RNA–Protein interactions for RNA: ENST00000396172.5

DDX39B-202, Transcript of DExD-box helicase 39B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39B, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-202ENST00000396172 LINC01465Q8N7H1 131 aa10.9□□□□□ -0.66
DDX39B-202ENST00000396172 SLC43A3Q8NBI5 491 aa10.9□□□□□ -0.66
DDX39B-202ENST00000396172 ERCC4Q92889 916 aaPredicted RBP10.9□□□□□ -0.66
DDX39B-202ENST00000396172 NAT10Q9H0A0 1025 aaKnown RBP10.9□□□□□ -0.66
DDX39B-202ENST00000396172 C2orf40Q9H1Z8 148 aa10.9□□□□□ -0.66
DDX39B-202ENST00000396172 MRPL44Q9H9J2 332 aaKnown RBP10.9□□□□□ -0.66
DDX39B-202ENST00000396172 RSPH10B2B2RC85 870 aa10.9□□□□□ -0.67
DDX39B-202ENST00000396172 K7ENM7 598 aa10.9□□□□□ -0.67
DDX39B-202ENST00000396172 M0QZ92 97 aa10.9□□□□□ -0.67
DDX39B-202ENST00000396172 ARVCFO00192 962 aa10.9□□□□□ -0.67
DDX39B-202ENST00000396172 CAND2O75155 1236 aa10.9□□□□□ -0.67
DDX39B-202ENST00000396172 RSPH10BP0C881 870 aa10.9□□□□□ -0.67
DDX39B-202ENST00000396172 POU5F1BQ06416 359 aa10.9□□□□□ -0.67
DDX39B-202ENST00000396172 TYRO3Q06418 890 aa10.9□□□□□ -0.67
DDX39B-202ENST00000396172 MARCH8Q5T0T0 291 aa10.9□□□□□ -0.67
DDX39B-202ENST00000396172 LRSAM1Q6UWE0 723 aa10.9□□□□□ -0.67
DDX39B-202ENST00000396172 ZNF410Q86VK4 478 aa10.9□□□□□ -0.67
DDX39B-202ENST00000396172 ZBTB8OSQ8IWT0 167 aa10.9□□□□□ -0.67
DDX39B-202ENST00000396172 DAW1Q8N136 415 aa10.9□□□□□ -0.67
DDX39B-202ENST00000396172 MLKLQ8NB16 471 aa10.9□□□□□ -0.67
DDX39B-202ENST00000396172 ST6GALNAC4Q9H4F1 302 aa10.9□□□□□ -0.67
DDX39B-202ENST00000396172 KMT5AQ9NQR1 393 aa10.9□□□□□ -0.67
DDX39B-202ENST00000396172 SUCLA2Q9P2R7 463 aaPredicted RBP10.9□□□□□ -0.67
DDX39B-202ENST00000396172 PCDHB13Q9Y5F0 798 aa10.9□□□□□ -0.67
DDX39B-202ENST00000396172 BIN1O00499 593 aa10.89□□□□□ -0.67
DDX39B-202ENST00000396172 PHKA2P46019 1235 aa10.89□□□□□ -0.67
DDX39B-202ENST00000396172 CLCN3P51790 818 aa10.89□□□□□ -0.67
DDX39B-202ENST00000396172 EFNA5P52803 228 aa10.89□□□□□ -0.67
DDX39B-202ENST00000396172 NCKAP1LP55160 1127 aa10.89□□□□□ -0.67
DDX39B-202ENST00000396172 PTK7Q13308 1070 aa10.89□□□□□ -0.67
DDX39B-202ENST00000396172 PTGISQ16647 500 aa10.89□□□□□ -0.67
DDX39B-202ENST00000396172 LRRC71Q8N4P6 559 aa10.89□□□□□ -0.67
DDX39B-202ENST00000396172 DEPTORQ8TB45 409 aa10.89□□□□□ -0.67
DDX39B-202ENST00000396172 KCNN1Q92952 543 aa10.89□□□□□ -0.67
DDX39B-202ENST00000396172 TMEM143Q96AN5 459 aa10.89□□□□□ -0.67
DDX39B-202ENST00000396172 GPRC5CQ9NQ84 441 aa10.89□□□□□ -0.67
DDX39B-202ENST00000396172 RALGAPA2Q2PPJ7 1873 aa10.89□□□□□ -0.67
DDX39B-202ENST00000396172 LRRIQ4A6NIV6 560 aa10.88□□□□□ -0.67
DDX39B-202ENST00000396172 CCDC169A6NNP5 214 aa10.88□□□□□ -0.67
DDX39B-202ENST00000396172 PSMA7O14818 248 aa10.88□□□□□ -0.67
DDX39B-202ENST00000396172 TREHO43280 583 aa10.88□□□□□ -0.67
DDX39B-202ENST00000396172 GCNT3O95395 438 aa10.88□□□□□ -0.67
DDX39B-202ENST00000396172 GLRA2P23416 452 aa10.88□□□□□ -0.67
DDX39B-202ENST00000396172 PEX3P56589 373 aa10.88□□□□□ -0.67
DDX39B-202ENST00000396172 LAMTOR4Q0VGL1 99 aa10.88□□□□□ -0.67
DDX39B-202ENST00000396172 C1orf53Q5VUE5 145 aa10.88□□□□□ -0.67
DDX39B-202ENST00000396172 GDF6Q6KF10 455 aaPredicted RBP10.88□□□□□ -0.67
DDX39B-202ENST00000396172 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.88□□□□□ -0.67
DDX39B-202ENST00000396172 RPAINQ86UA6 219 aa10.88□□□□□ -0.67
DDX39B-202ENST00000396172 SERINC5Q86VE9 423 aa10.88□□□□□ -0.67
DDX39B-202ENST00000396172 RHPN2Q8IUC4 686 aa10.88□□□□□ -0.67
DDX39B-202ENST00000396172 GUF1Q8N442 669 aaKnown RBP10.88□□□□□ -0.67
DDX39B-202ENST00000396172 SCLT1Q96NL6 688 aa10.88□□□□□ -0.67
DDX39B-202ENST00000396172 NTPCRQ9BSD7 190 aaKnown RBP10.88□□□□□ -0.67
DDX39B-202ENST00000396172 NFKBIZQ9BYH8 718 aa10.88□□□□□ -0.67
DDX39B-202ENST00000396172 C11orf49Q9H6J7 331 aa10.88□□□□□ -0.67
DDX39B-202ENST00000396172 EXOC7Q9UPT5 735 aa10.88□□□□□ -0.67
DDX39B-202ENST00000396172 NPTX2P47972 431 aa10.88□□□□□ -0.67
DDX39B-202ENST00000396172 CAPSQ13938 189 aa10.88□□□□□ -0.67
DDX39B-202ENST00000396172 PCBP1Q15365 356 aaKnown RBP eCLIP10.88□□□□□ -0.671e-6■■□□□ 14.4
DDX39B-202ENST00000396172 CDCA2Q69YH5 1023 aaPredicted RBP10.88□□□□□ -0.67
DDX39B-202ENST00000396172 NECAB2Q7Z6G3 386 aa10.88□□□□□ -0.67
DDX39B-202ENST00000396172 MYOCDQ8IZQ8 938 aa10.88□□□□□ -0.67
DDX39B-202ENST00000396172 ASAP3Q8TDY4 903 aa10.88□□□□□ -0.67
DDX39B-202ENST00000396172 PRPF31Q8WWY3 499 aaKnown RBP10.88□□□□□ -0.67
DDX39B-202ENST00000396172 PDLIM2Q96JY6 352 aa10.88□□□□□ -0.67
DDX39B-202ENST00000396172 INO80BQ9C086 356 aaPredicted RBP10.88□□□□□ -0.67
DDX39B-202ENST00000396172 SENP6Q9GZR1 1112 aaPredicted RBP10.88□□□□□ -0.67
DDX39B-202ENST00000396172 RBSNQ9H1K0 784 aa10.88□□□□□ -0.67
DDX39B-202ENST00000396172 TSPY26PQ9H489 355 aa10.88□□□□□ -0.67
DDX39B-202ENST00000396172 SLC39A2Q9NP94 309 aa10.88□□□□□ -0.67
DDX39B-202ENST00000396172 GRIN2DO15399 1336 aa10.88□□□□□ -0.67
DDX39B-202ENST00000396172 BICDL2A1A5D9 508 aa10.87□□□□□ -0.67
DDX39B-202ENST00000396172 OFD1O75665 1012 aa10.87□□□□□ -0.67
DDX39B-202ENST00000396172 COL6A1P12109 1028 aa10.87□□□□□ -0.67
DDX39B-202ENST00000396172 STRN3Q13033 797 aa10.87□□□□□ -0.67
DDX39B-202ENST00000396172 SNX17Q15036 470 aa10.87□□□□□ -0.67
DDX39B-202ENST00000396172 BMT2Q1RMZ1 405 aa10.87□□□□□ -0.67
DDX39B-202ENST00000396172 HAUS6Q7Z4H7 955 aa10.87□□□□□ -0.67
DDX39B-202ENST00000396172 IFNLR1Q8IU57 520 aaPredicted RBP10.87□□□□□ -0.67
DDX39B-202ENST00000396172 KIAA0319LQ8IZA0 1049 aa10.87□□□□□ -0.67
DDX39B-202ENST00000396172 RNF149Q8NC42 400 aa10.87□□□□□ -0.67
DDX39B-202ENST00000396172 KIAA0895Q8NCT3 520 aa10.87□□□□□ -0.67
DDX39B-202ENST00000396172 CAGE1Q8TC20 777 aa10.87□□□□□ -0.67
DDX39B-202ENST00000396172 NLRP7Q8WX94 980 aa10.87□□□□□ -0.67
DDX39B-202ENST00000396172 DHTKD1Q96HY7 919 aaPredicted RBP10.87□□□□□ -0.67
DDX39B-202ENST00000396172 NLRP4Q96MN2 994 aa10.87□□□□□ -0.67
DDX39B-202ENST00000396172 FUCA2Q9BTY2 467 aa10.87□□□□□ -0.67
DDX39B-202ENST00000396172 FAM49AQ9H0Q0 323 aaPredicted RBP10.87□□□□□ -0.67
DDX39B-202ENST00000396172 TMEM134Q9H6X4 195 aa10.87□□□□□ -0.67
DDX39B-202ENST00000396172 TMEM206Q9H813 350 aa10.87□□□□□ -0.67
DDX39B-202ENST00000396172 ARHGAP28Q9P2N2 729 aa10.87□□□□□ -0.67
DDX39B-202ENST00000396172 PDCD11Q14690 1871 aaKnown RBP10.87□□□□□ -0.67
DDX39B-202ENST00000396172 SFI1A8K8P3 1242 aa10.87□□□□□ -0.67
DDX39B-202ENST00000396172 ERCC5P28715 1186 aaPredicted RBP10.87□□□□□ -0.67
DDX39B-202ENST00000396172 GPC3P51654 580 aa10.87□□□□□ -0.67
DDX39B-202ENST00000396172 SOX10P56693 466 aa10.87□□□□□ -0.67
DDX39B-202ENST00000396172 STK4Q13043 487 aa10.87□□□□□ -0.67
DDX39B-202ENST00000396172 MKRN4PQ13434 485 aaPredicted RBP10.87□□□□□ -0.67
DDX39B-202ENST00000396172 FOXR2Q6PJQ5 311 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms