RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 RANBP17Q9H2T7 1088 aaKnown RBP3.66□□□□□ -1.82
VPS13C-203ENST00000395896 PPCSQ9HAB8 311 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 COL24A1Q17RW2 1714 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 TOB1P50616 345 aaPredicted RBP3.66□□□□□ -1.82
VPS13C-203ENST00000395896 CYP2J2P51589 502 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 POU5F1Q01860 360 aaKnown RBP3.66□□□□□ -1.82
VPS13C-203ENST00000395896 RAD51AP2Q09MP3 1159 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 BFSP1Q12934 665 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 PPP1R7Q15435 360 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 CATSPER3Q86XQ3 398 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 CCDC117Q8IWD4 279 aaPredicted RBP3.66□□□□□ -1.82
VPS13C-203ENST00000395896 ABHD16BQ9H3Z7 469 aa3.66□□□□□ -1.82
VPS13C-203ENST00000395896 ATF5Q9Y2D1 282 aaPredicted RBP3.66□□□□□ -1.82
VPS13C-203ENST00000395896 KRT5P13647 590 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 ECE1P42892 770 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 CDKAL1Q5VV42 579 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 RRAGDQ9NQL2 400 aaPredicted RBP3.65□□□□□ -1.82
VPS13C-203ENST00000395896 EHD2Q9NZN4 543 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 POTEB3A0JP26 581 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 POTECB2RU33 542 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 DLATP10515 647 aaKnown RBP3.65□□□□□ -1.82
VPS13C-203ENST00000395896 SLC1A1P43005 524 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 MTA1Q13330 715 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 POTEBQ6S5H4 581 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 METTL7BQ6UX53 244 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 SPIRE2Q8WWL2 714 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 VCPIP1Q96JH7 1222 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 CENPHQ9H3R5 247 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 RPF1Q9H9Y2 349 aaKnown RBP3.65□□□□□ -1.82
VPS13C-203ENST00000395896 KCNMB3Q9NPA1 279 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 MRGBPQ9NV56 204 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 KIAA1257Q9ULG3 409 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 AGTPBP1Q9UPW5 1226 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 ZNFX1Q9P2E3 1918 aaKnown RBP3.65□□□□□ -1.82
VPS13C-203ENST00000395896 KIAA1551Q9HCM1 1747 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 PPP1R13BQ96KQ4 1090 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 CAMKK2Q96RR4 588 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 SLC38A7Q9NVC3 462 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 POTEFA5A3E0 1075 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 POTEIP0CG38 1075 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 STK4Q13043 487 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 TAF2Q6P1X5 1199 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 POTEGQ6S5H5 508 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 POTEEQ6S8J3 1075 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 TOGARAM2Q6ZUX3 1019 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 ABI1Q8IZP0 508 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 OXER1Q8TDS5 423 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 FRMD8Q9BZ67 464 aaPredicted RBP3.65□□□□□ -1.82
VPS13C-203ENST00000395896 CARD9Q9H257 536 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 VTA1Q9NP79 307 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 KIF28PB7ZC32 967 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 TRAPPC3O43617 180 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 TOM1L1O75674 476 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 CD19P15391 556 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 PEX3P56589 373 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 UBE2SQ16763 222 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 SH3RF1Q7Z6J0 888 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 NBPF3Q9H094 633 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 TMEM8AQ9HCN3 771 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 TAF6LQ9Y6J9 622 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 SLX4Q8IY92 1834 aa3.65□□□□□ -1.82
VPS13C-203ENST00000395896 PASKQ96RG2 1323 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 DDX39AO00148 427 aaKnown RBP3.65□□□□□ -1.83
VPS13C-203ENST00000395896 ATP1A3P13637 1013 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 CPT1AP50416 773 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 ZNF667Q5HYK9 610 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 OTOP1Q7RTM1 612 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 GSTA5Q7RTV2 222 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 NELFCDQ8IXH7 590 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 SOCS4Q8WXH5 440 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 ZNF408Q9H9D4 720 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 VWA5AO00534 786 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 ZBTB48P10074 688 aaPredicted RBP3.65□□□□□ -1.83
VPS13C-203ENST00000395896 PNPLA4P41247 253 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 VAMP7P51809 220 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 VSIG10LQ86VR7 867 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 CCDC50Q8IVM0 306 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 RBM41Q96IZ5 413 aaKnown RBP3.65□□□□□ -1.83
VPS13C-203ENST00000395896 GDAQ9Y2T3 454 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 ZBTB12Q9Y330 459 aaPredicted RBP3.65□□□□□ -1.83
VPS13C-203ENST00000395896 TARSL2A2RTX5 802 aaKnown RBP3.65□□□□□ -1.83
VPS13C-203ENST00000395896 GRID2IPA4D2P6 1211 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 DEFB132Q7Z7B7 95 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 DHX40Q8IX18 779 aaKnown RBP3.65□□□□□ -1.83
VPS13C-203ENST00000395896 MSL3Q8N5Y2 521 aaKnown RBP3.65□□□□□ -1.83
VPS13C-203ENST00000395896 RFFLQ8WZ73 363 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 PPP1R2P1Q96PQ5 205 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 APEX2Q9UBZ4 518 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 FRMPD4Q14CM0 1322 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 AP3B1O00203 1094 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 TLR3O15455 904 aaKnown RBP3.65□□□□□ -1.83
VPS13C-203ENST00000395896 DGKDQ16760 1214 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 ABRAQ8N0Z2 381 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 SEZ6LQ9BYH1 1024 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 ZNF518BQ9C0D4 1074 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 INCENPQ9NQS7 918 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 NUB1Q9Y5A7 615 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 TIAM2Q8IVF5 1701 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 TTC26A0AVF1 554 aa3.65□□□□□ -1.83
VPS13C-203ENST00000395896 IL18RAPO95256 599 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms