RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 TRIM24O15164 1050 aa2.6□□□□□ -1.99
RNU6-239P-201ENST00000390990 RECQL4O94761 1208 aa2.6□□□□□ -1.99
RNU6-239P-201ENST00000390990 TOX4O94842 621 aa2.6□□□□□ -1.99
RNU6-239P-201ENST00000390990 ONECUT2O95948 504 aa2.6□□□□□ -1.99
RNU6-239P-201ENST00000390990 SRGAP2CP0DJJ0 459 aa2.6□□□□□ -1.99
RNU6-239P-201ENST00000390990 POU3F3P20264 500 aaPredicted RBP2.6□□□□□ -1.99
RNU6-239P-201ENST00000390990 HDLBPQ00341 1268 aaKnown RBP2.6□□□□□ -1.99
RNU6-239P-201ENST00000390990 MAP3K12Q12852 859 aa2.6□□□□□ -1.99
RNU6-239P-201ENST00000390990 IFRD2Q12894 506 aaPredicted RBP2.6□□□□□ -1.99
RNU6-239P-201ENST00000390990 GAGE13Q4V321 117 aa2.6□□□□□ -1.99
RNU6-239P-201ENST00000390990 CLEC14AQ86T13 490 aa2.6□□□□□ -1.99
RNU6-239P-201ENST00000390990 ARHGEF19Q8IW93 802 aa2.6□□□□□ -1.99
RNU6-239P-201ENST00000390990 LCORLQ8N3X6 602 aa2.6□□□□□ -1.99
RNU6-239P-201ENST00000390990 Q8N9P0 234 aaPredicted RBP2.6□□□□□ -1.99
RNU6-239P-201ENST00000390990 LINC00476Q8WZB0 136 aa2.6□□□□□ -1.99
RNU6-239P-201ENST00000390990 SMG7Q92540 1137 aaKnown RBP2.6□□□□□ -1.99
RNU6-239P-201ENST00000390990 NELL1Q92832 810 aa2.6□□□□□ -1.99
RNU6-239P-201ENST00000390990 SGSM3Q96HU1 749 aa2.6□□□□□ -1.99
RNU6-239P-201ENST00000390990 SPATA5L1Q9BVQ7 753 aa2.6□□□□□ -1.99
RNU6-239P-201ENST00000390990 KCNH6Q9H252 994 aa2.6□□□□□ -1.99
RNU6-239P-201ENST00000390990 SFMBT1Q9UHJ3 866 aa2.6□□□□□ -1.99
RNU6-239P-201ENST00000390990 FOXP2O15409 715 aa2.59□□□□□ -1.99
RNU6-239P-201ENST00000390990 RBMXL2O75526 392 aaKnown RBP2.59□□□□□ -1.99
RNU6-239P-201ENST00000390990 C1RP00736 705 aa2.59□□□□□ -1.99
RNU6-239P-201ENST00000390990 VSIG10L2P0DP72 767 aa2.59□□□□□ -1.99
RNU6-239P-201ENST00000390990 GNAT2P19087 354 aa2.59□□□□□ -1.99
RNU6-239P-201ENST00000390990 CXCR5P32302 372 aa2.59□□□□□ -1.99
RNU6-239P-201ENST00000390990 ABCG1P45844 678 aa2.59□□□□□ -1.99
RNU6-239P-201ENST00000390990 ELLP55199 621 aaPredicted RBP2.59□□□□□ -1.99
RNU6-239P-201ENST00000390990 LACTBP83111 547 aaPredicted RBP2.59□□□□□ -1.99
RNU6-239P-201ENST00000390990 CRY1Q16526 586 aa2.59□□□□□ -1.99
RNU6-239P-201ENST00000390990 GPR162Q16538 588 aa2.59□□□□□ -1.99
RNU6-239P-201ENST00000390990 FAM214AQ32MH5 1076 aa2.59□□□□□ -1.99
RNU6-239P-201ENST00000390990 DCAF17Q5H9S7 520 aaPredicted RBP2.59□□□□□ -1.99
RNU6-239P-201ENST00000390990 C1QL2Q7Z5L3 287 aa2.59□□□□□ -1.99
RNU6-239P-201ENST00000390990 MTDHQ86UE4 582 aaKnown RBP2.59□□□□□ -1.99
RNU6-239P-201ENST00000390990 NOSTRINQ8IVI9 506 aa2.59□□□□□ -1.99
RNU6-239P-201ENST00000390990 LILRA3Q8N6C8 439 aaPredicted RBP2.59□□□□□ -1.99
RNU6-239P-201ENST00000390990 PLA2G15Q8NCC3 412 aa2.59□□□□□ -1.99
RNU6-239P-201ENST00000390990 CALML6Q8TD86 181 aa2.59□□□□□ -1.99
RNU6-239P-201ENST00000390990 WASF1Q92558 559 aa2.59□□□□□ -1.99
RNU6-239P-201ENST00000390990 ARL8AQ96BM9 186 aa2.59□□□□□ -1.99
RNU6-239P-201ENST00000390990 FAM193BQ96PV7 902 aaPredicted RBP2.59□□□□□ -1.99
RNU6-239P-201ENST00000390990 SLC46A2Q9BY10 475 aa2.59□□□□□ -1.99
RNU6-239P-201ENST00000390990 SLC29A3Q9BZD2 475 aa2.59□□□□□ -1.99
RNU6-239P-201ENST00000390990 ST7Q9NRC1 585 aa2.59□□□□□ -1.99
RNU6-239P-201ENST00000390990 NCDNQ9UBB6 729 aa2.59□□□□□ -1.99
RNU6-239P-201ENST00000390990 DKK2Q9UBU2 259 aa2.59□□□□□ -1.99
RNU6-239P-201ENST00000390990 EIF2B4Q9UI10 523 aaKnown RBP2.59□□□□□ -1.99
RNU6-239P-201ENST00000390990 INPP5FQ9Y2H2 1132 aa2.59□□□□□ -1.99
RNU6-239P-201ENST00000390990 ASB1Q9Y576 335 aa2.59□□□□□ -1.99
RNU6-239P-201ENST00000390990 CCDC66A2RUB6 948 aa2.58□□□□□ -2
RNU6-239P-201ENST00000390990 ARVCFO00192 962 aa2.58□□□□□ -2
RNU6-239P-201ENST00000390990 NCR1O76036 304 aa2.58□□□□□ -2
RNU6-239P-201ENST00000390990 RASGRP1O95267 797 aa2.58□□□□□ -2
RNU6-239P-201ENST00000390990 NDUFA10O95299 355 aa2.58□□□□□ -2
RNU6-239P-201ENST00000390990 MATN4O95460 622 aa2.58□□□□□ -2
RNU6-239P-201ENST00000390990 IGLV2-14P01704 120 aa2.58□□□□□ -2
RNU6-239P-201ENST00000390990 GYPEP15421 78 aa2.58□□□□□ -2
RNU6-239P-201ENST00000390990 AVPR1BP47901 424 aa2.58□□□□□ -2
RNU6-239P-201ENST00000390990 DNM2P50570 870 aa2.58□□□□□ -2
RNU6-239P-201ENST00000390990 ALDH6A1Q02252 535 aaKnown RBP2.58□□□□□ -2
RNU6-239P-201ENST00000390990 SPIDRQ14159 915 aa2.58□□□□□ -2
RNU6-239P-201ENST00000390990 CATSPEREQ5SY80 951 aa2.58□□□□□ -2
RNU6-239P-201ENST00000390990 KRT40Q6A162 431 aa2.58□□□□□ -2
RNU6-239P-201ENST00000390990 APBB1IPQ7Z5R6 666 aaPredicted RBP2.58□□□□□ -2
RNU6-239P-201ENST00000390990 CMTM4Q8IZR5 234 aa2.58□□□□□ -2
RNU6-239P-201ENST00000390990 CELF2-AS1Q8N7Q2 184 aa2.58□□□□□ -2
RNU6-239P-201ENST00000390990 DLG3Q92796 817 aa2.58□□□□□ -2
RNU6-239P-201ENST00000390990 ERCC4Q92889 916 aaPredicted RBP2.58□□□□□ -2
RNU6-239P-201ENST00000390990 CAVIN3Q969G5 261 aa2.58□□□□□ -2
RNU6-239P-201ENST00000390990 FOXRED1Q96CU9 486 aaPredicted RBP2.58□□□□□ -2
RNU6-239P-201ENST00000390990 COQ10AQ96MF6 247 aa2.58□□□□□ -2
RNU6-239P-201ENST00000390990 ZNF778Q96MU6 729 aa2.58□□□□□ -2
RNU6-239P-201ENST00000390990 CPEB1Q9BZB8 566 aaKnown RBP2.58□□□□□ -2
RNU6-239P-201ENST00000390990 KCNH7Q9NS40 1196 aa2.58□□□□□ -2
RNU6-239P-201ENST00000390990 TRAV20A0A0B4J274 112 aa2.57□□□□□ -2
RNU6-239P-201ENST00000390990 AQP7O14520 342 aa2.57□□□□□ -2
RNU6-239P-201ENST00000390990 CFBP00751 764 aa2.57□□□□□ -2
RNU6-239P-201ENST00000390990 JUNP05412 331 aaKnown RBP2.57□□□□□ -2
RNU6-239P-201ENST00000390990 SSBP05455 408 aaKnown RBP eCLIP2.57□□□□□ -2
RNU6-239P-201ENST00000390990 HKR1P10072 659 aa2.57□□□□□ -2
RNU6-239P-201ENST00000390990 APOBEC3AP31941 199 aaPredicted RBP2.57□□□□□ -2
RNU6-239P-201ENST00000390990 RGS3P49796 1198 aa2.57□□□□□ -2
RNU6-239P-201ENST00000390990 ZNF81P51508 661 aa2.57□□□□□ -2
RNU6-239P-201ENST00000390990 NPEPPSP55786 919 aa2.57□□□□□ -2
RNU6-239P-201ENST00000390990 GUCY1A3Q02108 690 aa2.57□□□□□ -2
RNU6-239P-201ENST00000390990 NHLH1Q02575 133 aa2.57□□□□□ -2
RNU6-239P-201ENST00000390990 TMEM132BQ14DG7 1078 aa2.57□□□□□ -2
RNU6-239P-201ENST00000390990 ERCC6LQ2NKX8 1250 aa2.57□□□□□ -2
RNU6-239P-201ENST00000390990 DPH6Q7L8W6 267 aa2.57□□□□□ -2
RNU6-239P-201ENST00000390990 RTN4RL1Q86UN2 441 aaPredicted RBP2.57□□□□□ -2
RNU6-239P-201ENST00000390990 OR5AN1Q8NGI8 311 aa2.57□□□□□ -2
RNU6-239P-201ENST00000390990 C1QTNF7Q9BXJ2 289 aa2.57□□□□□ -2
RNU6-239P-201ENST00000390990 AKIP1Q9NQ31 210 aa2.57□□□□□ -2
RNU6-239P-201ENST00000390990 TRPM5Q9NZQ8 1165 aa2.57□□□□□ -2
RNU6-239P-201ENST00000390990 PCDHA9Q9Y5H5 950 aa2.57□□□□□ -2
RNU6-239P-201ENST00000390990 B3GALT1Q9Y5Z6 326 aa2.57□□□□□ -2
RNU6-239P-201ENST00000390990 SALL3Q9BXA9 1300 aa2.57□□□□□ -2
RNU6-239P-201ENST00000390990 PIPSLA2A3N6 862 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms