RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 KCNA1Q09470 495 aa15.66■□□□□ 0.1
CCDC50-201ENST00000392455 SOX13Q9UN79 622 aa15.66■□□□□ 0.1
CCDC50-201ENST00000392455 KIAA1024Q9UPX6 916 aa15.66■□□□□ 0.1
CCDC50-201ENST00000392455 MYH11P35749 1972 aa15.66■□□□□ 0.1
CCDC50-201ENST00000392455 KRT1P04264 644 aa15.66■□□□□ 0.1
CCDC50-201ENST00000392455 DR1Q01658 176 aa15.66■□□□□ 0.1
CCDC50-201ENST00000392455 CHRNDQ07001 517 aa15.66■□□□□ 0.1
CCDC50-201ENST00000392455 KRT77Q7Z794 578 aa15.66■□□□□ 0.1
CCDC50-201ENST00000392455 THEM5Q8N1Q8 247 aa15.66■□□□□ 0.1
CCDC50-201ENST00000392455 TINF2Q9BSI4 451 aa15.66■□□□□ 0.1
CCDC50-201ENST00000392455 COBLO75128 1261 aa15.66■□□□□ 0.1
CCDC50-201ENST00000392455 PTGDRQ13258 359 aa15.66■□□□□ 0.1
CCDC50-201ENST00000392455 INAQ16352 499 aa15.66■□□□□ 0.1
CCDC50-201ENST00000392455 TBC1D10BQ4KMP7 808 aaPredicted RBP15.66■□□□□ 0.1
CCDC50-201ENST00000392455 EPM2AIP1Q7L775 607 aaPredicted RBP15.66■□□□□ 0.1
CCDC50-201ENST00000392455 GANCQ8TET4 914 aa15.66■□□□□ 0.1
CCDC50-201ENST00000392455 Q3C1V9 767 aa15.66■□□□□ 0.1
CCDC50-201ENST00000392455 ITPRIPL1Q6GPH6 555 aa15.66■□□□□ 0.1
CCDC50-201ENST00000392455 AP5M1Q9H0R1 490 aa15.66■□□□□ 0.1
CCDC50-201ENST00000392455 GPATCH4Q5T3I0 446 aaKnown RBP15.66■□□□□ 0.1
CCDC50-201ENST00000392455 FAM45BPQ6NSW5 357 aa15.66■□□□□ 0.1
CCDC50-201ENST00000392455 SPICE1Q8N0Z3 855 aa15.66■□□□□ 0.1
CCDC50-201ENST00000392455 ACCSQ96QU6 501 aa15.66■□□□□ 0.1
CCDC50-201ENST00000392455 PRRG3Q9BZD7 231 aa15.66■□□□□ 0.1
CCDC50-201ENST00000392455 SCN3BQ9NY72 215 aa15.66■□□□□ 0.1
CCDC50-201ENST00000392455 EHD2Q9NZN4 543 aa15.66■□□□□ 0.1
CCDC50-201ENST00000392455 AFPP02771 609 aaKnown RBP15.66■□□□□ 0.1
CCDC50-201ENST00000392455 ZNF827Q17R98 1081 aa15.66■□□□□ 0.1
CCDC50-201ENST00000392455 IFT43Q96FT9 208 aa15.66■□□□□ 0.1
CCDC50-201ENST00000392455 AGBL1Q96MI9 1066 aa15.66■□□□□ 0.1
CCDC50-201ENST00000392455 WDR11Q9BZH6 1224 aa15.66■□□□□ 0.1
CCDC50-201ENST00000392455 TBX22Q9Y458 520 aa15.66■□□□□ 0.1
CCDC50-201ENST00000392455 JAK1P23458 1154 aa15.66■□□□□ 0.1
CCDC50-201ENST00000392455 MXD4Q14582 209 aaPredicted RBP15.66■□□□□ 0.1
CCDC50-201ENST00000392455 SLFN13Q68D06 897 aa15.66■□□□□ 0.1
CCDC50-201ENST00000392455 STON1Q9Y6Q2 735 aa15.66■□□□□ 0.1
CCDC50-201ENST00000392455 PPARGC1AQ9UBK2 798 aaKnown RBP15.65■□□□□ 0.1
CCDC50-201ENST00000392455 MAGED2Q9UNF1 606 aaPredicted RBP15.65■□□□□ 0.1
CCDC50-201ENST00000392455 MLH3Q9UHC1 1453 aa15.65■□□□□ 0.1
CCDC50-201ENST00000392455 VCAM1P19320 739 aa15.65■□□□□ 0.1
CCDC50-201ENST00000392455 BRD2P25440 801 aaKnown RBP15.65■□□□□ 0.1
CCDC50-201ENST00000392455 NDUFA8P51970 172 aa15.65■□□□□ 0.1
CCDC50-201ENST00000392455 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.65■□□□□ 0.1
CCDC50-201ENST00000392455 GJA10Q969M2 543 aa15.65■□□□□ 0.1
CCDC50-201ENST00000392455 PDCD10Q9BUL8 212 aa15.65■□□□□ 0.1
CCDC50-201ENST00000392455 CLIC4Q9Y696 253 aa15.65■□□□□ 0.1
CCDC50-201ENST00000392455 ATP10DQ9P241 1426 aa15.65■□□□□ 0.1
CCDC50-201ENST00000392455 KRT14P02533 472 aa15.65■□□□□ 0.1
CCDC50-201ENST00000392455 KRT76Q01546 638 aa15.65■□□□□ 0.1
CCDC50-201ENST00000392455 NAA35Q5VZE5 725 aa15.65■□□□□ 0.1
CCDC50-201ENST00000392455 HIBCHQ6NVY1 386 aaPredicted RBP15.65■□□□□ 0.1
CCDC50-201ENST00000392455 MFN1Q8IWA4 741 aa15.65■□□□□ 0.1
CCDC50-201ENST00000392455 MIF4GDA9UHW6 222 aaKnown RBP15.65■□□□□ 0.1
CCDC50-201ENST00000392455 ADD1P35611 737 aaKnown RBP15.65■□□□□ 0.1
CCDC50-201ENST00000392455 MESDQ14696 234 aa15.65■□□□□ 0.1
CCDC50-201ENST00000392455 KCTD1Q719H9 257 aa15.65■□□□□ 0.1
CCDC50-201ENST00000392455 ZNF577Q9BSK1 485 aa15.65■□□□□ 0.1
CCDC50-201ENST00000392455 HACD3Q9P035 362 aa15.65■□□□□ 0.1
CCDC50-201ENST00000392455 TRAF3IP3Q9Y228 551 aa15.65■□□□□ 0.1
CCDC50-201ENST00000392455 BLMP54132 1417 aaPredicted RBP15.65■□□□□ 0.1
CCDC50-201ENST00000392455 STXBP3O00186 592 aa15.65■□□□□ 0.1
CCDC50-201ENST00000392455 FKBP3Q00688 224 aaKnown RBP15.65■□□□□ 0.1
CCDC50-201ENST00000392455 NAALADL2Q58DX5 795 aa15.65■□□□□ 0.1
CCDC50-201ENST00000392455 M0R2C6 588 aa15.65■□□□□ 0.1
CCDC50-201ENST00000392455 PPEF1O14829 653 aaPredicted RBP15.65■□□□□ 0.1
CCDC50-201ENST00000392455 TRIM13O60858 407 aa15.65■□□□□ 0.1
CCDC50-201ENST00000392455 S100A9P06702 114 aaKnown RBP15.65■□□□□ 0.1
CCDC50-201ENST00000392455 GUCA1AP43080 201 aaPredicted RBP15.65■□□□□ 0.1
CCDC50-201ENST00000392455 E2F5Q15329 346 aa15.65■□□□□ 0.1
CCDC50-201ENST00000392455 VIPAS39Q9H9C1 493 aa15.65■□□□□ 0.1
CCDC50-201ENST00000392455 EPB41L5Q9HCM4 733 aa15.65■□□□□ 0.1
CCDC50-201ENST00000392455 UTP6Q9NYH9 597 aaKnown RBP15.65■□□□□ 0.1
CCDC50-201ENST00000392455 PCDHA1Q9Y5I3 950 aa15.65■□□□□ 0.1
CCDC50-201ENST00000392455 SERPING1P05155 500 aa15.65■□□□□ 0.1
CCDC50-201ENST00000392455 MAML3Q96JK9 1138 aa15.65■□□□□ 0.1
CCDC50-201ENST00000392455 UBXN2AP68543 259 aa15.64■□□□□ 0.09
CCDC50-201ENST00000392455 RAD51Q06609 339 aa15.64■□□□□ 0.09
CCDC50-201ENST00000392455 ASCC2Q9H1I8 757 aaPredicted RBP15.64■□□□□ 0.09
CCDC50-201ENST00000392455 ADA2Q9NZK5 511 aa15.64■□□□□ 0.09
CCDC50-201ENST00000392455 CALB1P05937 261 aa15.64■□□□□ 0.09
CCDC50-201ENST00000392455 CATSPER3Q86XQ3 398 aa15.64■□□□□ 0.09
CCDC50-201ENST00000392455 GIMAP8Q8ND71 665 aaPredicted RBP15.64■□□□□ 0.09
CCDC50-201ENST00000392455 PI4K2BQ8TCG2 481 aa15.64■□□□□ 0.09
CCDC50-201ENST00000392455 RAPGEF5Q92565 580 aa15.64■□□□□ 0.09
CCDC50-201ENST00000392455 BICRAQ9NZM4 1560 aa15.64■□□□□ 0.09
CCDC50-201ENST00000392455 CAPRIN2Q6IMN6 1127 aaKnown RBP15.64■□□□□ 0.09
CCDC50-201ENST00000392455 NUP85Q9BW27 656 aa15.64■□□□□ 0.09
CCDC50-201ENST00000392455 TUBGCP4Q9UGJ1 667 aa15.64■□□□□ 0.09
CCDC50-201ENST00000392455 FGAP02671 866 aa15.64■□□□□ 0.09
CCDC50-201ENST00000392455 NLRP11P59045 1033 aaKnown RBP15.64■□□□□ 0.09
CCDC50-201ENST00000392455 FBXO18Q8NFZ0 1043 aa15.64■□□□□ 0.09
CCDC50-201ENST00000392455 CNOT6LQ96LI5 555 aaKnown RBP15.64■□□□□ 0.09
CCDC50-201ENST00000392455 HINFPQ9BQA5 517 aa15.64■□□□□ 0.09
CCDC50-201ENST00000392455 AP4S1Q9Y587 144 aa15.64■□□□□ 0.09
CCDC50-201ENST00000392455 NPM3O75607 178 aaKnown RBP15.64■□□□□ 0.09
CCDC50-201ENST00000392455 HPCAP84074 193 aa15.64■□□□□ 0.09
CCDC50-201ENST00000392455 LRRC24Q50LG9 513 aa15.64■□□□□ 0.09
CCDC50-201ENST00000392455 CYP4F22Q6NT55 531 aa15.64■□□□□ 0.09
CCDC50-201ENST00000392455 PCYOX1LQ8NBM8 494 aa15.64■□□□□ 0.09
CCDC50-201ENST00000392455 TMEM161AQ9NX61 479 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms