RNA–Protein interactions for RNA: ENST00000392351.7

HOMER3-202, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,557 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-202ENST00000392351 MDM2Q00987 491 aaPredicted RBP28.11■■■□□ 2.09
HOMER3-202ENST00000392351 AMPD3Q01432 767 aa28.11■■■□□ 2.09
HOMER3-202ENST00000392351 SNW1Q13573 536 aaKnown RBP28.11■■■□□ 2.09
HOMER3-202ENST00000392351 CAPSQ13938 189 aa28.11■■■□□ 2.09
HOMER3-202ENST00000392351 ZNF410Q86VK4 478 aa28.11■■■□□ 2.09
HOMER3-202ENST00000392351 RNF149Q8NC42 400 aa28.11■■■□□ 2.09
HOMER3-202ENST00000392351 ENGASEQ8NFI3 743 aa28.11■■■□□ 2.09
HOMER3-202ENST00000392351 BSNDQ8WZ55 320 aa28.11■■■□□ 2.09
HOMER3-202ENST00000392351 FDXACB1Q9BRP7 624 aaPredicted RBP28.11■■■□□ 2.09
HOMER3-202ENST00000392351 LRRC27Q9C0I9 530 aa28.11■■■□□ 2.09
HOMER3-202ENST00000392351 SFI1A8K8P3 1242 aa28.1■■■□□ 2.09
HOMER3-202ENST00000392351 H0YGN5 161 aa28.1■■■□□ 2.09
HOMER3-202ENST00000392351 NBNO60934 754 aa28.1■■■□□ 2.09
HOMER3-202ENST00000392351 GHRP10912 638 aa28.1■■■□□ 2.09
HOMER3-202ENST00000392351 TFDP1Q14186 410 aa28.1■■■□□ 2.09
HOMER3-202ENST00000392351 FBXO47Q5MNV8 452 aa28.1■■■□□ 2.09
HOMER3-202ENST00000392351 DEFB128Q7Z7B8 93 aa28.1■■■□□ 2.09
HOMER3-202ENST00000392351 GRAMD1CQ8IYS0 662 aa28.1■■■□□ 2.09
HOMER3-202ENST00000392351 CNNM3Q8NE01 707 aa28.1■■■□□ 2.09
HOMER3-202ENST00000392351 TMEM40Q8WWA1 233 aa28.1■■■□□ 2.09
HOMER3-202ENST00000392351 IFT74Q96LB3 600 aa28.1■■■□□ 2.09
HOMER3-202ENST00000392351 OSBPL7Q9BZF2 842 aa28.1■■■□□ 2.09
HOMER3-202ENST00000392351 TBCAO75347 108 aaKnown RBP28.09■■■□□ 2.09
HOMER3-202ENST00000392351 NR1I2O75469 434 aa28.09■■■□□ 2.09
HOMER3-202ENST00000392351 RFC2P35250 354 aa28.09■■■□□ 2.09
HOMER3-202ENST00000392351 FPGSQ05932 587 aa28.09■■■□□ 2.09
HOMER3-202ENST00000392351 GPNMBQ14956 572 aa28.09■■■□□ 2.09
HOMER3-202ENST00000392351 KRBA2Q6ZNG9 492 aa28.09■■■□□ 2.09
HOMER3-202ENST00000392351 LMBRD1Q9NUN5 540 aa28.09■■■□□ 2.09
HOMER3-202ENST00000392351 LRRIQ4A6NIV6 560 aa28.08■■■□□ 2.09
HOMER3-202ENST00000392351 PPP2R5AQ15172 486 aa28.08■■■□□ 2.09
HOMER3-202ENST00000392351 DNAJC19Q96DA6 116 aa28.08■■■□□ 2.09
HOMER3-202ENST00000392351 PAGE5Q96GU1 130 aa28.08■■■□□ 2.09
HOMER3-202ENST00000392351 GCOM2Q9BZD3 368 aaPredicted RBP28.08■■■□□ 2.09
HOMER3-202ENST00000392351 TRIM9Q9C026 710 aa28.08■■■□□ 2.09
HOMER3-202ENST00000392351 ZHX3Q9H4I2 956 aa28.08■■■□□ 2.09
HOMER3-202ENST00000392351 IFT122Q9HBG6 1241 aa28.08■■■□□ 2.09
HOMER3-202ENST00000392351 FAM13AO94988 1023 aa28.07■■■□□ 2.08
HOMER3-202ENST00000392351 DMP1Q13316 513 aaPredicted RBP28.07■■■□□ 2.08
HOMER3-202ENST00000392351 LPIN1Q14693 890 aa28.07■■■□□ 2.08
HOMER3-202ENST00000392351 CSDE1O75534 798 aaKnown RBP28.07■■■□□ 2.08
HOMER3-202ENST00000392351 DARSP14868 501 aaKnown RBP28.07■■■□□ 2.08
HOMER3-202ENST00000392351 EIF4BP23588 611 aaKnown RBP28.07■■■□□ 2.08
HOMER3-202ENST00000392351 MAGEA10P43363 369 aaPredicted RBP28.07■■■□□ 2.08
HOMER3-202ENST00000392351 NAMPTP43490 491 aa28.07■■■□□ 2.08
HOMER3-202ENST00000392351 PHKA2P46019 1235 aa28.07■■■□□ 2.08
HOMER3-202ENST00000392351 PEX3P56589 373 aa28.07■■■□□ 2.08
HOMER3-202ENST00000392351 PPIGQ13427 754 aaKnown RBP eCLIP28.07■■■□□ 2.088e-7■■■■□ 26.1
HOMER3-202ENST00000392351 TSHZ1Q6ZSZ6 1077 aa28.07■■■□□ 2.08
HOMER3-202ENST00000392351 C17orf75Q9HAS0 396 aa28.07■■■□□ 2.08
HOMER3-202ENST00000392351 PARVGQ9HBI0 331 aa28.07■■■□□ 2.08
HOMER3-202ENST00000392351 SQORQ9Y6N5 450 aa28.07■■■□□ 2.08
HOMER3-202ENST00000392351 PLS3P13797 630 aa28.06■■■□□ 2.08
HOMER3-202ENST00000392351 IDEP14735 1019 aa28.06■■■□□ 2.08
HOMER3-202ENST00000392351 CASP1P29466 404 aa28.06■■■□□ 2.08
HOMER3-202ENST00000392351 ZNF131P52739 623 aa28.06■■■□□ 2.08
HOMER3-202ENST00000392351 C7orf25Q9BPX7 421 aa28.06■■■□□ 2.08
HOMER3-202ENST00000392351 BLZF1Q9H2G9 400 aa28.06■■■□□ 2.08
HOMER3-202ENST00000392351 AGO3Q9H9G7 860 aaKnown RBP28.06■■■□□ 2.08
HOMER3-202ENST00000392351 LARSQ9P2J5 1176 aaKnown RBP28.06■■■□□ 2.08
HOMER3-202ENST00000392351 NOC2LQ9Y3T9 749 aaKnown RBP28.06■■■□□ 2.08
HOMER3-202ENST00000392351 CCDC169A6NNP5 214 aa28.05■■■□□ 2.08
HOMER3-202ENST00000392351 CXCL10P02778 98 aa28.05■■■□□ 2.08
HOMER3-202ENST00000392351 NPTX2P47972 431 aa28.05■■■□□ 2.08
HOMER3-202ENST00000392351 PTENP60484 403 aa28.05■■■□□ 2.08
HOMER3-202ENST00000392351 ASIC1P78348 528 aa28.05■■■□□ 2.08
HOMER3-202ENST00000392351 POU5F1BQ06416 359 aa28.05■■■□□ 2.08
HOMER3-202ENST00000392351 ODR4Q5SWX8 454 aa28.05■■■□□ 2.08
HOMER3-202ENST00000392351 RPUSD2Q8IZ73 545 aaKnown RBP28.05■■■□□ 2.08
HOMER3-202ENST00000392351 MYCT1Q8N699 235 aa28.05■■■□□ 2.08
HOMER3-202ENST00000392351 USP38Q8NB14 1042 aa28.05■■■□□ 2.08
HOMER3-202ENST00000392351 DEPTORQ8TB45 409 aa28.05■■■□□ 2.08
HOMER3-202ENST00000392351 VWCEQ96DN2 955 aa28.05■■■□□ 2.08
HOMER3-202ENST00000392351 KIFC3Q9BVG8 833 aa28.05■■■□□ 2.08
HOMER3-202ENST00000392351 IFIH1Q9BYX4 1025 aaKnown RBP28.05■■■□□ 2.08
HOMER3-202ENST00000392351 IL23AQ9NPF7 189 aa28.05■■■□□ 2.08
HOMER3-202ENST00000392351 KINO60870 393 aaKnown RBP28.04■■■□□ 2.08
HOMER3-202ENST00000392351 RPS6KA5O75582 802 aa28.04■■■□□ 2.08
HOMER3-202ENST00000392351 ACRP10323 421 aa28.04■■■□□ 2.08
HOMER3-202ENST00000392351 CD52P31358 61 aa28.04■■■□□ 2.08
HOMER3-202ENST00000392351 CUL4BQ13620 913 aa28.04■■■□□ 2.08
HOMER3-202ENST00000392351 CCDC34Q96HJ3 373 aa28.04■■■□□ 2.08
HOMER3-202ENST00000392351 INO80BQ9C086 356 aaPredicted RBP28.04■■■□□ 2.08
HOMER3-202ENST00000392351 MINDY3Q9H8M7 445 aa28.04■■■□□ 2.08
HOMER3-202ENST00000392351 DACT1Q9NYF0 836 aa28.04■■■□□ 2.08
HOMER3-202ENST00000392351 ADGRA3Q8IWK6 1321 aa28.04■■■□□ 2.08
HOMER3-202ENST00000392351 PAK2Q13177 524 aa28.03■■■□□ 2.08
HOMER3-202ENST00000392351 CDCA2Q69YH5 1023 aaPredicted RBP28.03■■■□□ 2.08
HOMER3-202ENST00000392351 KANK3Q6NY19 840 aa28.03■■■□□ 2.08
HOMER3-202ENST00000392351 CNNM4Q6P4Q7 775 aa28.03■■■□□ 2.08
HOMER3-202ENST00000392351 SRGAP1Q7Z6B7 1085 aa28.03■■■□□ 2.08
HOMER3-202ENST00000392351 FAM228AQ86W67 206 aa28.03■■■□□ 2.08
HOMER3-202ENST00000392351 NFKBIZQ9BYH8 718 aa28.03■■■□□ 2.08
HOMER3-202ENST00000392351 KMT5AQ9NQR1 393 aa28.03■■■□□ 2.08
HOMER3-202ENST00000392351 PFKMP08237 780 aa28.03■■■□□ 2.08
HOMER3-202ENST00000392351 FGFR4P22455 802 aa28.03■■■□□ 2.08
HOMER3-202ENST00000392351 PLEKHG4Q58EX7 1191 aa28.03■■■□□ 2.08
HOMER3-202ENST00000392351 IFNLR1Q8IU57 520 aaPredicted RBP28.03■■■□□ 2.08
HOMER3-202ENST00000392351 ZBTB8OSQ8IWT0 167 aa28.03■■■□□ 2.08
HOMER3-202ENST00000392351 TIGD1Q96MW7 591 aa28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms