RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 HNRNPCL1O60812 293 aaKnown RBP8.16□□□□□ -1.1
VTI1A-201ENST00000393077 TAF5LO75529 589 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 ASLP04424 464 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 LYNP07948 512 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 MX2P20592 715 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 TUBP50607 506 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 HPCAP84074 193 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 THOC5Q13769 683 aaKnown RBP8.16□□□□□ -1.1
VTI1A-201ENST00000393077 PDCD4Q53EL6 469 aaKnown RBP8.16□□□□□ -1.1
VTI1A-201ENST00000393077 CREG2Q8IUH2 290 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 DIS3L2Q8IYB7 885 aaKnown RBP8.16□□□□□ -1.1
VTI1A-201ENST00000393077 TUBGCP2Q9BSJ2 902 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 CENPOQ9BU64 300 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 CCDC28BQ9BUN5 200 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 GJB4Q9NTQ9 266 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 FADS3Q9Y5Q0 445 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 MYO5BQ9ULV0 1848 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 GPR75-ASB3A0A0A6YYF3 556 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 PALMO75781 387 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 UNC5CO95185 931 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 RARAP10276 462 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 PRLRP16471 622 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 ADD1P35611 737 aaKnown RBP8.16□□□□□ -1.1
VTI1A-201ENST00000393077 PGM1P36871 562 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 HALP42357 657 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 STAT2P52630 851 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 ATP1A4Q13733 1029 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 DPY19L2Q6NUT2 758 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 MREGQ8N565 214 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 CENPTQ96BT3 561 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 DGCR14Q96DF8 476 aaKnown RBP8.16□□□□□ -1.1
VTI1A-201ENST00000393077 CABP5Q9NP86 173 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 SEC63Q9UGP8 760 aaKnown RBP8.16□□□□□ -1.1
VTI1A-201ENST00000393077 TBK1Q9UHD2 729 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 AGAP1Q9UPQ3 857 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 ASB3Q9Y575 518 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 SH3TC1Q8TE82 1336 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 RIMS1Q86UR5 1692 aaKnown RBP8.16□□□□□ -1.1
VTI1A-201ENST00000393077 TBC1D12O60347 775 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 CYP21A2P08686 494 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 TPBGLP0DKB5 382 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 ZNF18P17022 549 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 EEF1GP26641 437 aaKnown RBP8.16□□□□□ -1.1
VTI1A-201ENST00000393077 TRIM16LQ309B1 348 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 LRRC24Q50LG9 513 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 SUN5Q8TC36 379 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 ASAP3Q8TDY4 903 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 U2AF1L4Q8WU68 220 aaKnown RBP8.16□□□□□ -1.1
VTI1A-201ENST00000393077 MRRFQ96E11 262 aaKnown RBP8.16□□□□□ -1.1
VTI1A-201ENST00000393077 PBKQ96KB5 322 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 CCDC138Q96M89 665 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 AGBL1Q96MI9 1066 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 TRPC7Q9HCX4 862 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 JAG2Q9Y219 1238 aa8.16□□□□□ -1.1
VTI1A-201ENST00000393077 SARSP49591 514 aaKnown RBP8.15□□□□□ -1.1
VTI1A-201ENST00000393077 CCSAPQ6IQ19 270 aaPredicted RBP8.15□□□□□ -1.1
VTI1A-201ENST00000393077 NLRP9Q7RTR0 991 aa8.15□□□□□ -1.1
VTI1A-201ENST00000393077 C1orf131Q8NDD1 294 aaKnown RBP8.15□□□□□ -1.1
VTI1A-201ENST00000393077 PHKBQ93100 1093 aa8.15□□□□□ -1.1
VTI1A-201ENST00000393077 PAIP1Q9H074 479 aaKnown RBP8.15□□□□□ -1.1
VTI1A-201ENST00000393077 ALDH8A1Q9H2A2 487 aaPredicted RBP8.15□□□□□ -1.1
VTI1A-201ENST00000393077 TIMMDC1Q9NPL8 285 aa8.15□□□□□ -1.1
VTI1A-201ENST00000393077 USP40Q9NVE5 1235 aa8.15□□□□□ -1.1
VTI1A-201ENST00000393077 USP21Q9UK80 565 aa8.15□□□□□ -1.1
VTI1A-201ENST00000393077 A6NJR5 290 aa8.15□□□□□ -1.1
VTI1A-201ENST00000393077 BIRC5O15392 142 aa8.15□□□□□ -1.1
VTI1A-201ENST00000393077 XPOTO43592 962 aaKnown RBP8.15□□□□□ -1.1
VTI1A-201ENST00000393077 IGKV5-2P06315 115 aa8.15□□□□□ -1.1
VTI1A-201ENST00000393077 MSL3P1P0C860 447 aa8.15□□□□□ -1.1
VTI1A-201ENST00000393077 RTP1P59025 263 aa8.15□□□□□ -1.1
VTI1A-201ENST00000393077 NDUFA5Q16718 116 aa8.15□□□□□ -1.1
VTI1A-201ENST00000393077 TMC5Q6UXY8 1006 aa8.15□□□□□ -1.1
VTI1A-201ENST00000393077 CCDC105Q8IYK2 499 aa8.15□□□□□ -1.1
VTI1A-201ENST00000393077 HIPK4Q8NE63 616 aa8.15□□□□□ -1.1
VTI1A-201ENST00000393077 TTC8Q8TAM2 541 aa8.15□□□□□ -1.1
VTI1A-201ENST00000393077 VPS50Q96JG6 964 aa8.15□□□□□ -1.1
VTI1A-201ENST00000393077 SLC39A3Q9BRY0 314 aa8.15□□□□□ -1.1
VTI1A-201ENST00000393077 CDCA7Q9BWT1 371 aaPredicted RBP8.15□□□□□ -1.1
VTI1A-201ENST00000393077 GIMAP4Q9NUV9 329 aa8.15□□□□□ -1.1
VTI1A-201ENST00000393077 C6orf203Q9P0P8 240 aaPredicted RBP8.15□□□□□ -1.1
VTI1A-201ENST00000393077 AMACRQ9UHK6 382 aa8.15□□□□□ -1.1
VTI1A-201ENST00000393077 SYNPO2Q9UMS6 1093 aa8.15□□□□□ -1.1
VTI1A-201ENST00000393077 RTCBQ9Y3I0 505 aaKnown RBP8.15□□□□□ -1.1
VTI1A-201ENST00000393077 RSPH10B2B2RC85 870 aa8.15□□□□□ -1.11
VTI1A-201ENST00000393077 MAN1A2O60476 641 aa8.15□□□□□ -1.11
VTI1A-201ENST00000393077 PGM3O95394 542 aa8.15□□□□□ -1.11
VTI1A-201ENST00000393077 GNA14O95837 355 aa8.15□□□□□ -1.11
VTI1A-201ENST00000393077 RSPH10BP0C881 870 aa8.15□□□□□ -1.11
VTI1A-201ENST00000393077 CDC27P30260 824 aa8.15□□□□□ -1.11
VTI1A-201ENST00000393077 CDK7P50613 346 aa8.15□□□□□ -1.11
VTI1A-201ENST00000393077 HERVK_113P62684 666 aa8.15□□□□□ -1.11
VTI1A-201ENST00000393077 TUBA4AP68366 448 aa8.15□□□□□ -1.11
VTI1A-201ENST00000393077 GRIN1Q05586 938 aa8.15□□□□□ -1.11
VTI1A-201ENST00000393077 KLHL30Q0D2K2 578 aa8.15□□□□□ -1.11
VTI1A-201ENST00000393077 ITGA9Q13797 1035 aa8.15□□□□□ -1.11
VTI1A-201ENST00000393077 CLEC4GQ6UXB4 293 aa8.15□□□□□ -1.11
VTI1A-201ENST00000393077 RGS9BPQ6ZS82 235 aa8.15□□□□□ -1.11
VTI1A-201ENST00000393077 ZNF589Q86UQ0 364 aaPredicted RBP8.15□□□□□ -1.11
VTI1A-201ENST00000393077 RPGRQ92834 1020 aaKnown RBP8.15□□□□□ -1.11
VTI1A-201ENST00000393077 HAUS8Q9BT25 410 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms