RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 DRP2Q13474 957 aa23.82■■□□□ 1.4
TRAF4-203ENST00000394925 BMS1Q14692 1282 aaKnown RBP23.82■■□□□ 1.4
TRAF4-203ENST00000394925 GJA10Q969M2 543 aa23.82■■□□□ 1.4
TRAF4-203ENST00000394925 TMEM169Q96HH4 297 aa23.82■■□□□ 1.4
TRAF4-203ENST00000394925 CCDC136Q96JN2 1154 aa23.82■■□□□ 1.4
TRAF4-203ENST00000394925 UNC45AQ9H3U1 944 aa23.82■■□□□ 1.4
TRAF4-203ENST00000394925 SORCS3Q9UPU3 1222 aa23.82■■□□□ 1.4
TRAF4-203ENST00000394925 H0Y858 1186 aa23.81■■□□□ 1.4
TRAF4-203ENST00000394925 EDIL3O43854 480 aa23.81■■□□□ 1.4
TRAF4-203ENST00000394925 BRD1O95696 1058 aa23.81■■□□□ 1.4
TRAF4-203ENST00000394925 MTMR3Q13615 1198 aa23.81■■□□□ 1.4
TRAF4-203ENST00000394925 RARS2Q5T160 578 aaKnown RBP23.81■■□□□ 1.4
TRAF4-203ENST00000394925 UBALD2Q8IYN6 164 aa23.81■■□□□ 1.4
TRAF4-203ENST00000394925 VPS52Q8N1B4 723 aa23.81■■□□□ 1.4
TRAF4-203ENST00000394925 C12orf76Q8N812 135 aaPredicted RBP23.81■■□□□ 1.4
TRAF4-203ENST00000394925 TMEM87AQ8NBN3 555 aa23.81■■□□□ 1.4
TRAF4-203ENST00000394925 RIT2Q99578 217 aa23.81■■□□□ 1.4
TRAF4-203ENST00000394925 TEKT3Q9BXF9 490 aa23.81■■□□□ 1.4
TRAF4-203ENST00000394925 GCOM2Q9BZD3 368 aaPredicted RBP23.81■■□□□ 1.4
TRAF4-203ENST00000394925 ZC3H11AO75152 810 aaKnown RBP eCLIP23.8■■□□□ 1.4
TRAF4-203ENST00000394925 SFNP31947 248 aa23.8■■□□□ 1.4
TRAF4-203ENST00000394925 MTHFRP42898 656 aa23.8■■□□□ 1.4
TRAF4-203ENST00000394925 JAK3P52333 1124 aa23.8■■□□□ 1.4
TRAF4-203ENST00000394925 TARBP2Q15633 366 aaKnown RBP23.8■■□□□ 1.4
TRAF4-203ENST00000394925 LONRF3Q496Y0 759 aa23.8■■□□□ 1.4
TRAF4-203ENST00000394925 MTERF2Q49AM1 385 aa23.8■■□□□ 1.4
TRAF4-203ENST00000394925 LRCH2Q5VUJ6 765 aa23.8■■□□□ 1.4
TRAF4-203ENST00000394925 KANK3Q6NY19 840 aa23.8■■□□□ 1.4
TRAF4-203ENST00000394925 CCDC148Q8NFR7 591 aa23.8■■□□□ 1.4
TRAF4-203ENST00000394925 AUTS2Q8WXX7 1259 aa23.8■■□□□ 1.4
TRAF4-203ENST00000394925 SLC5A5Q92911 643 aa23.8■■□□□ 1.4
TRAF4-203ENST00000394925 SMOC2Q9H3U7 446 aa23.8■■□□□ 1.4
TRAF4-203ENST00000394925 VPS54Q9P1Q0 977 aa23.8■■□□□ 1.4
TRAF4-203ENST00000394925 SEPT9Q9UHD8 586 aaPredicted RBP23.8■■□□□ 1.4
TRAF4-203ENST00000394925 PTPRZ1P23471 2315 aaPredicted RBP23.79■■□□□ 1.4
TRAF4-203ENST00000394925 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.79■■□□□ 1.4
TRAF4-203ENST00000394925 PHKA2P46019 1235 aa23.79■■□□□ 1.4
TRAF4-203ENST00000394925 TMEM173Q86WV6 379 aaPredicted RBP23.79■■□□□ 1.4
TRAF4-203ENST00000394925 LPPQ93052 612 aa23.79■■□□□ 1.4
TRAF4-203ENST00000394925 JAKMIP1Q96N16 626 aaKnown RBP23.79■■□□□ 1.4
TRAF4-203ENST00000394925 SLC26A6Q9BXS9 759 aa23.79■■□□□ 1.4
TRAF4-203ENST00000394925 ZBP1Q9H171 429 aa23.79■■□□□ 1.4
TRAF4-203ENST00000394925 CHST12Q9NRB3 414 aa23.79■■□□□ 1.4
TRAF4-203ENST00000394925 NID2Q14112 1375 aa23.78■■□□□ 1.4
TRAF4-203ENST00000394925 A0A087WZ62 844 aa23.78■■□□□ 1.4
TRAF4-203ENST00000394925 TMEM150BA6NC51 233 aa23.78■■□□□ 1.4
TRAF4-203ENST00000394925 ASGR2P07307 311 aa23.78■■□□□ 1.4
TRAF4-203ENST00000394925 USP11P51784 963 aa23.78■■□□□ 1.4
TRAF4-203ENST00000394925 TWF2Q6IBS0 349 aaKnown RBP23.78■■□□□ 1.4
TRAF4-203ENST00000394925 SH2D3AQ9BRG2 576 aa23.78■■□□□ 1.4
TRAF4-203ENST00000394925 FDXACB1Q9BRP7 624 aaPredicted RBP23.78■■□□□ 1.4
TRAF4-203ENST00000394925 MYO15AQ9UKN7 3530 aa23.77■■□□□ 1.4
TRAF4-203ENST00000394925 GALR2O43603 387 aaPredicted RBP23.77■■□□□ 1.4
TRAF4-203ENST00000394925 CDC45O75419 566 aa23.77■■□□□ 1.4
TRAF4-203ENST00000394925 EPCAMP16422 314 aa23.77■■□□□ 1.4
TRAF4-203ENST00000394925 NUBP1P53384 320 aa23.77■■□□□ 1.4
TRAF4-203ENST00000394925 CDC42EP1Q00587 391 aa23.77■■□□□ 1.4
TRAF4-203ENST00000394925 NTRK3Q16288 839 aa23.77■■□□□ 1.4
TRAF4-203ENST00000394925 ATAT1Q5SQI0 421 aa23.77■■□□□ 1.4
TRAF4-203ENST00000394925 BLOC1S2Q6QNY1 142 aa23.77■■□□□ 1.4
TRAF4-203ENST00000394925 MIER3Q7Z3K6 550 aa23.77■■□□□ 1.4
TRAF4-203ENST00000394925 TDRD5Q8NAT2 981 aaKnown RBP23.77■■□□□ 1.4
TRAF4-203ENST00000394925 RNF26Q9BY78 433 aaPredicted RBP23.77■■□□□ 1.4
TRAF4-203ENST00000394925 NIFKQ9BYG3 293 aaKnown RBP23.77■■□□□ 1.4
TRAF4-203ENST00000394925 DZANK1Q9NVP4 752 aa23.77■■□□□ 1.4
TRAF4-203ENST00000394925 LIMD1Q9UGP4 676 aa23.77■■□□□ 1.4
TRAF4-203ENST00000394925 DBR1Q9UK59 544 aaKnown RBP23.77■■□□□ 1.4
TRAF4-203ENST00000394925 INPP5FQ9Y2H2 1132 aa23.77■■□□□ 1.4
TRAF4-203ENST00000394925 CTSAP10619 480 aa23.76■■□□□ 1.39
TRAF4-203ENST00000394925 SFPQP23246 707 aaKnown RBP eCLIP23.76■■□□□ 1.39
TRAF4-203ENST00000394925 DNM2P50570 870 aa23.76■■□□□ 1.39
TRAF4-203ENST00000394925 XKR3Q5GH77 459 aa23.76■■□□□ 1.39
TRAF4-203ENST00000394925 KIAA1841Q6NSI8 718 aa23.76■■□□□ 1.39
TRAF4-203ENST00000394925 IGSF21Q96ID5 467 aa23.76■■□□□ 1.39
TRAF4-203ENST00000394925 SNX27Q96L92 541 aa23.76■■□□□ 1.39
TRAF4-203ENST00000394925 NRDE2Q9H7Z3 1164 aa23.76■■□□□ 1.39
TRAF4-203ENST00000394925 PIN4Q9Y237 131 aaKnown RBP23.76■■□□□ 1.39
TRAF4-203ENST00000394925 RIF1Q5UIP0 2472 aaKnown RBP23.75■■□□□ 1.39
TRAF4-203ENST00000394925 PLXNA3P51805 1871 aa23.75■■□□□ 1.39
TRAF4-203ENST00000394925 MEIS3P2A8K0S8 358 aa23.75■■□□□ 1.39
TRAF4-203ENST00000394925 PSMD10O75832 226 aa23.75■■□□□ 1.39
TRAF4-203ENST00000394925 STBD1O95210 358 aa23.75■■□□□ 1.39
TRAF4-203ENST00000394925 POLGP54098 1239 aaPredicted RBP23.75■■□□□ 1.39
TRAF4-203ENST00000394925 NLRP5P59047 1200 aa23.75■■□□□ 1.39
TRAF4-203ENST00000394925 RNASELQ05823 741 aaKnown RBP23.75■■□□□ 1.39
TRAF4-203ENST00000394925 NOMO2Q5JPE7 1267 aa23.75■■□□□ 1.39
TRAF4-203ENST00000394925 GLB1LQ6UWU2 654 aa23.75■■□□□ 1.39
TRAF4-203ENST00000394925 DDX53Q86TM3 631 aaKnown RBP23.75■■□□□ 1.39
TRAF4-203ENST00000394925 RHPN2Q8IUC4 686 aa23.75■■□□□ 1.39
TRAF4-203ENST00000394925 ZDHHC14Q8IZN3 488 aa23.75■■□□□ 1.39
TRAF4-203ENST00000394925 TMEM105Q8N8V8 129 aa23.75■■□□□ 1.39
TRAF4-203ENST00000394925 RDM1Q8NG50 284 aa23.75■■□□□ 1.39
TRAF4-203ENST00000394925 TBCKQ8TEA7 893 aa23.75■■□□□ 1.39
TRAF4-203ENST00000394925 SLC22A17Q8WUG5 538 aa23.75■■□□□ 1.39
TRAF4-203ENST00000394925 BCL7CQ8WUZ0 217 aaPredicted RBP23.75■■□□□ 1.39
TRAF4-203ENST00000394925 KCNB2Q92953 911 aa23.75■■□□□ 1.39
TRAF4-203ENST00000394925 CEP89Q96ST8 783 aa23.75■■□□□ 1.39
TRAF4-203ENST00000394925 TRAIPQ9BWF2 469 aa23.75■■□□□ 1.39
TRAF4-203ENST00000394925 GBP3Q9H0R5 595 aa23.75■■□□□ 1.39
TRAF4-203ENST00000394925 TBC1D13Q9NVG8 400 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms