RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 KIAA1755Q5JYT7 1200 aa10.87□□□□□ -0.67
UBE2D3-208ENST00000394803 SEL1L2Q5TEA6 688 aa10.87□□□□□ -0.67
UBE2D3-208ENST00000394803 DDX42Q86XP3 938 aaKnown RBP eCLIP10.87□□□□□ -0.674e-7■■■□□ 18.4
UBE2D3-208ENST00000394803 COL23A1Q86Y22 540 aaPredicted RBP10.87□□□□□ -0.67
UBE2D3-208ENST00000394803 MYCT1Q8N699 235 aa10.87□□□□□ -0.67
UBE2D3-208ENST00000394803 BORCS6Q96GS4 357 aa10.87□□□□□ -0.67
UBE2D3-208ENST00000394803 SGSM3Q96HU1 749 aa10.87□□□□□ -0.67
UBE2D3-208ENST00000394803 GMCL1Q96IK5 515 aa10.87□□□□□ -0.67
UBE2D3-208ENST00000394803 XPO6Q96QU8 1125 aaKnown RBP10.87□□□□□ -0.67
UBE2D3-208ENST00000394803 RPS6KC1Q96S38 1066 aa10.87□□□□□ -0.67
UBE2D3-208ENST00000394803 EIF2AK1Q9BQI3 630 aaKnown RBP10.87□□□□□ -0.67
UBE2D3-208ENST00000394803 TXLNGYQ9BZA5 131 aa10.87□□□□□ -0.67
UBE2D3-208ENST00000394803 TMX4Q9H1E5 349 aaPredicted RBP10.87□□□□□ -0.67
UBE2D3-208ENST00000394803 NEUROG2Q9H2A3 272 aa10.87□□□□□ -0.67
UBE2D3-208ENST00000394803 BHMT2Q9H2M3 363 aa10.87□□□□□ -0.67
UBE2D3-208ENST00000394803 DPH5Q9H2P9 285 aa10.87□□□□□ -0.67
UBE2D3-208ENST00000394803 SLC40A1Q9NP59 571 aa10.87□□□□□ -0.67
UBE2D3-208ENST00000394803 SAMD15Q9P1V8 674 aa10.87□□□□□ -0.67
UBE2D3-208ENST00000394803 PIK3CDO00329 1044 aa10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 DDX3YO15523 660 aaKnown RBP10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 MAPK7Q13164 816 aa10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 NEDD9Q14511 834 aa10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 ERMARDQ5T6L9 678 aa10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 TMEM179Q6ZVK1 233 aa10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 SLC9A9Q8IVB4 645 aa10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 OR2W6PQ8NHA6 318 aa10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 GIMAP7Q8NHV1 300 aa10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 LNX1Q8TBB1 728 aaPredicted RBP10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 GJA10Q969M2 543 aa10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 ZC3H12CQ9C0D7 883 aaKnown RBP10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 INTS2Q9H0H0 1204 aaKnown RBP10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 GOPCQ9HD26 462 aa10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 POLLQ9UGP5 575 aa10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 ATP8A1Q9Y2Q0 1164 aa10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 FRMPD4Q14CM0 1322 aa10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 LTBP1Q14766 1721 aa10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 MEIS1O00470 390 aa10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 RGS16O15492 202 aaPredicted RBP10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 NPM3O75607 178 aaKnown RBP10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 ITGA4P13612 1032 aa10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 EZRP15311 586 aaKnown RBP10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 CERKLQ49MI3 558 aaPredicted RBP10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 SYDE2Q5VT97 1194 aa10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 RINT1Q6NUQ1 792 aa10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 GLYCTKQ8IVS8 523 aa10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 PARP9Q8IXQ6 854 aa10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 NACC1Q96RE7 527 aa10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 PLCD4Q9BRC7 762 aa10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 MRIQ9BWK5 157 aa10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 WDR11Q9BZH6 1224 aa10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 ROPN1BQ9BZX4 212 aaPredicted RBP10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 WNT8AQ9H1J5 351 aa10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 ROPN1Q9HAT0 212 aaPredicted RBP10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 DDX4Q9NQI0 724 aaKnown RBP10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 PI4KBQ9UBF8 816 aa10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 PCYOX1Q9UHG3 505 aa10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 VAV3Q9UKW4 847 aa10.86□□□□□ -0.67
UBE2D3-208ENST00000394803 CLIC2O15247 247 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 MSH4O15457 936 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 TGFB1I1O43294 461 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 CTNND1O60716 968 aaKnown RBP10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 SERPINB2P05120 415 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 EEF2P13639 858 aaKnown RBP10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 SNRPFP62306 86 aaKnown RBP10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 PSMC6P62333 389 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 XRCC4Q13426 336 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 CYFIP1Q7L576 1253 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 JAMLQ86YT9 394 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 FAM178BQ8IXR5 827 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 LENG9Q96B70 501 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 SYT11Q9BT88 431 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 GOLPH3Q9H4A6 298 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 CCDC134Q9H6E4 229 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 EP400Q96L91 3159 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 CFAP73A6NFT4 308 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 G3V3G9 751 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 PPEF1O14829 653 aaPredicted RBP10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 DRD4P21917 467 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 MAN1A1P33908 653 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 MMP13P45452 471 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 CASP4P49662 377 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 ICA1Q05084 483 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 IKQ13123 557 aaPredicted RBP10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 PPP2R5CQ13362 524 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 DCAF8Q5TAQ9 597 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 MSL1Q68DK7 614 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 CDC42EP5Q6NZY7 148 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 CYB5D1Q6P9G0 228 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 INTS8Q75QN2 995 aaKnown RBP10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 CLEC10AQ8IUN9 316 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 ATP8B4Q8TF62 1192 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 TMEM174Q8WUU8 243 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 MAIP1Q8WWC4 291 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 AGPAT1Q99943 283 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 RUSC1Q9BVN2 902 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 TMEM206Q9H813 350 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 HOMER3Q9NSC5 361 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 ZDHHC18Q9NUE0 388 aa10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 SEPT11Q9NVA2 429 aaKnown RBP10.85□□□□□ -0.67
UBE2D3-208ENST00000394803 PASKQ96RG2 1323 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms