.36
FGFR1-208ENST00000397108 KANSL2Q9H9L4 492 aa12.77□□□□□ -0.36
FGFR1-208ENST00000397108 SLC12A4Q9UP95 1085 aa12.77□□□□□ -0.36
FGFR1-208ENST00000397108 FAM170AA1A519 330 aa12.77□□□□□ -0.37
FGFR1-208ENST00000397108 KLRC4O43908 158 aa12.77□□□□□ -0.37
FGFR1-208ENST00000397108 UBOX5O94941 541 aa12.77□□□□□ -0.37
FGFR1-208ENST00000397108 SHBGP04278 402 aa12.77□□□□□ -0.37
FGFR1-208ENST00000397108 MMEP08473 750 aa12.77□□□□□ -0.37
FGFR1-208ENST00000397108 RPS6KA3P51812 740 aa12.77□□□□□ -0.37
FGFR1-208ENST00000397108 TNNC1P63316 161 aa12.77□□□□□ -0.37
FGFR1-208ENST00000397108 DHX9Q08211 1270 aaKnown RBP12.77□□□□□ -0.37
FGFR1-208ENST00000397108 TREML2Q5T2D2 321 aa12.77□□□□□ -0.37
FGFR1-208ENST00000397108 ZNF444Q8N0Y2 327 aaPredicted RBP12.77□□□□□ -0.37
FGFR1-208ENST00000397108 P2RX5Q93086 422 aa12.77□□□□□ -0.37
FGFR1-208ENST00000397108 LRRC45Q96CN5 670 aa12.77□□□□□ -0.37
FGFR1-208ENST00000397108 C12orf42Q96LP6 360 aa12.77□□□□□ -0.37
FGFR1-208ENST00000397108 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.77□□□□□ -0.37
FGFR1-208ENST00000397108 PACSIN1Q9BY11 444 aa12.77□□□□□ -0.37
FGFR1-208ENST00000397108 TRIM33Q9UPN9 1127 aa12.77□□□□□ -0.37
FGFR1-208ENST00000397108 MAP3K13O43283 966 aa12.76□□□□□ -0.37
FGFR1-208ENST00000397108 CEP104O60308 925 aa12.76□□□□□ -0.37
FGFR1-208ENST00000397108 PCP11498 1178 aaKnown RBP12.76□□□□□ -0.37
FGFR1-208ENST00000397108 CDK17Q00537 523 aa12.76□□□□□ -0.37
FGFR1-208ENST00000397108 DGKZQ13574 1117 aa12.76□□□□□ -0.37
FGFR1-208ENST00000397108 TRPM8Q7Z2W7 1104 aa12.76□□□□□ -0.37
FGFR1-208ENST00000397108 CACNA2D4Q7Z3S7 1137 aa12.76□□□□□ -0.37
FGFR1-208ENST00000397108 SIAH1Q8IUQ4 282 aa12.76□□□□□ -0.37
FGFR1-208ENST00000397108 USP38Q8NB14 1042 aa12.76□□□□□ -0.37
FGFR1-208ENST00000397108 UHMK1Q8TAS1 419 aaKnown RBP12.76□□□□□ -0.37
FGFR1-208ENST00000397108 LRRC15Q8TF66 581 aa12.76□□□□□ -0.37
FGFR1-208ENST00000397108 INPP4AQ96PE3 977 aaPredicted RBP12.76□□□□□ -0.37
FGFR1-208ENST00000397108 PARK7Q99497 189 aaKnown RBP12.76□□□□□ -0.37
FGFR1-208ENST00000397108 OSBPL1AQ9BXW6 950 aa12.76□□□□□ -0.37
FGFR1-208ENST00000397108 KRT23Q9C075 422 aa12.76□□□□□ -0.37
FGFR1-208ENST00000397108 EMILIN3Q9NT22 766 aa12.76□□□□□ -0.37
FGFR1-208ENST00000397108 CORO1CQ9ULV4 474 aaPredicted RBP12.76□□□□□ -0.37
FGFR1-208ENST00000397108 ATP8A1Q9Y2Q0 1164 aa12.76□□□□□ -0.37
FGFR1-208ENST00000397108 ADGRA2Q96PE1 1338 aa12.76□□□□□ -0.37
FGFR1-208ENST00000397108 IGKV6D-41A0A0C4DH26 115 aa12.76□□□□□ -0.37
FGFR1-208ENST00000397108 GPR25O00155 361 aa12.76□□□□□ -0.37
FGFR1-208ENST00000397108 NQO1P15559 274 aaKnown RBP12.76□□□□□ -0.37
FGFR1-208ENST00000397108 PDE4DQ08499 809 aa12.76□□□□□ -0.37
FGFR1-208ENST00000397108 ERMARDQ5T6L9 678 aa12.76□□□□□ -0.37
FGFR1-208ENST00000397108 CLEC10AQ8IUN9 316 aa12.76□□□□□ -0.37
FGFR1-208ENST00000397108 RASGRP4Q8TDF6 673 aa12.76□□□□□ -0.37
FGFR1-208ENST00000397108 PIDD1Q9HB75 910 aa12.76□□□□□ -0.37
FGFR1-208ENST00000397108 DISC1Q9NRI5 854 aa12.76□□□□□ -0.37
FGFR1-208ENST00000397108 AMACRQ9UHK6 382 aa12.76□□□□□ -0.37
FGFR1-208ENST00000397108 A0A1W2PRG0 241 aa12.75□□□□□ -0.37
FGFR1-208ENST00000397108 TLR2O60603 784 aa12.75□□□□□ -0.37
FGFR1-208ENST00000397108 SMIM24O75264 130 aa12.75□□□□□ -0.37
FGFR1-208ENST00000397108 BMP15O95972 392 aa12.75□□□□□ -0.37
FGFR1-208ENST00000397108 GNAT1P11488 350 aa12.75□□□□□ -0.37
FGFR1-208ENST00000397108 NLRP5P59047 1200 aa12.75□□□□□ -0.37
FGFR1-208ENST00000397108 PABPC4Q13310 644 aaKnown RBP eCLIP12.75□□□□□ -0.37
FGFR1-208ENST00000397108 NPY5RQ15761 445 aa12.75□□□□□ -0.37
FGFR1-208ENST00000397108 ANKRD20A2Q5SQ80 823 aa12.75□□□□□ -0.37
FGFR1-208ENST00000397108 ANKRD20A1Q5TYW2 823 aa12.75□□□□□ -0.37
FGFR1-208ENST00000397108 ANKRD20A3Q5VUR7 823 aa12.75□□□□□ -0.37
FGFR1-208ENST00000397108 GIMAP8Q8ND71 665 aaPredicted RBP12.75□□□□□ -0.37
FGFR1-208ENST00000397108 NEDD1Q8NHV4 660 aa12.75□□□□□ -0.37
FGFR1-208ENST00000397108 P3H4Q92791 437 aa12.75□□□□□ -0.37
FGFR1-208ENST00000397108 BORCS6Q96GS4 357 aa12.75□□□□□ -0.37
FGFR1-208ENST00000397108 ERGIC2Q96RQ1 377 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms