RNA–Protein interactions for RNA: ENST00000394239.7

TUBD1-205, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-205ENST00000394239 VWA3BQ502W6 1294 aa13.56□□□□□ -0.24
TUBD1-205ENST00000394239 HERC4Q5GLZ8 1057 aaPredicted RBP13.56□□□□□ -0.24
TUBD1-205ENST00000394239 MIIPQ5JXC2 388 aa13.56□□□□□ -0.24
TUBD1-205ENST00000394239 NECAB2Q7Z6G3 386 aa13.56□□□□□ -0.24
TUBD1-205ENST00000394239 TRIM50Q86XT4 487 aa13.56□□□□□ -0.24
TUBD1-205ENST00000394239 KAT2BQ92831 832 aa13.56□□□□□ -0.24
TUBD1-205ENST00000394239 ERGIC2Q96RQ1 377 aa13.56□□□□□ -0.24
TUBD1-205ENST00000394239 WDR24Q96S15 920 aa13.56□□□□□ -0.24
TUBD1-205ENST00000394239 TSEN34Q9BSV6 310 aaKnown RBP13.56□□□□□ -0.24
TUBD1-205ENST00000394239 ZNHIT6Q9NWK9 470 aaKnown RBP13.56□□□□□ -0.24
TUBD1-205ENST00000394239 VAV3Q9UKW4 847 aa13.56□□□□□ -0.24
TUBD1-205ENST00000394239 NFASCO94856 1347 aa13.55□□□□□ -0.24
TUBD1-205ENST00000394239 LAMA2P24043 3122 aaKnown RBP13.55□□□□□ -0.24
TUBD1-205ENST00000394239 NPHP3-ACAD11A0A0J9YXS1 232 aa13.55□□□□□ -0.24
TUBD1-205ENST00000394239 RBAK-RBAKDNI3L0D1 243 aa13.55□□□□□ -0.24
TUBD1-205ENST00000394239 FANCGO15287 622 aa13.55□□□□□ -0.24
TUBD1-205ENST00000394239 HOXD8P13378 290 aaPredicted RBP13.55□□□□□ -0.24
TUBD1-205ENST00000394239 RGS19P49795 217 aa13.55□□□□□ -0.24
TUBD1-205ENST00000394239 NAA30Q147X3 362 aaPredicted RBP13.55□□□□□ -0.24
TUBD1-205ENST00000394239 MAN2A1Q16706 1144 aa13.55□□□□□ -0.24
TUBD1-205ENST00000394239 LRRC26Q2I0M4 334 aa13.55□□□□□ -0.24
TUBD1-205ENST00000394239 ARHGAP29Q52LW3 1261 aa13.55□□□□□ -0.24
TUBD1-205ENST00000394239 GLIS3Q8NEA6 775 aa13.55□□□□□ -0.24
TUBD1-205ENST00000394239 ACRBPQ8NEB7 543 aa13.55□□□□□ -0.24
TUBD1-205ENST00000394239 ZNF397Q8NF99 534 aaPredicted RBP13.55□□□□□ -0.24
TUBD1-205ENST00000394239 SLC5A5Q92911 643 aa13.55□□□□□ -0.24
TUBD1-205ENST00000394239 JPH1Q9HDC5 661 aaPredicted RBP13.55□□□□□ -0.24
TUBD1-205ENST00000394239 CGNQ9P2M7 1197 aaKnown RBP13.55□□□□□ -0.24
TUBD1-205ENST00000394239 ALPK3Q96L96 1907 aa13.54□□□□□ -0.24
TUBD1-205ENST00000394239 FRMD3A2A2Y4 597 aa13.54□□□□□ -0.24
TUBD1-205ENST00000394239 MOXD2PA6NHM9 499 aa13.54□□□□□ -0.24
TUBD1-205ENST00000394239 SPATA31C1P0DKV0 1188 aa13.54□□□□□ -0.24
TUBD1-205ENST00000394239 ZBED6P86452 979 aa13.54□□□□□ -0.24
TUBD1-205ENST00000394239 FKBP3Q00688 224 aaKnown RBP13.54□□□□□ -0.24
TUBD1-205ENST00000394239 CACNB1Q02641 598 aaPredicted RBP13.54□□□□□ -0.24
TUBD1-205ENST00000394239 FIGNQ5HY92 759 aa13.54□□□□□ -0.24
TUBD1-205ENST00000394239 LRRC55Q6ZSA7 311 aa13.54□□□□□ -0.24
TUBD1-205ENST00000394239 KCTD17Q8N5Z5 321 aa13.54□□□□□ -0.24
TUBD1-205ENST00000394239 SYT2Q8N9I0 419 aaPredicted RBP13.54□□□□□ -0.24
TUBD1-205ENST00000394239 PCSK9Q8NBP7 692 aaKnown RBP13.54□□□□□ -0.24
TUBD1-205ENST00000394239 MNS1Q8NEH6 495 aa13.54□□□□□ -0.24
TUBD1-205ENST00000394239 PCYT2Q99447 389 aa13.54□□□□□ -0.24
TUBD1-205ENST00000394239 C16orf70Q9BSU1 422 aa13.54□□□□□ -0.24
TUBD1-205ENST00000394239 POLR3CQ9BUI4 534 aaPredicted RBP13.54□□□□□ -0.24
TUBD1-205ENST00000394239 TTYH3Q9C0H2 523 aa13.54□□□□□ -0.24
TUBD1-205ENST00000394239 NDST4Q9H3R1 872 aa13.54□□□□□ -0.24
TUBD1-205ENST00000394239 ZHX3Q9H4I2 956 aa13.54□□□□□ -0.24
TUBD1-205ENST00000394239 TBC1D7Q9P0N9 293 aa13.54□□□□□ -0.24
TUBD1-205ENST00000394239 SLC9A2Q9UBY0 812 aa13.54□□□□□ -0.24
TUBD1-205ENST00000394239 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.54□□□□□ -0.24
TUBD1-205ENST00000394239 V9GYY5 206 aaPredicted RBP13.54□□□□□ -0.24
TUBD1-205ENST00000394239 RANBP2P49792 3224 aaKnown RBP13.54□□□□□ -0.24
TUBD1-205ENST00000394239 A0A1W2PQJ5 194 aa13.53□□□□□ -0.24
TUBD1-205ENST00000394239 NOP56O00567 594 aaKnown RBP13.53□□□□□ -0.24
TUBD1-205ENST00000394239 PSMD10O75832 226 aa13.53□□□□□ -0.24
TUBD1-205ENST00000394239 NDUFA10O95299 355 aa13.53□□□□□ -0.24
TUBD1-205ENST00000394239 TCF7P36402 384 aaPredicted RBP13.53□□□□□ -0.24
TUBD1-205ENST00000394239 KLK7P49862 253 aa13.53□□□□□ -0.24
TUBD1-205ENST00000394239 ACTR2P61160 394 aa13.53□□□□□ -0.24
TUBD1-205ENST00000394239 RAD51AP2Q09MP3 1159 aa13.53□□□□□ -0.24
TUBD1-205ENST00000394239 DGKDQ16760 1214 aa13.53□□□□□ -0.24
TUBD1-205ENST00000394239 ZCWPW2Q504Y3 356 aa13.53□□□□□ -0.24
TUBD1-205ENST00000394239 ARSHQ5FYA8 562 aa13.53□□□□□ -0.24
TUBD1-205ENST00000394239 B3GNT9Q6UX72 402 aa13.53□□□□□ -0.24
TUBD1-205ENST00000394239 SLC39A5Q6ZMH5 540 aa13.53□□□□□ -0.24
TUBD1-205ENST00000394239 CHP1Q99653 195 aa13.53□□□□□ -0.24
TUBD1-205ENST00000394239 EIF2AK1Q9BQI3 630 aaKnown RBP13.53□□□□□ -0.24
TUBD1-205ENST00000394239 UNC45AQ9H3U1 944 aa13.53□□□□□ -0.24
TUBD1-205ENST00000394239 PCDHA2Q9Y5H9 948 aa13.53□□□□□ -0.24
TUBD1-205ENST00000394239 EPN1Q9Y6I3 576 aaPredicted RBP13.53□□□□□ -0.24
TUBD1-205ENST00000394239 PPFIA4O75335 1185 aa13.53□□□□□ -0.24
TUBD1-205ENST00000394239 GNA14O95837 355 aa13.53□□□□□ -0.24
TUBD1-205ENST00000394239 LGALS2P05162 132 aa13.53□□□□□ -0.24
TUBD1-205ENST00000394239 CHMP4BP1P59074 171 aa13.53□□□□□ -0.24
TUBD1-205ENST00000394239 CYP4A11Q02928 519 aa13.53□□□□□ -0.24
TUBD1-205ENST00000394239 ELF2Q15723 593 aa13.53□□□□□ -0.24
TUBD1-205ENST00000394239 MEA1Q16626 185 aa13.53□□□□□ -0.24
TUBD1-205ENST00000394239 UTP14CQ5TAP6 766 aaKnown RBP13.53□□□□□ -0.24
TUBD1-205ENST00000394239 LRCH2Q5VUJ6 765 aa13.53□□□□□ -0.24
TUBD1-205ENST00000394239 NELFCDQ8IXH7 590 aa13.53□□□□□ -0.24
TUBD1-205ENST00000394239 GLT1D1Q96MS3 346 aa13.53□□□□□ -0.24
TUBD1-205ENST00000394239 CEP63Q96MT8 703 aa13.53□□□□□ -0.24
TUBD1-205ENST00000394239 STARD7Q9NQZ5 370 aa13.53□□□□□ -0.24
TUBD1-205ENST00000394239 COL4A3BPQ9Y5P4 624 aa13.53□□□□□ -0.24
TUBD1-205ENST00000394239 SCN10AQ9Y5Y9 1956 aa13.52□□□□□ -0.24
TUBD1-205ENST00000394239 EML1O00423 815 aa13.52□□□□□ -0.25
TUBD1-205ENST00000394239 CHMP2AO43633 222 aa13.52□□□□□ -0.25
TUBD1-205ENST00000394239 GAS7O60861 476 aa13.52□□□□□ -0.25
TUBD1-205ENST00000394239 ATG7O95352 703 aa13.52□□□□□ -0.25
TUBD1-205ENST00000394239 F2P00734 622 aa13.52□□□□□ -0.25
TUBD1-205ENST00000394239 CYLC1P35663 651 aaPredicted RBP13.52□□□□□ -0.25
TUBD1-205ENST00000394239 GIT2Q14161 759 aa13.52□□□□□ -0.25
TUBD1-205ENST00000394239 HIC1Q14526 733 aa13.52□□□□□ -0.25
TUBD1-205ENST00000394239 TRIM60Q495X7 471 aa13.52□□□□□ -0.25
TUBD1-205ENST00000394239 CCDC40Q4G0X9 1142 aa13.52□□□□□ -0.25
TUBD1-205ENST00000394239 ABHD15Q6UXT9 468 aa13.52□□□□□ -0.25
TUBD1-205ENST00000394239 PPP4R3CPQ6ZMV5 832 aa13.52□□□□□ -0.25
TUBD1-205ENST00000394239 SCFD1Q8WVM8 642 aa13.52□□□□□ -0.25
TUBD1-205ENST00000394239 SEPT1Q8WYJ6 367 aa13.52□□□□□ -0.25
TUBD1-205ENST00000394239 VTI1AQ96AJ9 217 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms