RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 HDAC6Q9UBN7 1215 aa17.59■□□□□ 0.41
SNX6-202ENST00000396526 TULP1O00294 542 aaPredicted RBP17.58■□□□□ 0.41
SNX6-202ENST00000396526 MAPK13O15264 365 aa17.58■□□□□ 0.41
SNX6-202ENST00000396526 VAMP7P51809 220 aa17.58■□□□□ 0.41
SNX6-202ENST00000396526 UGCGQ16739 394 aa17.58■□□□□ 0.41
SNX6-202ENST00000396526 PLA2G4FQ68DD2 849 aa17.58■□□□□ 0.41
SNX6-202ENST00000396526 PCIF1Q9H4Z3 704 aa17.58■□□□□ 0.41
SNX6-202ENST00000396526 SNX12Q9UMY4 172 aa17.58■□□□□ 0.41
SNX6-202ENST00000396526 SNCAIPQ9Y6H5 919 aa17.58■□□□□ 0.41
SNX6-202ENST00000396526 SPATA31C2B4DYI2 1134 aa17.58■□□□□ 0.4
SNX6-202ENST00000396526 KCNA2P16389 499 aa17.58■□□□□ 0.4
SNX6-202ENST00000396526 XKR3Q5GH77 459 aa17.58■□□□□ 0.4
SNX6-202ENST00000396526 LMBR1Q8WVP7 490 aa17.58■□□□□ 0.4
SNX6-202ENST00000396526 SPIRE2Q8WWL2 714 aa17.58■□□□□ 0.4
SNX6-202ENST00000396526 SEPT9Q9UHD8 586 aaPredicted RBP17.58■□□□□ 0.4
SNX6-202ENST00000396526 A0A087X0T9 212 aa17.57■□□□□ 0.4
SNX6-202ENST00000396526 FAM228BP0C875 321 aa17.57■□□□□ 0.4
SNX6-202ENST00000396526 ACTR2P61160 394 aa17.57■□□□□ 0.4
SNX6-202ENST00000396526 APBA1Q02410 837 aa17.57■□□□□ 0.4
SNX6-202ENST00000396526 PTK2Q05397 1052 aa17.57■□□□□ 0.4
SNX6-202ENST00000396526 ALKBH5Q6P6C2 394 aaKnown RBP17.57■□□□□ 0.4
SNX6-202ENST00000396526 LBX2Q6XYB7 198 aa17.57■□□□□ 0.4
SNX6-202ENST00000396526 TMEM174Q8WUU8 243 aa17.57■□□□□ 0.4
SNX6-202ENST00000396526 SH2D3AQ9BRG2 576 aa17.57■□□□□ 0.4
SNX6-202ENST00000396526 HSPBP1Q9NZL4 362 aa17.57■□□□□ 0.4
SNX6-202ENST00000396526 RNF14Q9UBS8 474 aa17.57■□□□□ 0.4
SNX6-202ENST00000396526 DNAJC12Q9UKB3 198 aa17.57■□□□□ 0.4
SNX6-202ENST00000396526 RHOXF2BP0C7M4 288 aa17.57■□□□□ 0.4
SNX6-202ENST00000396526 NCKAP1LP55160 1127 aa17.57■□□□□ 0.4
SNX6-202ENST00000396526 PPATQ06203 517 aa17.57■□□□□ 0.4
SNX6-202ENST00000396526 GPS2Q13227 327 aa17.57■□□□□ 0.4
SNX6-202ENST00000396526 NAB2Q15742 525 aa17.57■□□□□ 0.4
SNX6-202ENST00000396526 IRF2BP2Q7Z5L9 587 aa17.57■□□□□ 0.4
SNX6-202ENST00000396526 ERO1BQ86YB8 467 aa17.57■□□□□ 0.4
SNX6-202ENST00000396526 ANKRD13AQ8IZ07 590 aa17.57■□□□□ 0.4
SNX6-202ENST00000396526 PROCA1Q8NCQ7 364 aaPredicted RBP17.57■□□□□ 0.4
SNX6-202ENST00000396526 RHOXF2Q9BQY4 288 aa17.57■□□□□ 0.4
SNX6-202ENST00000396526 INTS2Q9H0H0 1204 aaKnown RBP17.57■□□□□ 0.4
SNX6-202ENST00000396526 CXCL11O14625 94 aa17.57■□□□□ 0.4
SNX6-202ENST00000396526 NCAPG2Q86XI2 1143 aa17.57■□□□□ 0.4
SNX6-202ENST00000396526 RIOX2Q8IUF8 465 aa17.57■□□□□ 0.4
SNX6-202ENST00000396526 ATP6V0A4Q9HBG4 840 aa17.57■□□□□ 0.4
SNX6-202ENST00000396526 APEX2Q9UBZ4 518 aa17.57■□□□□ 0.4
SNX6-202ENST00000396526 TRIM49P0CI25 452 aa17.56■□□□□ 0.4
SNX6-202ENST00000396526 TRIM49CP0CI26 452 aa17.56■□□□□ 0.4
SNX6-202ENST00000396526 COPB2P35606 906 aa17.56■□□□□ 0.4
SNX6-202ENST00000396526 SOX5P35711 763 aa17.56■□□□□ 0.4
SNX6-202ENST00000396526 ANO5Q75V66 913 aa17.56■□□□□ 0.4
SNX6-202ENST00000396526 MSANTD4Q8NCY6 345 aa17.56■□□□□ 0.4
SNX6-202ENST00000396526 TAF4BQ92750 862 aa17.56■□□□□ 0.4
SNX6-202ENST00000396526 CAPN6Q9Y6Q1 641 aa17.56■□□□□ 0.4
SNX6-202ENST00000396526 DENND3A2RUS2 1198 aa17.56■□□□□ 0.4
SNX6-202ENST00000396526 BUB1O43683 1085 aa17.56■□□□□ 0.4
SNX6-202ENST00000396526 H2AFZP0C0S5 128 aa17.56■□□□□ 0.4
SNX6-202ENST00000396526 SCP2P22307 547 aa17.56■□□□□ 0.4
SNX6-202ENST00000396526 NOP2P46087 812 aaKnown RBP17.56■□□□□ 0.4
SNX6-202ENST00000396526 MAP9Q49MG5 647 aa17.56■□□□□ 0.4
SNX6-202ENST00000396526 H2AFVQ71UI9 128 aa17.56■□□□□ 0.4
SNX6-202ENST00000396526 UPF1Q92900 1129 aaKnown RBP eCLIP17.56■□□□□ 0.4
SNX6-202ENST00000396526 GPRC5CQ9NQ84 441 aa17.56■□□□□ 0.4
SNX6-202ENST00000396526 TBX20Q9UMR3 447 aa17.56■□□□□ 0.4
SNX6-202ENST00000396526 NPTX2P47972 431 aa17.56■□□□□ 0.4
SNX6-202ENST00000396526 CC2D1AQ6P1N0 951 aaPredicted RBP17.56■□□□□ 0.4
SNX6-202ENST00000396526 IKZF4Q9H2S9 585 aa17.56■□□□□ 0.4
SNX6-202ENST00000396526 ICAM3P32942 547 aa17.55■□□□□ 0.4
SNX6-202ENST00000396526 RTP1P59025 263 aa17.55■□□□□ 0.4
SNX6-202ENST00000396526 DRAP1Q14919 205 aaPredicted RBP17.55■□□□□ 0.4
SNX6-202ENST00000396526 BICD1Q96G01 975 aa17.55■□□□□ 0.4
SNX6-202ENST00000396526 FHDC1Q9C0D6 1143 aaPredicted RBP17.55■□□□□ 0.4
SNX6-202ENST00000396526 EPC1Q9H2F5 836 aa17.55■□□□□ 0.4
SNX6-202ENST00000396526 PHIPQ8WWQ0 1821 aa17.55■□□□□ 0.4
SNX6-202ENST00000396526 SRGAP2O75044 1071 aa17.55■□□□□ 0.4
SNX6-202ENST00000396526 SUPT20HL2P0C7V6 817 aa17.55■□□□□ 0.4
SNX6-202ENST00000396526 PRKCEQ02156 737 aa17.55■□□□□ 0.4
SNX6-202ENST00000396526 NTPCRQ9BSD7 190 aaKnown RBP17.55■□□□□ 0.4
SNX6-202ENST00000396526 TMEM150BA6NC51 233 aa17.54■□□□□ 0.4
SNX6-202ENST00000396526 SLC25A27O95847 323 aa17.54■□□□□ 0.4
SNX6-202ENST00000396526 POLGP54098 1239 aaPredicted RBP17.54■□□□□ 0.4
SNX6-202ENST00000396526 NEDD9Q14511 834 aa17.54■□□□□ 0.4
SNX6-202ENST00000396526 SEPT14Q6ZU15 432 aa17.54■□□□□ 0.4
SNX6-202ENST00000396526 ZNF571Q7Z3V5 609 aaPredicted RBP17.54■□□□□ 0.4
SNX6-202ENST00000396526 OTUD5Q96G74 571 aa17.54■□□□□ 0.4
SNX6-202ENST00000396526 CBWD1Q9BRT8 395 aa17.54■□□□□ 0.4
SNX6-202ENST00000396526 SIX2Q9NPC8 291 aa17.54■□□□□ 0.4
SNX6-202ENST00000396526 ZNF302Q9NR11 478 aa17.54■□□□□ 0.4
SNX6-202ENST00000396526 CYP26B1Q9NR63 512 aa17.54■□□□□ 0.4
SNX6-202ENST00000396526 NRBP2Q9NSY0 501 aa17.54■□□□□ 0.4
SNX6-202ENST00000396526 NAGPAQ9UK23 515 aa17.54■□□□□ 0.4
SNX6-202ENST00000396526 INTUQ9ULD6 942 aa17.54■□□□□ 0.4
SNX6-202ENST00000396526 EMSYQ7Z589 1322 aa17.54■□□□□ 0.4
SNX6-202ENST00000396526 TNFAIP3P21580 790 aa17.54■□□□□ 0.4
SNX6-202ENST00000396526 MXI1P50539 228 aa17.54■□□□□ 0.4
SNX6-202ENST00000396526 JAM2P57087 298 aa17.54■□□□□ 0.4
SNX6-202ENST00000396526 ABHD15Q6UXT9 468 aa17.54■□□□□ 0.4
SNX6-202ENST00000396526 MAP4K3Q8IVH8 894 aa17.54■□□□□ 0.4
SNX6-202ENST00000396526 HNRNPLLQ8WVV9 542 aaKnown RBP17.54■□□□□ 0.4
SNX6-202ENST00000396526 PAGR1Q9BTK6 254 aa17.54■□□□□ 0.4
SNX6-202ENST00000396526 SPATC1LQ9H0A9 340 aa17.54■□□□□ 0.4
SNX6-202ENST00000396526 ELP3Q9H9T3 547 aa17.54■□□□□ 0.4
SNX6-202ENST00000396526 BTNL10A8MVZ5 291 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms