RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 HADHBP55084 474 aaKnown RBP11.2□□□□□ -0.62
HIF1A-203ENST00000394997 UBXN2AP68543 259 aa11.2□□□□□ -0.62
HIF1A-203ENST00000394997 RASSF7Q02833 373 aa11.2□□□□□ -0.62
HIF1A-203ENST00000394997 FAM133AQ8N9E0 248 aa11.2□□□□□ -0.62
HIF1A-203ENST00000394997 TRIM58Q8NG06 486 aa11.2□□□□□ -0.62
HIF1A-203ENST00000394997 DDX1Q92499 740 aaKnown RBP11.2□□□□□ -0.62
HIF1A-203ENST00000394997 CAVIN3Q969G5 261 aa11.2□□□□□ -0.62
HIF1A-203ENST00000394997 GRIN2DO15399 1336 aa11.2□□□□□ -0.62
HIF1A-203ENST00000394997 A0A0A6YYK5 440 aaPredicted RBP11.2□□□□□ -0.62
HIF1A-203ENST00000394997 IDEP14735 1019 aa11.2□□□□□ -0.62
HIF1A-203ENST00000394997 ATP4AP20648 1035 aa11.2□□□□□ -0.62
HIF1A-203ENST00000394997 MRPS25P82663 173 aaKnown RBP11.2□□□□□ -0.62
HIF1A-203ENST00000394997 MAATS1Q7Z4T9 603 aa11.2□□□□□ -0.62
HIF1A-203ENST00000394997 CD101Q93033 1021 aa11.2□□□□□ -0.62
HIF1A-203ENST00000394997 LXNQ9BS40 222 aa11.2□□□□□ -0.62
HIF1A-203ENST00000394997 EPB41L4BQ9H329 900 aa11.2□□□□□ -0.62
HIF1A-203ENST00000394997 ZSCAN5CA6NGD5 496 aaPredicted RBP11.19□□□□□ -0.62
HIF1A-203ENST00000394997 ATP2A1O14983 1001 aa11.19□□□□□ -0.62
HIF1A-203ENST00000394997 KRT86O43790 486 aa11.19□□□□□ -0.62
HIF1A-203ENST00000394997 ZNF862O60290 1169 aa11.19□□□□□ -0.62
HIF1A-203ENST00000394997 FAM189A1O60320 539 aa11.19□□□□□ -0.62
HIF1A-203ENST00000394997 KCNA2P16389 499 aa11.19□□□□□ -0.62
HIF1A-203ENST00000394997 TUBB4BP68371 445 aa11.19□□□□□ -0.62
HIF1A-203ENST00000394997 PPP3CAQ08209 521 aa11.19□□□□□ -0.62
HIF1A-203ENST00000394997 MYBPC2Q14324 1141 aa11.19□□□□□ -0.62
HIF1A-203ENST00000394997 FAM160B2Q86V87 743 aa11.19□□□□□ -0.62
HIF1A-203ENST00000394997 R3HDMLQ9H3Y0 253 aa11.19□□□□□ -0.62
HIF1A-203ENST00000394997 GOPCQ9HD26 462 aa11.19□□□□□ -0.62
HIF1A-203ENST00000394997 TAS2R14Q9NYV8 317 aa11.19□□□□□ -0.62
HIF1A-203ENST00000394997 NOCTQ9UK39 431 aaKnown RBP11.19□□□□□ -0.62
HIF1A-203ENST00000394997 DNM3Q9UQ16 869 aa11.19□□□□□ -0.62
HIF1A-203ENST00000394997 STK24Q9Y6E0 443 aa11.19□□□□□ -0.62
HIF1A-203ENST00000394997 MACROD2A1Z1Q3 448 aa11.19□□□□□ -0.62
HIF1A-203ENST00000394997 AFPP02771 609 aaKnown RBP11.19□□□□□ -0.62
HIF1A-203ENST00000394997 VCAM1P19320 739 aa11.19□□□□□ -0.62
HIF1A-203ENST00000394997 GBP2P32456 591 aaPredicted RBP11.19□□□□□ -0.62
HIF1A-203ENST00000394997 ANO5Q75V66 913 aa11.19□□□□□ -0.62
HIF1A-203ENST00000394997 NLRC4Q9NPP4 1024 aa11.19□□□□□ -0.62
HIF1A-203ENST00000394997 MAPK13O15264 365 aa11.19□□□□□ -0.62
HIF1A-203ENST00000394997 PALMO75781 387 aa11.19□□□□□ -0.62
HIF1A-203ENST00000394997 GNGT1P63211 74 aa11.19□□□□□ -0.62
HIF1A-203ENST00000394997 FSTL1Q12841 308 aa11.19□□□□□ -0.62
HIF1A-203ENST00000394997 HLTFQ14527 1009 aaKnown RBP eCLIP11.19□□□□□ -0.62
HIF1A-203ENST00000394997 LRCH2Q5VUJ6 765 aa11.19□□□□□ -0.62
HIF1A-203ENST00000394997 SND1Q7KZF4 910 aaKnown RBP eCLIP11.19□□□□□ -0.62
HIF1A-203ENST00000394997 RIN2Q8WYP3 895 aaPredicted RBP11.19□□□□□ -0.62
HIF1A-203ENST00000394997 NTPCRQ9BSD7 190 aaKnown RBP11.19□□□□□ -0.62
HIF1A-203ENST00000394997 NEUROG2Q9H2A3 272 aa11.19□□□□□ -0.62
HIF1A-203ENST00000394997 PPP1R9AQ9ULJ8 1098 aa11.19□□□□□ -0.62
HIF1A-203ENST00000394997 GOLGA6BA6NDN3 693 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 GCOM1H8Y6P7 765 aaPredicted RBP11.18□□□□□ -0.62
HIF1A-203ENST00000394997 IPO5O00410 1097 aaKnown RBP11.18□□□□□ -0.62
HIF1A-203ENST00000394997 ADRB2P07550 413 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 POLR2MP0CAP2 368 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 FMO5P49326 533 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 NAA25Q14CX7 972 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 CCDC174Q6PII3 467 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 DEFB132Q7Z7B7 95 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 NT5DC3Q86UY8 548 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 TPCN2Q8NHX9 752 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 ATP8B4Q8TF62 1192 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 FGD4Q96M96 766 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 MAP3K20Q9NYL2 800 aaKnown RBP11.18□□□□□ -0.62
HIF1A-203ENST00000394997 TTC7AQ9ULT0 858 aaPredicted RBP11.18□□□□□ -0.62
HIF1A-203ENST00000394997 COQ4Q9Y3A0 265 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 ZNF541Q9H0D2 1346 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 WDR46O15213 610 aaKnown RBP11.18□□□□□ -0.62
HIF1A-203ENST00000394997 ECM2O94769 699 aaPredicted RBP11.18□□□□□ -0.62
HIF1A-203ENST00000394997 GAP43P17677 238 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 MCM3P25205 808 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 SP2Q02086 613 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 FAM71BQ8TC56 605 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 RPGRIP1Q96KN7 1286 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 TAAR1Q96RJ0 339 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 NCAPGQ9BPX3 1015 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 MMRN2Q9H8L6 949 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 NR2E1Q9Y466 385 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.18□□□□□ -0.62
HIF1A-203ENST00000394997 HIP1RO75146 1068 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 FAM153BP0C7A2 387 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 ANXA13P27216 316 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 HPDP32754 393 aaPredicted RBP11.18□□□□□ -0.62
HIF1A-203ENST00000394997 HIRAP54198 1017 aaPredicted RBP11.18□□□□□ -0.62
HIF1A-203ENST00000394997 MOGSQ13724 837 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 SIX1Q15475 284 aaPredicted RBP11.18□□□□□ -0.62
HIF1A-203ENST00000394997 FAM153CQ494X1 144 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 SFMBT2Q5VUG0 894 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 KCTD16Q68DU8 428 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 TADA2BQ86TJ2 420 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 ARHGEF19Q8IW93 802 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 MREGQ8N565 214 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 CCDC114Q96M63 670 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 CCDC42Q96M95 316 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 PXMP2Q9NR77 195 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 SEL1LQ9UBV2 794 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 FAM153AQ9UHL3 310 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 CEP350Q5VT06 3117 aa11.18□□□□□ -0.62
HIF1A-203ENST00000394997 IGKV6D-21A0A0A0MT36 114 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 SPDYE3A6NKU9 549 aa11.17□□□□□ -0.62
HIF1A-203ENST00000394997 VWA5AO00534 786 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms