RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 PPP1R12BO60237 982 aaPredicted RBP16.44■□□□□ 0.22
GPC3-202ENST00000394299 ZRANB2O95218 330 aaKnown RBP eCLIP16.44■□□□□ 0.22
GPC3-202ENST00000394299 NPTX2P47972 431 aa16.44■□□□□ 0.22
GPC3-202ENST00000394299 DNA2P51530 1060 aa16.44■□□□□ 0.22
GPC3-202ENST00000394299 JAM2P57087 298 aa16.44■□□□□ 0.22
GPC3-202ENST00000394299 GTF2BQ00403 316 aa16.44■□□□□ 0.22
GPC3-202ENST00000394299 BFSP1Q12934 665 aa16.44■□□□□ 0.22
GPC3-202ENST00000394299 KIAA0753Q2KHM9 967 aa16.44■□□□□ 0.22
GPC3-202ENST00000394299 TMCO3Q6UWJ1 677 aa16.44■□□□□ 0.22
GPC3-202ENST00000394299 TRIM58Q8NG06 486 aa16.44■□□□□ 0.22
GPC3-202ENST00000394299 PAGR1Q9BTK6 254 aa16.44■□□□□ 0.22
GPC3-202ENST00000394299 OGFRQ9NZT2 677 aa16.44■□□□□ 0.22
GPC3-202ENST00000394299 SLC9A2Q9UBY0 812 aa16.44■□□□□ 0.22
GPC3-202ENST00000394299 ADSSP30520 456 aa16.44■□□□□ 0.22
GPC3-202ENST00000394299 PPP3CAQ08209 521 aa16.44■□□□□ 0.22
GPC3-202ENST00000394299 CC2D1AQ6P1N0 951 aaPredicted RBP16.44■□□□□ 0.22
GPC3-202ENST00000394299 XRRA1Q6P2D8 792 aa16.44■□□□□ 0.22
GPC3-202ENST00000394299 LBX2Q6XYB7 198 aa16.44■□□□□ 0.22
GPC3-202ENST00000394299 EEPD1Q7L9B9 569 aa16.44■□□□□ 0.22
GPC3-202ENST00000394299 ELMO3Q96BJ8 720 aa16.44■□□□□ 0.22
GPC3-202ENST00000394299 ST7Q9NRC1 585 aa16.44■□□□□ 0.22
GPC3-202ENST00000394299 ANKEF1Q9NU02 776 aa16.44■□□□□ 0.22
GPC3-202ENST00000394299 HSPBP1Q9NZL4 362 aa16.44■□□□□ 0.22
GPC3-202ENST00000394299 DNAJC12Q9UKB3 198 aa16.44■□□□□ 0.22
GPC3-202ENST00000394299 CSADQ9Y600 493 aa16.44■□□□□ 0.22
GPC3-202ENST00000394299 KIAA1217Q5T5P2 1943 aa16.44■□□□□ 0.22
GPC3-202ENST00000394299 PFASO15067 1338 aa16.44■□□□□ 0.22
GPC3-202ENST00000394299 SPATA31C2B4DYI2 1134 aa16.43■□□□□ 0.22
GPC3-202ENST00000394299 GCLMP48507 274 aa16.43■□□□□ 0.22
GPC3-202ENST00000394299 ARHGAP44Q17R89 818 aa16.43■□□□□ 0.22
GPC3-202ENST00000394299 C1orf220Q5T0J3 134 aa16.43■□□□□ 0.22
GPC3-202ENST00000394299 PHLDB3Q6NSJ2 640 aa16.43■□□□□ 0.22
GPC3-202ENST00000394299 SLC9A9Q8IVB4 645 aa16.43■□□□□ 0.22
GPC3-202ENST00000394299 TMEM161BQ8NDZ6 487 aa16.43■□□□□ 0.22
GPC3-202ENST00000394299 SAAL1Q96ER3 474 aa16.43■□□□□ 0.22
GPC3-202ENST00000394299 TMEM206Q9H813 350 aa16.43■□□□□ 0.22
GPC3-202ENST00000394299 ARGLU1Q9NWB6 273 aaPredicted RBP16.43■□□□□ 0.22
GPC3-202ENST00000394299 SEPT9Q9UHD8 586 aaPredicted RBP16.43■□□□□ 0.22
GPC3-202ENST00000394299 JRKLQ9Y4A0 524 aa16.43■□□□□ 0.22
GPC3-202ENST00000394299 MAFGO15525 162 aa16.43■□□□□ 0.22
GPC3-202ENST00000394299 SASH3O75995 380 aa16.43■□□□□ 0.22
GPC3-202ENST00000394299 MRPS25P82663 173 aaKnown RBP16.43■□□□□ 0.22
GPC3-202ENST00000394299 DRAP1Q14919 205 aaPredicted RBP16.43■□□□□ 0.22
GPC3-202ENST00000394299 PTPROQ16827 1216 aa16.43■□□□□ 0.22
GPC3-202ENST00000394299 C9orf131Q5VYM1 1079 aa16.43■□□□□ 0.22
GPC3-202ENST00000394299 ABHD15Q6UXT9 468 aa16.43■□□□□ 0.22
GPC3-202ENST00000394299 EMSYQ7Z589 1322 aa16.43■□□□□ 0.22
GPC3-202ENST00000394299 NCAPG2Q86XI2 1143 aa16.43■□□□□ 0.22
GPC3-202ENST00000394299 ADGRA3Q8IWK6 1321 aa16.43■□□□□ 0.22
GPC3-202ENST00000394299 FAM84AQ96KN4 292 aa16.43■□□□□ 0.22
GPC3-202ENST00000394299 SENP7Q9BQF6 1050 aa16.43■□□□□ 0.22
GPC3-202ENST00000394299 INTS2Q9H0H0 1204 aaKnown RBP16.43■□□□□ 0.22
GPC3-202ENST00000394299 GOLPH3Q9H4A6 298 aa16.43■□□□□ 0.22
GPC3-202ENST00000394299 PRDM10Q9NQV6 1147 aa16.43■□□□□ 0.22
GPC3-202ENST00000394299 SNX12Q9UMY4 172 aa16.43■□□□□ 0.22
GPC3-202ENST00000394299 PACSIN2Q9UNF0 486 aaPredicted RBP16.43■□□□□ 0.22
GPC3-202ENST00000394299 DENND3A2RUS2 1198 aa16.42■□□□□ 0.22
GPC3-202ENST00000394299 GTPBP10A4D1E9 387 aaKnown RBP16.42■□□□□ 0.22
GPC3-202ENST00000394299 FTCDO95954 541 aa16.42■□□□□ 0.22
GPC3-202ENST00000394299 ATP4AP20648 1035 aa16.42■□□□□ 0.22
GPC3-202ENST00000394299 NCKAP1LP55160 1127 aa16.42■□□□□ 0.22
GPC3-202ENST00000394299 PRKCEQ02156 737 aa16.42■□□□□ 0.22
GPC3-202ENST00000394299 CBWD2Q8IUF1 395 aa16.42■□□□□ 0.22
GPC3-202ENST00000394299 CREG2Q8IUH2 290 aa16.42■□□□□ 0.22
GPC3-202ENST00000394299 LMO3Q8TAP4 145 aa16.42■□□□□ 0.22
GPC3-202ENST00000394299 POP1Q99575 1024 aaKnown RBP16.42■□□□□ 0.22
GPC3-202ENST00000394299 SYT17Q9BSW7 474 aa16.42■□□□□ 0.22
GPC3-202ENST00000394299 GPR88Q9GZN0 384 aa16.42■□□□□ 0.22
GPC3-202ENST00000394299 SUGCTQ9HAC7 445 aa16.42■□□□□ 0.22
GPC3-202ENST00000394299 XPNPEP1Q9NQW7 623 aa16.42■□□□□ 0.22
GPC3-202ENST00000394299 SBF1O95248 1867 aa16.42■□□□□ 0.22
GPC3-202ENST00000394299 ANO9A1A5B4 782 aa16.42■□□□□ 0.22
GPC3-202ENST00000394299 EVI5O60447 810 aa16.42■□□□□ 0.22
GPC3-202ENST00000394299 PALMO75781 387 aa16.42■□□□□ 0.22
GPC3-202ENST00000394299 ADRB2P07550 413 aa16.42■□□□□ 0.22
GPC3-202ENST00000394299 PSAPP07602 524 aa16.42■□□□□ 0.22
GPC3-202ENST00000394299 MAPTP10636 758 aaKnown RBP16.42■□□□□ 0.22
GPC3-202ENST00000394299 VAMP7P51809 220 aa16.42■□□□□ 0.22
GPC3-202ENST00000394299 VSNL1P62760 191 aa16.42■□□□□ 0.22
GPC3-202ENST00000394299 MYL7Q01449 175 aa16.42■□□□□ 0.22
GPC3-202ENST00000394299 TTLL12Q14166 644 aaPredicted RBP16.42■□□□□ 0.22
GPC3-202ENST00000394299 MTERF2Q49AM1 385 aa16.42■□□□□ 0.22
GPC3-202ENST00000394299 GOLGA5Q8TBA6 731 aa16.42■□□□□ 0.22
GPC3-202ENST00000394299 TLR10Q9BXR5 811 aa16.42■□□□□ 0.22
GPC3-202ENST00000394299 NAGPAQ9UK23 515 aa16.42■□□□□ 0.22
GPC3-202ENST00000394299 TBX20Q9UMR3 447 aa16.42■□□□□ 0.22
GPC3-202ENST00000394299 SOWAHBA6NEL2 793 aa16.41■□□□□ 0.22
GPC3-202ENST00000394299 ZMYND10O75800 440 aa16.41■□□□□ 0.22
GPC3-202ENST00000394299 C2orf54Q08AI8 447 aa16.41■□□□□ 0.22
GPC3-202ENST00000394299 NAB2Q15742 525 aa16.41■□□□□ 0.22
GPC3-202ENST00000394299 STXBP2Q15833 593 aa16.41■□□□□ 0.22
GPC3-202ENST00000394299 XXYLT1Q8NBI6 393 aa16.41■□□□□ 0.22
GPC3-202ENST00000394299 CAGE1Q8TC20 777 aa16.41■□□□□ 0.22
GPC3-202ENST00000394299 NOX5Q96PH1 765 aa16.41■□□□□ 0.22
GPC3-202ENST00000394299 KMT5AQ9NQR1 393 aa16.41■□□□□ 0.22
GPC3-202ENST00000394299 DDX3XO00571 662 aaKnown RBP eCLIP16.41■□□□□ 0.221e-323■■■□□ 19
GPC3-202ENST00000394299 TBC1D8O95759 1140 aa16.41■□□□□ 0.22
GPC3-202ENST00000394299 KRT13P13646 458 aa16.41■□□□□ 0.22
GPC3-202ENST00000394299 CNGA1P29973 690 aa16.41■□□□□ 0.22
GPC3-202ENST00000394299 PPP2R5AQ15172 486 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms