RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 ANKRD44Q8N8A2 993 aa8.83□□□□□ -1
LIMS1-203ENST00000393310 ACDQ96AP0 544 aa8.83□□□□□ -1
LIMS1-203ENST00000393310 DDX27Q96GQ7 796 aaKnown RBP8.83□□□□□ -1
LIMS1-203ENST00000393310 ZNF302Q9NR11 478 aa8.83□□□□□ -1
LIMS1-203ENST00000393310 SYNRGQ9UMZ2 1314 aa8.83□□□□□ -1
LIMS1-203ENST00000393310 HIP1RO75146 1068 aa8.83□□□□□ -1
LIMS1-203ENST00000393310 OATP04181 439 aa8.83□□□□□ -1
LIMS1-203ENST00000393310 ANXA13P27216 316 aa8.83□□□□□ -1
LIMS1-203ENST00000393310 TPD52P55327 224 aaPredicted RBP8.83□□□□□ -1
LIMS1-203ENST00000393310 SSRP1Q08945 709 aaKnown RBP8.83□□□□□ -1
LIMS1-203ENST00000393310 SIGLEC14Q08ET2 396 aa8.83□□□□□ -1
LIMS1-203ENST00000393310 AP3B2Q13367 1082 aa8.83□□□□□ -1
LIMS1-203ENST00000393310 KRT72Q14CN4 511 aa8.83□□□□□ -1
LIMS1-203ENST00000393310 METTL7BQ6UX53 244 aa8.83□□□□□ -1
LIMS1-203ENST00000393310 SESTD1Q86VW0 696 aa8.83□□□□□ -1
LIMS1-203ENST00000393310 GSDMBQ8TAX9 411 aa8.83□□□□□ -1
LIMS1-203ENST00000393310 PSPC1Q8WXF1 523 aaKnown RBP8.83□□□□□ -1
LIMS1-203ENST00000393310 SCLYQ96I15 445 aa8.83□□□□□ -1
LIMS1-203ENST00000393310 LUC7LQ9NQ29 371 aaKnown RBP8.83□□□□□ -1
LIMS1-203ENST00000393310 FRMPD2Q68DX3 1309 aaPredicted RBP8.83□□□□□ -1
LIMS1-203ENST00000393310 TBC1D4O60343 1298 aa8.83□□□□□ -1
LIMS1-203ENST00000393310 FGFR2P21802 821 aa8.83□□□□□ -1
LIMS1-203ENST00000393310 KARSQ15046 597 aaKnown RBP8.83□□□□□ -1
LIMS1-203ENST00000393310 PLPP4Q5VZY2 271 aa8.83□□□□□ -1
LIMS1-203ENST00000393310 MMS22LQ6ZRQ5 1243 aa8.83□□□□□ -1
LIMS1-203ENST00000393310 DYNLL2Q96FJ2 89 aa8.83□□□□□ -1
LIMS1-203ENST00000393310 MAK16Q9BXY0 300 aaKnown RBP8.83□□□□□ -1
LIMS1-203ENST00000393310 MTMR1Q13613 665 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 HAUS3Q68CZ6 603 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 FAAH2Q6GMR7 532 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 LEMD2Q8NC56 503 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 NOC4LQ9BVI4 516 aaKnown RBP8.82□□□□□ -1
LIMS1-203ENST00000393310 SEPT3Q9UH03 358 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 ITGB1BP2Q9UKP3 347 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 TMCC3Q9ULS5 477 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 RBM47A0AV96 593 aaKnown RBP8.82□□□□□ -1
LIMS1-203ENST00000393310 POLR2FP61218 127 aaKnown RBP8.82□□□□□ -1
LIMS1-203ENST00000393310 TOMM20Q15388 145 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 MAP9Q49MG5 647 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 PPFIBP2Q8ND30 876 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 GOLGA1Q92805 767 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 SLC9A2Q9UBY0 812 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 PRELID1Q9Y255 219 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 MRPS23Q9Y3D9 190 aaKnown RBP8.82□□□□□ -1
LIMS1-203ENST00000393310 SQORQ9Y6N5 450 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 PNMA6FA0A0J9YX94 578 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 TRIM66O15016 1216 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 ZBTB43O43298 467 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 PLA2G6O60733 806 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 GNSP15586 552 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 ATP2B1P20020 1258 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 LMAN1P49257 510 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 MAP3K7CLP57077 242 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 STK3Q13188 491 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 RBM23Q86U06 439 aaKnown RBP8.82□□□□□ -1
LIMS1-203ENST00000393310 SSH3Q8TE77 659 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 IMPG2Q9BZV3 1241 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 TRPV6Q9H1D0 765 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 POTEB3A0JP26 581 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 ARHGEF35A5YM69 484 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 WDR64B1ANS9 1081 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 H3BQ06 376 aaPredicted RBP8.82□□□□□ -1
LIMS1-203ENST00000393310 INO80B-WBP1J3KQ70 363 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 MARK3P27448 753 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 FAPQ12884 760 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 MTX1Q13505 466 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 RARS2Q5T160 578 aaKnown RBP8.82□□□□□ -1
LIMS1-203ENST00000393310 BROXQ5VW32 411 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 BLOC1S2Q6QNY1 142 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 POTEBQ6S5H4 581 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 NANOGNBQ7Z5D8 188 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 CEP57Q86XR8 500 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 GPIHBP1Q8IV16 184 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 NPLOC4Q8TAT6 608 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 PBX4Q9BYU1 374 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 TRIM7Q9C029 511 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 SFXN1Q9H9B4 322 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 SLC38A10Q9HBR0 1119 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 PRM3Q9NNZ6 103 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 JADE2Q9NQC1 790 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 EXOC7Q9UPT5 735 aa8.82□□□□□ -1
LIMS1-203ENST00000393310 PCNTO95613 3336 aa8.81□□□□□ -1
LIMS1-203ENST00000393310 UBR3Q6ZT12 1888 aa8.81□□□□□ -1
LIMS1-203ENST00000393310 KLHL33A6NCF5 533 aa8.81□□□□□ -1
LIMS1-203ENST00000393310 POLR3GO15318 223 aaPredicted RBP8.81□□□□□ -1
LIMS1-203ENST00000393310 SNUPNO95149 360 aaKnown RBP8.81□□□□□ -1
LIMS1-203ENST00000393310 IFNAR2P48551 515 aa8.81□□□□□ -1
LIMS1-203ENST00000393310 NRIP1P48552 1158 aa8.81□□□□□ -1
LIMS1-203ENST00000393310 HAND2P61296 217 aa8.81□□□□□ -1
LIMS1-203ENST00000393310 MRPS6P82932 125 aaKnown RBP8.81□□□□□ -1
LIMS1-203ENST00000393310 RCN1Q15293 331 aa8.81□□□□□ -1
LIMS1-203ENST00000393310 TMCO3Q6UWJ1 677 aa8.81□□□□□ -1
LIMS1-203ENST00000393310 PPP1R21Q6ZMI0 780 aa8.81□□□□□ -1
LIMS1-203ENST00000393310 DAAM2Q86T65 1068 aa8.81□□□□□ -1
LIMS1-203ENST00000393310 GANCQ8TET4 914 aa8.81□□□□□ -1
LIMS1-203ENST00000393310 LEO1Q8WVC0 666 aaPredicted RBP8.81□□□□□ -1
LIMS1-203ENST00000393310 N4BP2L2Q92802 583 aaPredicted RBP8.81□□□□□ -1
LIMS1-203ENST00000393310 TUBA8Q9NY65 449 aaPredicted RBP8.81□□□□□ -1
LIMS1-203ENST00000393310 PKD1L3Q7Z443 1732 aa8.81□□□□□ -1
LIMS1-203ENST00000393310 SLX4Q8IY92 1834 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms