RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 RRN3P2A6NIE6 340 aa16.73■□□□□ 0.27
GNE-202ENST00000396594 NNMTP40261 264 aa16.73■□□□□ 0.27
GNE-202ENST00000396594 RAD51Q06609 339 aa16.73■□□□□ 0.27
GNE-202ENST00000396594 CEP55Q53EZ4 464 aa16.73■□□□□ 0.27
GNE-202ENST00000396594 RAPH1Q70E73 1250 aa16.73■□□□□ 0.27
GNE-202ENST00000396594 ZNF677Q86XU0 584 aa16.73■□□□□ 0.27
GNE-202ENST00000396594 GIPC2Q8TF65 315 aa16.73■□□□□ 0.27
GNE-202ENST00000396594 PSMB7Q99436 277 aa16.73■□□□□ 0.27
GNE-202ENST00000396594 SENP1Q9P0U3 644 aa16.73■□□□□ 0.27
GNE-202ENST00000396594 LRRD1A4D1F6 860 aa16.73■□□□□ 0.27
GNE-202ENST00000396594 PRDX5P30044 214 aa16.73■□□□□ 0.27
GNE-202ENST00000396594 ZNF543Q08ER8 600 aa16.73■□□□□ 0.27
GNE-202ENST00000396594 CTTNQ14247 550 aaKnown RBP16.73■□□□□ 0.27
GNE-202ENST00000396594 JADE1Q6IE81 842 aa16.73■□□□□ 0.27
GNE-202ENST00000396594 ADGRF4Q8IZF3 695 aa16.73■□□□□ 0.27
GNE-202ENST00000396594 SYNPO2Q9UMS6 1093 aa16.73■□□□□ 0.27
GNE-202ENST00000396594 CLIC2O15247 247 aa16.72■□□□□ 0.27
GNE-202ENST00000396594 SFR1Q86XK3 245 aa16.72■□□□□ 0.27
GNE-202ENST00000396594 MRRFQ96E11 262 aaKnown RBP16.72■□□□□ 0.27
GNE-202ENST00000396594 C7orf25Q9BPX7 421 aa16.72■□□□□ 0.27
GNE-202ENST00000396594 ZRANB2O95218 330 aaKnown RBP eCLIP16.72■□□□□ 0.27
GNE-202ENST00000396594 RALAP11233 206 aa16.72■□□□□ 0.27
GNE-202ENST00000396594 STMN1P16949 149 aa16.72■□□□□ 0.27
GNE-202ENST00000396594 CCNYQ8ND76 341 aa16.72■□□□□ 0.27
GNE-202ENST00000396594 KRT35Q92764 455 aa16.72■□□□□ 0.27
GNE-202ENST00000396594 ANKEF1Q9NU02 776 aa16.72■□□□□ 0.27
GNE-202ENST00000396594 LMCD1Q9NZU5 365 aa16.72■□□□□ 0.27
GNE-202ENST00000396594 PYGBP11216 843 aa16.72■□□□□ 0.27
GNE-202ENST00000396594 CYP2C19P33261 490 aa16.72■□□□□ 0.27
GNE-202ENST00000396594 VEPH1Q14D04 833 aa16.72■□□□□ 0.27
GNE-202ENST00000396594 DUOXA2Q1HG44 320 aa16.72■□□□□ 0.27
GNE-202ENST00000396594 RSBN1LQ6PCB5 846 aaPredicted RBP16.72■□□□□ 0.27
GNE-202ENST00000396594 NXF1Q9UBU9 619 aaKnown RBP16.72■□□□□ 0.27
GNE-202ENST00000396594 CFAP69A5D8W1 941 aa16.72■□□□□ 0.27
GNE-202ENST00000396594 TMCC1O94876 653 aa16.72■□□□□ 0.27
GNE-202ENST00000396594 CD4P01730 458 aa16.72■□□□□ 0.27
GNE-202ENST00000396594 SDC4P31431 198 aa16.72■□□□□ 0.27
GNE-202ENST00000396594 MTA1Q13330 715 aa16.72■□□□□ 0.27
GNE-202ENST00000396594 EPHA10Q5JZY3 1008 aa16.72■□□□□ 0.27
GNE-202ENST00000396594 RNF219Q5W0B1 726 aaPredicted RBP16.72■□□□□ 0.27
GNE-202ENST00000396594 KAZNQ674X7 775 aa16.72■□□□□ 0.27
GNE-202ENST00000396594 OR6B3Q8NGW1 331 aa16.72■□□□□ 0.27
GNE-202ENST00000396594 ZBTB18Q99592 522 aa16.72■□□□□ 0.27
GNE-202ENST00000396594 MTMR4Q9NYA4 1195 aa16.72■□□□□ 0.27
GNE-202ENST00000396594 ZNF609O15014 1411 aa16.72■□□□□ 0.27
GNE-202ENST00000396594 CPS1P31327 1500 aa16.71■□□□□ 0.27
GNE-202ENST00000396594 RASGRF2O14827 1237 aa16.71■□□□□ 0.27
GNE-202ENST00000396594 CTNND1O60716 968 aaKnown RBP16.71■□□□□ 0.27
GNE-202ENST00000396594 DCTN3O75935 186 aa16.71■□□□□ 0.27
GNE-202ENST00000396594 EPHB1P54762 984 aa16.71■□□□□ 0.27
GNE-202ENST00000396594 NOP14P78316 857 aaKnown RBP16.71■□□□□ 0.27
GNE-202ENST00000396594 CD302Q8IX05 232 aa16.71■□□□□ 0.27
GNE-202ENST00000396594 ZMYND12Q9H0C1 365 aa16.71■□□□□ 0.27
GNE-202ENST00000396594 TDRD3Q9H7E2 651 aaKnown RBP16.71■□□□□ 0.27
GNE-202ENST00000396594 UVRAGQ9P2Y5 699 aa16.71■□□□□ 0.27
GNE-202ENST00000396594 SREBF2Q12772 1141 aa16.71■□□□□ 0.27
GNE-202ENST00000396594 FSCBQ5H9T9 825 aa16.71■□□□□ 0.27
GNE-202ENST00000396594 NXNQ6DKJ4 435 aa16.71■□□□□ 0.27
GNE-202ENST00000396594 AXIN2Q9Y2T1 843 aa16.71■□□□□ 0.27
GNE-202ENST00000396594 MX2P20592 715 aa16.71■□□□□ 0.27
GNE-202ENST00000396594 ATG9AQ7Z3C6 839 aa16.71■□□□□ 0.27
GNE-202ENST00000396594 FBXO33Q7Z6M2 555 aa16.71■□□□□ 0.27
GNE-202ENST00000396594 DENND3A2RUS2 1198 aa16.71■□□□□ 0.27
GNE-202ENST00000396594 GH1P01241 217 aa16.71■□□□□ 0.27
GNE-202ENST00000396594 APOEP02649 317 aa16.71■□□□□ 0.27
GNE-202ENST00000396594 LRRC41Q15345 812 aa16.71■□□□□ 0.27
GNE-202ENST00000396594 ZSCAN26Q16670 478 aa16.71■□□□□ 0.27
GNE-202ENST00000396594 CYB5R4Q7L1T6 521 aa16.71■□□□□ 0.27
GNE-202ENST00000396594 RHOT1Q8IXI2 618 aa16.71■□□□□ 0.27
GNE-202ENST00000396594 GOLGA8SH3BPF8 625 aa16.7■□□□□ 0.26
GNE-202ENST00000396594 SLC10A5Q5PT55 438 aa16.7■□□□□ 0.26
GNE-202ENST00000396594 MIPOL1Q8TD10 442 aa16.7■□□□□ 0.26
GNE-202ENST00000396594 FRMD8Q9BZ67 464 aaPredicted RBP16.7■□□□□ 0.26
GNE-202ENST00000396594 FRMD8P1Q9BZ68 369 aaPredicted RBP16.7■□□□□ 0.26
GNE-202ENST00000396594 PCIF1Q9H4Z3 704 aa16.7■□□□□ 0.26
GNE-202ENST00000396594 EFCC1Q9HA90 598 aa16.7■□□□□ 0.26
GNE-202ENST00000396594 JPH1Q9HDC5 661 aaPredicted RBP16.7■□□□□ 0.26
GNE-202ENST00000396594 ABHD10Q9NUJ1 306 aa16.7■□□□□ 0.26
GNE-202ENST00000396594 HACL1Q9UJ83 578 aa16.7■□□□□ 0.26
GNE-202ENST00000396594 IQSEC2Q5JU85 1478 aa16.7■□□□□ 0.26
GNE-202ENST00000396594 MKRN3Q13064 507 aaKnown RBP16.7■□□□□ 0.26
GNE-202ENST00000396594 EFHC2Q5JST6 749 aa16.7■□□□□ 0.26
GNE-202ENST00000396594 PI16Q6UXB8 463 aa16.7■□□□□ 0.26
GNE-202ENST00000396594 DYDC2Q96IM9 177 aa16.7■□□□□ 0.26
GNE-202ENST00000396594 NLRP4Q96MN2 994 aa16.7■□□□□ 0.26
GNE-202ENST00000396594 TSSK1BQ9BXA7 367 aa16.7■□□□□ 0.26
GNE-202ENST00000396594 POLR3FQ9H1D9 316 aaPredicted RBP16.7■□□□□ 0.26
GNE-202ENST00000396594 CNOT8Q9UFF9 292 aaKnown RBP16.7■□□□□ 0.26
GNE-202ENST00000396594 TARSL2A2RTX5 802 aaKnown RBP16.7■□□□□ 0.26
GNE-202ENST00000396594 ACADSBP45954 432 aa16.7■□□□□ 0.26
GNE-202ENST00000396594 ZBTB33Q86T24 672 aa16.7■□□□□ 0.26
GNE-202ENST00000396594 PYROXD1Q8WU10 500 aa16.7■□□□□ 0.26
GNE-202ENST00000396594 GPRASP2Q96D09 838 aa16.7■□□□□ 0.26
GNE-202ENST00000396594 EPB41L5Q9HCM4 733 aa16.7■□□□□ 0.26
GNE-202ENST00000396594 PARVAQ9NVD7 372 aa16.7■□□□□ 0.26
GNE-202ENST00000396594 ZMYM2Q9UBW7 1377 aa16.7■□□□□ 0.26
GNE-202ENST00000396594 SSU72P8A0A1W2PR75 194 aa16.7■□□□□ 0.26
GNE-202ENST00000396594 ARHGAP42A6NI28 874 aa16.7■□□□□ 0.26
GNE-202ENST00000396594 CETPP11597 493 aa16.7■□□□□ 0.26
GNE-202ENST00000396594 PHF20Q9BVI0 1012 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms